Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2398 ATGGGGTTGTATGGAATTGATTGCTTGTTACTTGCCTTTATTTTGTTCTCTCTTATTGTTCTGGCCAGTGCCTTGGACACCATCACATCATCTTCGTTGATCCAAGAGCCTCAAACAATAAGCTCAAATAATAGCAGGTTCACCCTAGGATTCTTCAGTCCTCAAAATTCCACCAATCGCTACTTAGGAATTTGGTTTATGTCTGAGTCGCATACTGTTTGGGAAGCTAATAGAAACAACCCACTAATGGATTCTTCTGGGATTCTCACAATATCAGAGAATGGAAATCTCGTTGTCATCAATGGACAAAAACATGTTCTCTGGTCAACAAATGTCTCACATGTTGCATCAAATTCCAGTGCTCAACTCTTAGATTCCGGCAACCTTGTCCTCGCAGATGGAATTACTGGAGCATTCGTGTGGCAGAGTTTCCAGCATCCTTGTAATGCATTACTGCAAGACATGAAACTGAGTATCAACAAGAAAACAGGCGAGAAAGTGAAACTTATATCATGGAAAACTTTATCTGATGCAGCCTATGGAGGATTTTCTTGCAGTCTTGAACCTCGTGCTAATGTCACTGAACTATTCGTATGGAAAGGAAATCATCCTTATTGGCGCAGTGGTCCTTGGAATGGTACAAAATTTCTCGGGGTATCTCAGAATTCATCTGTATCCTTGAATGAGTTCAAGATGAAAGGTGATGAGGAAGGCAATTTTGACTTGTATTTTCATTACTCAGACAACTCAGTATTACTAACTCTTAGGTTAAGTTATCAAGGTAAAATAAGAATACAACGTTGGAATTCCCAGTCATATATATGGGAAATTGAATGGCTAAACGTGAATTCCGATTGTGATATTTATGGCCATTGTGGCCCATTTGGGATCTGCAATCCTTCGAGCTCGCCGATATGCAGCTGCTTGGGAGGGTTTGAACCCAAGAACAAAGAAGAATGGGGAAGACAGAACTGGACCAGCGGGTGTGTGAGAAGAGAAACACTTCAGTGTGAGAAAGACAAAAATGGTTCTCAAGCTAGCAAAATAGATGAGTTTATTAAGCTAGAGAGGGTAAAACTGCCTGATCGTGCACAAGTGTTACCTTTTGATGACTTTAAGGATAGTAATGGAGATTGTCAAACTCAGTGCCTGAAGAATTGCTCTTGTTTAGCTTATGCCTATGATAGAAGCCTTGGCTGTATGGTTTGGAATGCAGATTTACTTGACATACAAAACTTCTCAGCTGGAGGGGTTGATTTTTACATGCGTTTAGCCCACTTAGAGCAAGATCCATTGCAACAAAAATCTTTAGATTGGGGAAAGCGCTTCAATATAATTGAAGGAATAGCTAGAGGATTGCTCTATCTTCATAGAGATTCAAGATTAAGAATCATACATAGAGATTTGAAGGCAAGTAACATATTATTGGATGAACAGATGAATCCAAAAATATCAGATTTTGGGATAGCTAAACTTTTTGAAGGTGGTAAAGATCAAGCAAACACAACAAGAATTGTTGGTACATATGGCTATATTTCTCCAGAATATGCAACTGAAGGACTTTATTCAGAGAAATCTGATGTCTTTAGCTTTGGTGTTTTGTTGCTAGAGATTATTAGTGGCAGAAAAAACACAAGCTTTTATGAAGATATAGAATCCTTGACACTTTTAGGATTTGCGTGGAAATTATGGATTGATGCCAATATTGTCCCTCTAATAGATCCACATATATATGATCCAATCTTTCATAAGGACATATTGAGGTACGTGCAAATAGGTCTTCTATGTGTGCAAGAACTTGCAAAAGAGAGGCCTACTATGGCCATCGTTTTATCGATGCTTCAAAGTGAGATTATTGATATTCCTTCTCCAAGCCAGCCTGCATTCATTCTCAGGCAGACCTTGTCTCATACTTCAAAGCAAGTTTCAAAAACTGGTGACTCATGTTCCATCAACAATGTAACTATCTCAAAATTTGTAGGGAGATAG 1989 0.3876 MGLYGIDCLLLAFILFSLIVLASALDTITSSSLIQEPQTISSNNSRFTLGFFSPQNSTNRYLGIWFMSESHTVWEANRNNPLMDSSGILTISENGNLVVINGQKHVLWSTNVSHVASNSSAQLLDSGNLVLADGITGAFVWQSFQHPCNALLQDMKLSINKKTGEKVKLISWKTLSDAAYGGFSCSLEPRANVTELFVWKGNHPYWRSGPWNGTKFLGVSQNSSVSLNEFKMKGDEEGNFDLYFHYSDNSVLLTLRLSYQGKIRIQRWNSQSYIWEIEWLNVNSDCDIYGHCGPFGICNPSSSPICSCLGGFEPKNKEEWGRQNWTSGCVRRETLQCEKDKNGSQASKIDEFIKLERVKLPDRAQVLPFDDFKDSNGDCQTQCLKNCSCLAYAYDRSLGCMVWNADLLDIQNFSAGGVDFYMRLAHLEQDPLQQKSLDWGKRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEQMNPKISDFGIAKLFEGGKDQANTTRIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFYEDIESLTLLGFAWKLWIDANIVPLIDPHIYDPIFHKDILRYVQIGLLCVQELAKERPTMAIVLSMLQSEIIDIPSPSQPAFILRQTLSHTSKQVSKTGDSCSINNVTISKFVGR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2398 662 SMART serkin_6 392 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2398 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Prci11g2398 662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 144 - -
Prci11g2398 662 Pfam D-mannose binding lectin 72 173 IPR001480 -
Prci11g2398 662 SUPERFAMILY Protein kinase-like (PK-like) 431 614 IPR011009 -
Prci11g2398 662 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 213 IPR036426 -
Prci11g2398 662 CDD B_lectin 38 147 IPR001480 -
Prci11g2398 662 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 428 - -
Prci11g2398 662 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Prci11g2398 662 ProSiteProfiles Protein kinase domain profile. 211 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2398 662 SMART blect_4 31 147 IPR001480 -
Prci11g2398 662 Gene3D - 20 145 IPR036426 -
Prci11g2398 662 CDD PAN_AP_plant 334 425 - -
Prci11g2398 662 SMART ntp_6 347 424 IPR003609 -
Prci11g2398 662 Pfam PAN-like domain 347 410 IPR003609 -
Prci11g2398 662 Pfam Protein kinase domain 433 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2398 662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 421 622 - -
Prci11g2398 662 Gene3D Transferase(Phosphotransferase) domain 1 424 621 - -
Prci11g2398 662 ProSiteProfiles PAN/Apple domain profile. 337 425 IPR003609 -
Prci11g2398 662 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2398 Prci-Chr11 26844590 26848586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2398 430 632 Receptor kinase-like Gene Family AT4G23150 56.158 4.37e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2398 Pkinase 8.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2398 - - cqi:110693493 632.484