Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2399 ATGGGGTTGTATGGAATTGATTGCTTGTTACTTGCCTTTATTTTGTTCTCTCTTATTGTTCTGGCCAGTGCCTTGGACACCATCACATCATCTTCGTTGATCCAAGAGCCTCAAACAATAAGCTCAAATAATAGCAGGTTCACCCTAGGATTCTTCAGTCCTCAAAATTCCACCAATCGCTACTTAGGAATTTGGTTTATGTCTGAGTCGCATACTGTTTGGGAAGCTAATAGAAACAACCCACTAATGGATTCTTCTGGGATTCTCACAATATCAGAGAATGGAAATCTCGTTGTCATCAATGGACAAAAACATGTTCTCTGGTCAACAAATGTCTCACATGTTGCATCAAATTCCAGTGCTCAACTCTTAGATTCCGGCAACCTTGTCCTCGCAGATGGAATTACTGGAGCATTCGTGTGGCAGAGTTTCCAGCATCCTTGTAATGCATTACTGCAAGACATGAAACTGAGTATCAACAAGAAAACAGGCGAGAAAGTGAAACTTATATCATGGAAAACTTTATCTGATGCAGCCTATGGAGGATTTTCTTGCAGTCTTGAACCTCGTGCTAATGTCACTGAACTATTCGTATGGAAAGGAAATCATCCTTATTGGCGCAGTGGTCCTTGGAATGGTACAAAATTTCTCGGGGTATCTCAGAATTCATCTGTATCCTTGAATGAGTTCAAGATGAAAGGTGATGAGGAAGGCAATTTTGACTTGTATTTTCATTACTCAGACAACTCAGTATTACTAACTCTTAGGTTAAGTTATCAAGGTAAAATAAGAATACAACGTTGGAATTCCCAGTCATATATATGGGAAATTGAATGGCTAAACGTGAATTCCGATTGTGATATTTATGGCCATTGTGGCCCATTTGGGATCTGCAATCCTTCGAGCTCGCCGATATGCAGCTGCTTGGGAGGGTTTGAACCCAAGAACAAAGAAGAATGGGGAAGACAGAACTGGACCAGCGGGTGTGTGAGAAGAGAAACACTTCAGTGTGAGAAAGACAAAAATGGTTCTCAAGCTAGCAAAATAGATGAGTTTATTAAGCTAGAGAGGGTAAAACTGCCTGATCGTGCACAAGTGTTACCTTTTGATGACTTTAAGGATAGTAATGGAGATTGTCAAACTCAGTGCCTGAAGAATTGCTCTTGTTTAGCTTATGCCTATGATAGAAGCCTTGGCTGTATGGTTTGGAATGCAGATTTACTTGACATACAAAACTTCTCAGCTGGAGGGGTTGATTTTTACATGCGTTTAGCCCACTTAGAGCAAGGTATAGGCAAGAGGAAAATGACAACACCTATCATCATATCAACTCTAATTGGAACAATTCTCATTACTTCCTTTGGGTATTTTTTGTGGAAAAAATGGTCAAAGCAAAAAGGGGAAATGCATATGCAAATTCAAAACAAGAGAAGGATGATGCAAGTCAAAATTCAAGAGCTACCATTAATTGGTTTTAGAAAGTTAGCAATTGCAACAAACAACTTTGACTTGGCAAATAAACTTGGGCAGGGTGGTTTTGGTCCAGTTTACAAGGGAATGTTAAGAGATGGAAAAGAAATAGCAGTGAAAAGACTATCAAGATTATCTGGGCAAGATCCATTGCAACAAAAATCTTTAGATTGGGGAAAGCGCTTCAATATAATTGAAGGAATAGCTAGAGGATTGCTCTATCTTCATAGAGATTCAAGATTAAGAATCATACATAGAGATTTGAAGGCAAGTAACATATTATTGGATGAACAGATGAATCCAAAAATATCAGATTTTGGGATAGCTAAACTTTTTGAAGGTGGTAAAGATCAAGCAAACACAACAAGAATTGTTGGTACATATGGCTATATTTCTCCAGAATATGCAACTGAAGGACTTTATTCAGAGAAATCTGATGTCTTTAGCTTTGGTGTTTTGTTGCTAGAGATTATTAGTGGCAGAAAAAACACAAGCTTTTATGAAGATATAGAATCCTTGACACTTTTAGGATTTGCGTGGAAATTATGGATTGATGCCAATATTGTCCCTCTAATAGATCCACATATATATGATCCAATCTTTCATAAGGACATATTGAGGTACGTGCAAATAGGTCTTCTATGTGTGCAAGAACTTGCAAAAGAGAGGCCTACTATGGCCATCGTTTTATCGATGCTTCAAAGTGAGATTATTGATATTCCTTCTCCAAGCCAGCCTGCATTCATTCTCAGGCAGACCTTGTCTCATACTTCAAAGCAAGTTTCAAAAACTGGTGACTCATGTTCCATCAACAATGTAACTATCTCAAAATTTGTAGGGAGATAG 2316 0.383 