Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2393 ATGTGCTTACTATTTTTCATCTTTAGCTGTGGCTTAGATACTCTTACGGCATCTGAGAGCATGAAAGATCCTGATACCCTTACCTCTGATAGCACCAATTTCACACTTGGATTTTTCAGCCCTGAGAATTCATCCAATCGTTACCTAGGAATTTGGTACGTGTTAAAAACCACTGTGGTATGGGTGGCTAACAGAAACGAACCTCTCACAGATTCTCCTGGGATTCTGAAGATATCTGAGAATGGCAATCTTGTCATGCTAGATGGAGAGGAACATGTTGTTTGGTCATCAGATGGATCAGACAATGACACGTCCCATGTCATCTTGCAGCTTCAGGATTCTGGAAATCTTGTGGTGCAGAACAACATCACAGGAATAGTGATCTGGCAAAGCTTCCACCATCTTTCTAATACAATACTGCAACGCACTAATGGTGGTTTTAATGCACAAACAGGTCAGAAATTCATGTTGACATCATGGAAGAGCCCTTCTGATCCATCCGTGGGAAGCTTTACAGCTTATATGGGACAGAGTACAGTTCCTCAACTGTTCGTTTGGAACAACAGTCACCCGTATTGGCGTGGAGGTCCGTGGAATGGTCAAATCTTCACTGGCATACCGAATTTGAATAATCAGTATCTCAATGGATTAACTTTTCAGAAAGAAAATGGTACTTTCTATTTACATTTTGTATATATAAACCTGTCACCTTCATCATTCTATATGTTGAACTTTGAAGGGATATTGGTATTTAATAGTTGGGATGACAATAAGAAAGAGTGGGTGCCTCAATGGACAGTACAGCAATCAGACTGTGACCTTTATGGTATTTGTGGATCTTTTGGAAGCTGTGATCCACACAGAAAGCCAATTTGTAGCTGTTTGAGAGGTTTTGTACCAAGAAATACAGAAGAATGGAATAAAGGAAACTGGACTAGTGGGTGTGTAAGGAGGAAACCATTGAAGTGTGACAGGGTCAAAAATGAAACCAGGAATGGATATAATTATGATGATGATGATGATGATGATGATGGGTTTGCGCAATTAGAGAATACCAAAGTTCCAGACCTAGTAAATTGGACTCTCATTGCATCAGCATCACCAGATTGCAGAATCCAGTGCTTGAACAATTGTTCCTGCTTAGCATATGCCTATGATGCTGGCATTGGTTGTATGATGTGGAGTGAAAATCTTATTGACATACAAAGGTTCTCAAGTGGTGGCCTCGAACTATACATTCGACTGGCAAATTCAGAACTAAAAGTAAAGAGTAAGAGCAAATTAGCAGTGACAATTTCAATTCCATTGACAATAGGAACAATTCTTATCGCAGCTTTTGCATATATCATGTGGAGACGTTCTGCTAAACATCAAGAAACAGAAGAACCATTAACAATAGTAGACGATGAAATCTCTAGTGAGATGCTAAAGGAACTACCACTGTTTGAATTTGAAAAGCTCGCAGTCGCAACCAACAACTTTCATTCTGCTAATAAGATTGGACAGGGTGGTTTTGGCCCAGTATACAAAGGAAAATTGCAAGATGGACAAGAAGTTGCAGTTAAAAGACTTTCAAGCATAACAGGACAAGGCCATGAAGAATTTATGACTGAGGTGGTGGTGATTTCGAAGCTTCAACATCGCAATCTTGTGAGACTTCTTGGTTGCTGTGTAGAAGGAGGCGAAAAGATGTTAATTTATGAATACATGCCAAATAAAAGTTTGGCAGCATATCTCTTCGATCCACTCAAACAAGATGTCCTTGATTGGCAAAAGCGTTATCATATAATTGAAGGAACTGCTCGAGGTTTGCTCTATCTTCACAGAGATTCAAGACTAAGAATTATACATAGAGATCTCAAGGCAAGCAACGTCTTATTAGATCAAGAGCTGAATCCTAAGATATCAGATTTTGGTACAGCAAGGATTTTTGGAGTTAGCAAAGATGAAGGCCATACAAGAAGAATAGTTGGAACATACGGCTATATGCCTCCAGAATATGCAATAGAAGGAATTTTTTCGGAGAAATCAGATGTCTTTAGTTTTGGAGTTTTGCTATTGGAGACAATTAGTGGGAGGAAAAGCACAAGCTTCTACAATGATCAGCAAGCTCTAACTCTCATAGGATTTGCGTGGAAACTATGGAATGAAGAGAACATCATGCCTTTAATAGATCCTAAGATACATAACCCACAGTTTGGAAAGGATATGATGAAATGCATACATATCGGATTATTATGCGTGCAAGAACTTGCAAAAGACCGACCTACCATGGATTCTGTTATCTTAATGCTGCACAGCAAGATTGTCAATTTGCCTTTCCCCAAGCAACCAGCTTTCGTCAATTGGCAGGCTGCATTTGCAAAGAGTTCCCATAATCAACAAAATTCTACCTCCAATTATCATGTCACTATCACAAACATCCAGGGCGTGAAATCAACCATTATCAGCAACTTGTGGGGCCCAGAATGA 2472 0.396 