Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2396 ATGGGATTACTGCCTATTTTTCTCATACTGTTAAGCTTCTGTGTAGGTTTGATTACATCCTTCGAATCGATTACATCGTCTGTATTCATCAGAGATTCAGAAACTGTAAGCTCAAACAACAGAGCATTCAAACTTGGATTCTTCAGCCCCAAAAATACAACAGATCGCTATGTAGGAATTTGGTATGTCTCCAATTTCAAAGTCATATGGGCGGCCAACAGAAACCAACCACTGCGGGATTCTTCTGGGATCATTACCATATCTGAGAACAACAATCTTGTACTGTTGAATGGAAAGAAAGAGGTTTTTTGGACATCAAATGTAACAAACAGAGCATCAAGTTCGACCGCCCAACTTCTTAATTCCGGTAACCTTGTGCTGATAGACCACACAGGCAAGACATTATGGGAGAGTTTCCGACATCCAAGTGACACAGACCATTCAAATTTGGTAATTAGTGCACACCAGAAAACAGGTACATCAAGAAAAAATCTTTCTGGAAGAAAATTGGCCTACATCAGCAGAATAAACAAAGTTGGAAAGCAAAGGGTTCAAGAAAACTGTGATACTTACAATTACTGTGGGGCATATGGAATCTGTGACTCCAATAATTCACCAATCTGCAACTGTTTGAGAGGGTTTGAGCCAAGGAATACCAAGGAATGGAATGACCAAAATTGGACTAGTGGGTGCGTGAGGAGAGCGTCACTGCAGTGTGCAAGTAACGGAAGCAAAAACGATTGGTTTCTGGAGCTGCAGATGACAAAAGTTCCCGAACATTCAACAGCATCATTTGTTTCTGAGGACACATGCAGAACTCAATGCATAAATAATTGCAATTGTACAGCATATGCATATGTTTCTTCTCTTTCCTGCATGTACTGGACTGGAAACTTAACGGACATAGTAAGACAGCCTGGTGGAGGAATTAATCTCTACATACGCCAAGCCAATTCAGAACTTGGTAGGAAGAAGAAAGACGTCAAAGTAGTTATCGCAGTAACAGTGATCATAGGAGTGATTATCGTTACCATCTGTGCTTATATCTTAAAGGCATGGGCTGCTAAGTATTCTGCAAGAAAAAAGGAGAGCAAGGCAAAAATATTGCTGAACAAAGAAGAATACCAACTTGGAGACCTGAAAATTGCTAAACTTGAGAAGCTACCACTGTTTGATTTTAGAATCATCGCAACTGCAACGAACGACTTCAGCATTGCTAATAAGCTTGGAAGGGGTGGTTTTGGCTTAGTGTACAAGGGAGAATTACATGATGGGCAGGAAATAGCAGTGAAAAGACTCTCAAAAACTTCTAGACAAGGGCTGGAAGAATTCATGAATGAAGTGATTGTGATTTCAAAGCTTCAACATCGTAATCTTGTAAGACTTCTAGGATGCTGCATTGAAGGAGATGAAAAAATGTTGGTATATGAGTACATGCCTAACAAGAGTTTGGATGCTTTTATATATGATCCAGTCAAAAAAAAGGTTTTAGATTGGAAAAACCGCTTGAACATTATCAAAGGAATTGCTCGTGGTTTACTTTATCTCCACAGAGATTCTAGACTAAAAATTATACATAGAGACCTAAAGCCAAGTAATATCTTACTAGATGCACAACTTAATCCTAAAATATCAGACTTCGGTTTGGCAAGAATCTTTGAAAGTAGTGAAGACGAAGGCAATACTCGAAGGGTTGTTGGAACATACGGTTATATGTCACCTGAATATGCAATGGAAGGGCTATTTTCAGAGAAATCAGATGTTTTTAGCTTTGGAGTTTTGCTATTTGAGATCATCAGTGGTAGGAAAAATACAAGCATTTGTGATCATGAACAATCATTGAACCTCTTGGAACATGCATGGAAATTATGGAATGAAGAAAACATTGAATCTCTCATAGACTTGGAAATATCTGATCCAGACCATGTCAATGACATTTTGAGATGCATACACATAGGATTTTTATGTGCTCAAGAACATGCAAGAGATAGGCCTTCTATGACCACCGTAAATTCAATGCTTAACAATCATATTGTTGATCTTCCTCCATCATGTCAGCCCGCATACATACAGAGGAAGGTTGTGACAAGTGCAGAGTCATCTCAACAGAGCAATAGGTCATGCTCTGTTAATAGTGTCACTCTCACAAACATGCAAGGGTTGTTTAGAACCAAACTACTGGGTATTCTCAACTTTCTTCTCAATCAGTTCCTAAGTAGCATTGATAGTCAAGTGGAAATGAGCACTTCCATCACAGCAGTAAGTTGTGCGAATGAACGGATGGTGTAGTGCCAATCCCTCAAAGACGGCGATGTTTTACTCTCCAATGGAGGAACCTTTGCCCTCGGTTTCTTCAGACCCAGCAACGATTCAAGAAATCGCTACGTTGGAATATGGTATCGTAGATCCACCAAACCAACCGTTGTGTGGGTAGCTAATAGAGAGAATCCTCTCAATGATACTTCTGGTGTTTTGTCGATTAATACCCATGGAAACATCGTTCTCGTTTACAATGATACGGATTTGAACCGAATTAGCTCCATTTGGTCTTCAAATGTTTCGATCACATCTTCTAGTCACACCTTTGCAATGCTTCAAGACACAGGAAACTTGGTCTTGATCGGAAATGAAGGTAGACCAAAGGTTCAATGGCAGAGTTTTGACTATCCCGGCGACACACTGGTTCCGTTCATGAAAATTGGGGTGGACCGGAAAACCGGGTTCAAATGGTTCCTTACCTCATGGAAATCCCCAGACGACCCAGGGTTGGGGAACGTGAGCCACATAATCGACCCCACAGGCTATCCTCAAATGTTCGTTTATAAAAATGGAGTCCCATTTTGGCGGGGCGGGTCTTGGACTGGTCAAAGATGGAGCGGTATACCTCAAATGACACCCAACTTCATCTTCAACGTCTCCTTTGTTGACGATGCCAATGAAGTTAGCACGGTGACTCGAATCGTGGACCCTTCGGTGTTCTTAAGAATGGTGCTGGACAACACTGGTCATGAGACAAGAACTATATGGCAAGCTAAGGAGAATAGATGGCTCCAAGTATGGTACGGTCCAACAGAGGACTGTGACCACTATCGCCGATGCGGGTCAAATAGTAAGTGCGACCCGCACAACGAGGACAAGTTTGAGTGTGTGTGCTTGCCCGGATTCGAACCCATGAATCCACAAGAGTGGGATATGAGGAACGGGTCAAGTGGGTGCGTGAGGAAGAAGAATGTATCCACGTGTCAAAGCGGGGAGGGATTTGTGAAGGTGCCACGTGTGAAGGTTCCCGACACGTCGAAGGCACGTGCAAACAAGAGTGAGAGTATGAGCTTCAAAGAGTGTGAGGAGAAGTGCTTGGAGGATTGTTCATGTGTAGCGTACACAAGTGTAGATGAGGTCAAACAAAGTGGGTGCTTGACGTGGCATGATAACATGGAAGACATCAGAACATACAACGATGTGGGGCAAGATTTGTATGTGCGCGTAGACGCAGATGAATTGGCTAAATATGAAAGAAAGCATTATGGTTCTCTTGGCAAGAAAGGGATGGTAACACTCACAGTCATTTCTATTTGTCTGATAACGTTCCTGGCGATCTCTTTTGCGTATTGGTTTGTAAAGAAAAAGAATCAAGCAAAAAGAAGGAACAACCAATATTTGTTTGATGGAGAAAATAATTCCAATTTACCTCTCTTCGATCTAAAGGACATAGTTGAGGCAACAAACAATTTCTCAGACGCTAATATGCTTGGAAAAGGTGGCTTTGGCTATGTATACAAGGGTCTACTCAAAGATGGAATGGAAATAGCAGTAAAGAGGCTATCAAAGTATTCTGGACAAGGCATCGAAGAATTCAAAAATGAGGTTACTTTAATTGCAAAGCTCCAACATAAAAATCTTGTGAGGATCTTAGGTTGTTGCATTGATGGAGAAGAGAAAATGTTGATATATGAATATTTGCCAAACAAAAGCTTGGACTCTTTCATTTTTGATTGGAGGAAAAGATTTGACATTATTTGTGGAGTTGCAAGAGGAATTTTATACCTTCATCAAGATTCAAGATTAAGAATAATTCATAGAGATTTAAAGGCCAGCAACGTCTTGTTAGATTCTGAAATGAATCCAAAAATTGCTGATTTTGGAATGGCTAGAATATTTGGTGGAGACCAAATTGAAGCAAATACAAATCGTGTTGTTGGAACCTATGGTTATATGTCTCCTGAATATGTAATGGAAGGAATTTTCTCAATAAAATCAGATGCATATAGCTTTGGAGTTTTACTTTTGGAGATTATTACTAGTAGAAAGAATAGTGGTCACTATGATGATATTTCTTCTCCTTTGGTTGGGCATATTTGGGATCTTTGGAGAGAAAGTAGAGCTATGCAGATTGTTGATCGATCATTAATAGGTGAGTCATGCCCTGAACATGAAGTTCTGAAATGCATACAGATTGGGCTTTTATGCGTGCAAGAATATGCAACAGATAGGCCAACAATGTTTGAAGTTGTTTCCATGTTGGATAGTAGTGACTCAACTCTTCCTCCTCCAAATCAACCCACATTTCTTTTGAAGAAAACTAATTGTGATGCAAATCCATCAATAAGTGGAGGGGTTAATTCAATAAATGAGATGAGTACTACTGTGGTTGAAGCTCGCTGA 4662 0.4043 MGLLPIFLILLSFCVGLITSFESITSSVFIRDSETVSSNNRAFKLGFFSPKNTTDRYVGIWYVSNFKVIWAANRNQPLRDSSGIITISENNNLVLLNGKKEVFWTSNVTNRASSSTAQLLNSGNLVLIDHTGKTLWESFRHPSDTDHSNLVISAHQKTGTSRKNLSGRKLAYISRINKVGKQRVQENCDTYNYCGAYGICDSNNSPICNCLRGFEPRNTKEWNDQNWTSGCVRRASLQCASNGSKNDWFLELQMTKVPEHSTASFVSEDTCRTQCINNCNCTAYAYVSSLSCMYWTGNLTDIVRQPGGGINLYIRQANSELGRKKKDVKVVIAVTVIIGVIIVTICAYILKAWAAKYSARKKESKAKILLNKEEYQLGDLKIAKLEKLPLFDFRIIATATNDFSIANKLGRGGFGLVYKGELHDGQEIAVKRLSKTSRQGLEEFMNEVIVISKLQHRNLVRLLGCCIEGDEKMLVYEYMPNKSLDAFIYDPVKKKVLDWKNRLNIIKGIARGLLYLHRDSRLKIIHRDLKPSNILLDAQLNPKISDFGLARIFESSEDEGNTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLFEIISGRKNTSICDHEQSLNLLEHAWKLWNEENIESLIDLEISDPDHVNDILRCIHIGFLCAQEHARDRPSMTTVNSMLNNHIVDLPPSCQPAYIQRKVVTSAESSQQSNRSCSVNSVTLTNMQGLFRTKLLGILNFLLNQFLSSIDSQVEMSTSITAVSCANERMVXCQSLKDGDVLLSNGGTFALGFFRPSNDSRNRYVGIWYRRSTKPTVVWVANRENPLNDTSGVLSINTHGNIVLVYNDTDLNRISSIWSSNVSITSSSHTFAMLQDTGNLVLIGNEGRPKVQWQSFDYPGDTLVPFMKIGVDRKTGFKWFLTSWKSPDDPGLGNVSHIIDPTGYPQMFVYKNGVPFWRGGSWTGQRWSGIPQMTPNFIFNVSFVDDANEVSTVTRIVDPSVFLRMVLDNTGHETRTIWQAKENRWLQVWYGPTEDCDHYRRCGSNSKCDPHNEDKFECVCLPGFEPMNPQEWDMRNGSSGCVRKKNVSTCQSGEGFVKVPRVKVPDTSKARANKSESMSFKECEEKCLEDCSCVAYTSVDEVKQSGCLTWHDNMEDIRTYNDVGQDLYVRVDADELAKYERKHYGSLGKKGMVTLTVISICLITFLAISFAYWFVKKKNQAKRRNNQYLFDGENNSNLPLFDLKDIVEATNNFSDANMLGKGGFGYVYKGLLKDGMEIAVKRLSKYSGQGIEEFKNEVTLIAKLQHKNLVRILGCCIDGEEKMLIYEYLPNKSLDSFIFDWRKRFDIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSEMNPKIADFGMARIFGGDQIEANTNRVVGTYGYMSPEYVMEGIFSIKSDAYSFGVLLLEIITSRKNSGHYDDISSPLVGHIWDLWRESRAMQIVDRSLIGESCPEHEVLKCIQIGLLCVQEYATDRPTMFEVVSMLDSSDSTLPPPNQPTFLLKKTNCDANPSISGGVNSINEMSTTVVEAR 1553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2396 1553 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 758 1498 - -
Prci11g2396 1553 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 753 887 - -
Prci11g2396 1553 ProSiteProfiles PAN/Apple domain profile. 1081 1163 IPR003609 -
Prci11g2396 1553 ProSiteProfiles Protein kinase domain profile. 1244 1522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2396 1553 ProSiteProfiles Protein kinase domain profile. 403 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2396 1553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Prci11g2396 1553 SUPERFAMILY Protein kinase-like (PK-like) 388 707 IPR011009 -
Prci11g2396 1553 ProSiteProfiles EGF-like domain profile. 1023 1061 IPR000742 -
Prci11g2396 1553 SMART ntp_6 243 316 IPR003609 -
Prci11g2396 1553 SMART ntp_6 1082 1162 IPR003609 -
Prci11g2396 1553 Gene3D Transferase(Phosphotransferase) domain 1 1319 1515 - -
Prci11g2396 1553 Gene3D Transferase(Phosphotransferase) domain 1 479 681 - -
Prci11g2396 1553 CDD PAN_AP_plant 1079 1162 - -
Prci11g2396 1553 ProSitePatterns Protein kinases ATP-binding region signature. 409 431 IPR017441 GO:0005524
Prci11g2396 1553 SUPERFAMILY Protein kinase-like (PK-like) 1222 1507 IPR011009 -
Prci11g2396 1553 CDD STKc_IRAK 1250 1508 - -
Prci11g2396 1553 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1320 1515 - -
Prci11g2396 1553 CDD STKc_IRAK 409 676 - -
