Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2394 ATGTGCTTACTATTTTTCATCTTTAGCTGTGGCTTAGATACTCTTACGGCATCTGAGAGCATGAAAGATCCTGATACCCTTACCTCTGATAGCACCAATTTCACACTTGGATTTTTCAGCCCTGAGAATTCATCCAATCGTTACCTAGGAATTTGGTACGTGTTAAAAACCACTGTGGTATGGGTGGCTAACAGAAACGAACCTCTCACAGATTCTCCTGGGATTCTGAAGATATCTGAGAATGGCAATCTTGTCATGCTAGATGGAGAGGAACATGTTGTTTGGTCATCAGATGGATCAGACAATGACACGTCCCATGTCATCTTGCAGCTTCAGGATTCTGGAAATCTTGTGGTGCAGAACAACATCACAGGAATAGTGATCTGGCAAAGCTTCCACCATCTTTCTAATACAATACTGCAACGCACTAATGGTGGTTTTAATGCACAAACAGGTCAGAAATTCATGTTGACATCATGGAAGAGCCCTTCTGATCCATCCGTGGGAAGCTTTACAGCTTATATGGGACAGAGTACAGTTCCTCAACTGTTCGTTTGGAACAACAGTCACCCGTATTGGCGTGGAGGTCCGTGGAATGGTCAAATCTTCACTGGCATACCGAATTTGAATAATCAGTATCTCAATGGATTAACTTTTCAGAAAGAAAATGGTACTTTCTATTTACATTTTGTATATATAAACCTGTCACCTTCATCATTCTATATGTTGAACTTTGAAGGGATATTGGTATTTAATAGTTGGGATGACAATAAGAAAGAGTGGGTGCCTCAATGGACAGTACAGCAATCAGACTGTGACCTTTATGGTATTTGTGGATCTTTTGGAAGCTGTGATCCACACAGAAAGCCAATTTGTAGCTGTTTGAGAGGTTTTGTACCAAGAAATACAGAAGAATGGAATAAAGGAAACTGGACTAGTGGGTGTGTAAGGAGGAAACCATTGAAGTGTGACAGGGTCAAAAATGAAACCAGGAATGGATATAATTATGATGATGATGATGATGATGATGATGGGTTTGCGCAATTAGAGAATACCAAAGTTCCAGACCTAGTAAATTGGACTCTCATTGCATCAGCATCACCAGATTGCAGAATCCAGTGCTTGAACAATTGTTCCTGCTTAGCATATGCCTATGATGCTGGCATTGGTTGTATGATGTGGAGTGAAAATCTTATTGACATACAAAGGTTCTCAAGTGGTGGCCTCGAACTATACATTCGACTGGCAAATTCAGAACTAAAAGTAAAGAGTAAGAGCAAATTAGCAGTGACAATTTCAATTCCATTGACAATAGGAACAATTCTTATCGCAGCTTTTGCATATATCATGTGGAGACGTTCTGCTAAACATCAAGAAACAGAAGAACCATTAACAATAGTAGACGATGAAATCTCTAGTGAGATGCTAAAGGAACTACCACTGTTTGAATTTGAAAAGCTCGCAGTCGCAACCAACAACTTTCATTCTGCTAATAAGATTGGACAGGGTGGTTTTGGCCCAGTATACAAAGGAAAATTGCAAGATGGACAAGAAGTTGCAGTTAAAAGACTTTCAAGCATAACAGGACAAGGCCATGAAGAATTTATGACTGAGGTGGTGGTGATTTCGAAGCTTCAACATCGCAATCTTGTGAGACTTCTTGGTTGCTGTGTAGAAGGAGGCGAAAAGATGTTAATTTATGAATACATGCCAAATAAAAGTTTGGCAGCATATCTCTTCGATCCACTCAAACAAGATGTCCTTGATTGGCAAAAGCGTTATCATATAATTGAAGGAACTGCTCGAGGTTTGCTCTATCTTCACAGAGATTCAAGACTAAGAATTATACATAGAGATCTCAAGGCAAGCAACGTCTTATTAGATCAAGAGCTGAATCCTAAGATATCAGATTTTGGTACAGCAAGGATTTTTGGAGTTAGCAAAGATGAAGGCCATACAAGAAGAATAGTTGGAACATACGGCTATATGCCTCCAGAATATGCAATAGAAGGAATTTTTTCGGAGAAATCAGATGTCTTTAGTTTTGGAGTTTTGCTATTGGAGACAATTAGTGGGAGGAAAAGCACAAGCTTCTACAATGATCAGCAAGCTCTAACTCTCATAGGATTTGCGTGGAAACTATGGAATGAAGAGAACATCATGCCTTTAATAGATCCTAAGATACATAACCCACAGTTTGGAAAGGATATGATGAAATGCATACATATCGGATTATTATGCGTGCAAGAACTTGCAAAAGACCGACCTACCATGGATTCTGTTATCTTAATGCTGCACAGCAAGATTGTCAATTTGCCTTTCCCCAAGCAACCAGCTTTCGTCAATTGGCAGGCTGCATTTGCAAAGAGTTCCCATAATCAACAAAATTCTACCTCCAATTATCATGTCACTATCACAAACATCCAGGACATCTTATAA 2439 0.3936 