MCLLFFIFSCGLDTLTASESMKDPDTLTSDSTNFTLGFFSPENSSNRYLGIWYVLKTTVVWVANRNEPLTDSPGILKISENGNLVMLDGEEHVVWSSDGSDNDTSHVILQLQDSGNLVVQNNITGIVIWQSFHHLSNTILQRTNGGFNAQTGQKFMLTSWKSPSDPSVGSFTAYMGQSTVPQLFVWNNSHPYWRGGPWNGQIFTGIPNLNNQYLNGLTFQKENGTFYLHFVYINLSPSSFYMLNFEGILVFNSWDDNKKEWVPQWTVQQSDCDLYGICGSFGSCDPHRKPICSCLRGFVPRNTEEWNKGNWTSGCVRRKPLKCDRVKNETRNGYNYDDDDDDDDGFAQLENTKVPDLVNWTLIASASPDCRIQCLNNCSCLAYAYDAGIGCMMWSENLIDIQRFSSGGLELYIRLANSELKVKSKSKLAVTISIPLTIGTILIAAFAYIMWRRSAKHQETEEPLTIVDDEISSEMLKELPLFEFEKLAVATNNFHSANKIGQGGFGPVYKGKLQDGQEVAVKRLSSITGQGHEEFMTEVVVISKLQHRNLVRLLGCCVEGGEKMLIYEYMPNKSLAAYLFDPLKQDVLDWQKRYHIIEGTARGLLYLHRDSRLRIIHRDLKASNVLLDQELNPKISDFGTARIFGVSKDEGHTRRIVGTYGYMPPEYAIEGIFSEKSDVFSFGVLLLETISGRKSTSFYNDQQALTLIGFAWKLWNEENIMPLIDPKIHNPQFGKDMMKCIHIGLLCVQELAKDRPTMDSVILMLHSKIVNLPFPKQPAFVNWQAAFAKSSHNQQNSTSNYHVTITNIQGVKSTIISNLWGPE 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2393 823 Pfam S-locus glycoprotein domain 193 301 IPR000858 GO:0048544
Prci11g2393 823 PIRSF SRK 1 812 IPR024171 GO:0004674
Prci11g2393 823 SMART ntp_6 341 415 IPR003609 -
Prci11g2393 823 Gene3D Phosphorylase Kinase; domain 1 455 569 - -
Prci11g2393 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 8 132 - -
Prci11g2393 823 Pfam D-mannose binding lectin 58 161 IPR001480 -
Prci11g2393 823 SMART serkin_6 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2393 823 Pfam Protein tyrosine and serine/threonine kinase 497 762 IPR001245 GO:0004672|GO:0006468
Prci11g2393 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Prci11g2393 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 49 200 IPR036426 -
Prci11g2393 823 ProSiteProfiles Protein kinase domain profile. 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2393 823 Pfam PAN-like domain 342 401 IPR003609 -
Prci11g2393 823 Gene3D - 9 133 IPR036426 -
Prci11g2393 823 ProSiteProfiles PAN/Apple domain profile. 323 416 IPR003609 -
Prci11g2393 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 756 - -
Prci11g2393 823 CDD B_lectin 18 134 IPR001480 -
Prci11g2393 823 SMART blect_4 18 135 IPR001480 -
Prci11g2393 823 FunFam receptor-like serine/threonine-protein kinase SD1-8 468 569 - -
Prci11g2393 823 ProSiteProfiles Bulb-type lectin domain profile. 12 132 IPR001480 -
Prci11g2393 823 Gene3D Transferase(Phosphotransferase) domain 1 570 772 - -
Prci11g2393 823 SUPERFAMILY Protein kinase-like (PK-like) 471 766 IPR011009 -
Prci11g2393 823 CDD PAN_AP_plant 345 416 - -
Prci11g2393 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 773 - -
Prci11g2393 823 CDD STKc_IRAK 500 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2393 Prci-Chr11 26507413 26514286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2393 421 781 Receptor kinase-like Gene Family AT4G05200 51.247 1.32e-124 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2393 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2393 - - qsa:O6P43_012540 942.954