Prci11g2396 1553 Pfam PAN-like domain 243 302 IPR003609 -
Prci11g2396 1553 Pfam PAN-like domain 1081 1147 IPR003609 -
Prci11g2396 1553 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 139 - -
Prci11g2396 1553 Pfam S-locus glycoprotein domain 948 1058 IPR000858 GO:0048544
Prci11g2396 1553 Pfam S-locus glycoprotein domain 183 217 IPR000858 GO:0048544
Prci11g2396 1553 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 682 - -
Prci11g2396 1553 CDD B_lectin 765 890 IPR001480 -
Prci11g2396 1553 CDD PAN_AP_plant 237 315 - -
Prci11g2396 1553 SMART serkin_6 403 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2396 1553 SMART serkin_6 1244 1514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2396 1553 Gene3D Phosphorylase Kinase; domain 1 1203 1318 - -
Prci11g2396 1553 Gene3D Phosphorylase Kinase; domain 1 379 478 - -
Prci11g2396 1553 CDD B_lectin 27 142 IPR001480 -
Prci11g2396 1553 SUPERFAMILY alpha-D-mannose-specific plant lectins 808 921 IPR036426 -
Prci11g2396 1553 ProSiteProfiles PAN/Apple domain profile. 239 317 IPR003609 -
Prci11g2396 1553 ProSitePatterns Protein kinases ATP-binding region signature. 1250 1272 IPR017441 GO:0005524
Prci11g2396 1553 Gene3D - 19 139 IPR036426 -
Prci11g2396 1553 Gene3D - 752 887 IPR036426 -
Prci11g2396 1553 ProSiteProfiles Bulb-type lectin domain profile. 758 886 IPR001480 -
Prci11g2396 1553 ProSiteProfiles Bulb-type lectin domain profile. 21 140 IPR001480 -
Prci11g2396 1553 Pfam Protein tyrosine and serine/threonine kinase 1248 1507 IPR001245 GO:0004672|GO:0006468
Prci11g2396 1553 Pfam Protein tyrosine and serine/threonine kinase 405 629 IPR001245 GO:0004672|GO:0006468
Prci11g2396 1553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1357 1369 IPR008271 GO:0004672|GO:0006468
Prci11g2396 1553 Pfam D-mannose binding lectin 68 166 IPR001480 -
Prci11g2396 1553 Pfam D-mannose binding lectin 807 916 IPR001480 -
Prci11g2396 1553 SMART blect_4 27 142 IPR001480 -
Prci11g2396 1553 SMART blect_4 764 890 IPR001480 -
Prci11g2396 1553 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1208 1319 - -
Prci11g2396 1553 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 368 478 - -
Prci11g2396 1553 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 159 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2396 Prci-Chr11 26740502 26785058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2396 363 709 Receptor kinase-like Gene Family AT4G23140 54.802 1.92e-118 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2396 PK_Tyr_Ser-Thr 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2396 - - pcin:129284814 3115.09