MCLLFFIFSCGLDTLTASESMKDPDTLTSDSTNFTLGFFSPENSSNRYLGIWYVLKTTVVWVANRNEPLTDSPGILKISENGNLVMLDGEEHVVWSSDGSDNDTSHVILQLQDSGNLVVQNNITGIVIWQSFHHLSNTILQRTNGGFNAQTGQKFMLTSWKSPSDPSVGSFTAYMGQSTVPQLFVWNNSHPYWRGGPWNGQIFTGIPNLNNQYLNGLTFQKENGTFYLHFVYINLSPSSFYMLNFEGILVFNSWDDNKKEWVPQWTVQQSDCDLYGICGSFGSCDPHRKPICSCLRGFVPRNTEEWNKGNWTSGCVRRKPLKCDRVKNETRNGYNYDDDDDDDDGFAQLENTKVPDLVNWTLIASASPDCRIQCLNNCSCLAYAYDAGIGCMMWSENLIDIQRFSSGGLELYIRLANSELKVKSKSKLAVTISIPLTIGTILIAAFAYIMWRRSAKHQETEEPLTIVDDEISSEMLKELPLFEFEKLAVATNNFHSANKIGQGGFGPVYKGKLQDGQEVAVKRLSSITGQGHEEFMTEVVVISKLQHRNLVRLLGCCVEGGEKMLIYEYMPNKSLAAYLFDPLKQDVLDWQKRYHIIEGTARGLLYLHRDSRLRIIHRDLKASNVLLDQELNPKISDFGTARIFGVSKDEGHTRRIVGTYGYMPPEYAIEGIFSEKSDVFSFGVLLLETISGRKSTSFYNDQQALTLIGFAWKLWNEENIMPLIDPKIHNPQFGKDMMKCIHIGLLCVQELAKDRPTMDSVILMLHSKIVNLPFPKQPAFVNWQAAFAKSSHNQQNSTSNYHVTITNIQDIL 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2394 812 Gene3D Phosphorylase Kinase; domain 1 455 569 - -
Prci11g2394 812 Pfam D-mannose binding lectin 58 161 IPR001480 -
Prci11g2394 812 SMART ntp_6 341 415 IPR003609 -
Prci11g2394 812 Pfam S-locus glycoprotein domain 193 301 IPR000858 GO:0048544
Prci11g2394 812 SMART serkin_6 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2394 812 Pfam PAN-like domain 342 401 IPR003609 -
Prci11g2394 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 773 - -
Prci11g2394 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 756 - -
Prci11g2394 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Prci11g2394 812 Gene3D - 9 133 IPR036426 -
Prci11g2394 812 ProSiteProfiles Protein kinase domain profile. 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2394 812 Pfam Protein tyrosine and serine/threonine kinase 497 762 IPR001245 GO:0004672|GO:0006468
Prci11g2394 812 ProSiteProfiles PAN/Apple domain profile. 323 416 IPR003609 -
Prci11g2394 812 CDD B_lectin 18 134 IPR001480 -
Prci11g2394 812 PIRSF SRK 1 810 IPR024171 GO:0004674
Prci11g2394 812 SMART blect_4 18 135 IPR001480 -
Prci11g2394 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 49 200 IPR036426 -
Prci11g2394 812 FunFam receptor-like serine/threonine-protein kinase SD1-8 468 569 - -
Prci11g2394 812 ProSiteProfiles Bulb-type lectin domain profile. 12 132 IPR001480 -
Prci11g2394 812 Gene3D Transferase(Phosphotransferase) domain 1 570 772 - -
Prci11g2394 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 8 132 - -
Prci11g2394 812 SUPERFAMILY Protein kinase-like (PK-like) 471 766 IPR011009 -
Prci11g2394 812 CDD PAN_AP_plant 345 416 - -
Prci11g2394 812 CDD STKc_IRAK 500 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2394 Prci-Chr11 26509566 26514286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2394 421 781 Receptor kinase-like Gene Family AT4G05200 51.247 6.82e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2394 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2394 - - qsa:O6P43_012540 940.643