MGLYGIDCLLLAFILFSLIVLASALDTITSSSLIQEPQTISSNNSRFTLGFFSPQNSTNRYLGIWFMSESHTVWEANRNNPLMDSSGILTISENGNLVVINGQKHVLWSTNVSHVASNSSAQLLDSGNLVLADGITGAFVWQSFQHPCNALLQDMKLSINKKTGEKVKLISWKTLSDAAYGGFSCSLEPRANVTELFVWKGNHPYWRSGPWNGTKFLGVSQNSSVSLNEFKMKGDEEGNFDLYFHYSDNSVLLTLRLSYQGKIRIQRWNSQSYIWEIEWLNVNSDCDIYGHCGPFGICNPSSSPICSCLGGFEPKNKEEWGRQNWTSGCVRRETLQCEKDKNGSQASKIDEFIKLERVKLPDRAQVLPFDDFKDSNGDCQTQCLKNCSCLAYAYDRSLGCMVWNADLLDIQNFSAGGVDFYMRLAHLEQGIGKRKMTTPIIISTLIGTILITSFGYFLWKKWSKQKGEMHMQIQNKRRMMQVKIQELPLIGFRKLAIATNNFDLANKLGQGGFGPVYKGMLRDGKEIAVKRLSRLSGQDPLQQKSLDWGKRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEQMNPKISDFGIAKLFEGGKDQANTTRIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFYEDIESLTLLGFAWKLWIDANIVPLIDPHIYDPIFHKDILRYVQIGLLCVQELAKERPTMAIVLSMLQSEIIDIPSPSQPAFILRQTLSHTSKQVSKTGDSCSINNVTISKFVGR 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2399 771 PIRSF SRK 3 541 IPR024171 GO:0004674
Prci11g2399 771 PIRSF SRK 539 771 IPR024171 GO:0004674
Prci11g2399 771 Pfam PAN-like domain 347 410 IPR003609 -
Prci11g2399 771 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 714 - -
Prci11g2399 771 CDD B_lectin 38 147 IPR001480 -
Prci11g2399 771 SUPERFAMILY Protein kinase-like (PK-like) 484 723 IPR011009 -
Prci11g2399 771 Gene3D - 20 146 IPR036426 -
Prci11g2399 771 Gene3D Phosphorylase Kinase; domain 1 459 541 - -
Prci11g2399 771 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Prci11g2399 771 SMART blect_4 31 147 IPR001480 -
Prci11g2399 771 ProSiteProfiles Protein kinase domain profile. 407 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2399 771 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 533 731 - -
Prci11g2399 771 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 144 - -
Prci11g2399 771 CDD PAN_AP_plant 334 425 - -
Prci11g2399 771 SMART ntp_6 347 424 IPR003609 -
Prci11g2399 771 Pfam Protein kinase domain 547 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2399 771 Pfam D-mannose binding lectin 72 173 IPR001480 -
Prci11g2399 771 ProSiteProfiles PAN/Apple domain profile. 337 425 IPR003609 -
Prci11g2399 771 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 213 IPR036426 -
Prci11g2399 771 SMART serkin_6 502 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2399 771 Gene3D Transferase(Phosphotransferase) domain 1 542 727 - -
Prci11g2399 771 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Prci11g2399 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2399 Prci-Chr11 26844590 26848585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2399 492 771 Receptor kinase-like Gene Family AT4G23280 49.823 1.58e-85 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2399 Pkinase 2.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2399 - - qsa:O6P43_012540 862.062