Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2390 ATGAAGAGGCCTTTTGAGGATTATTCCCTACTTGATATAAATGCCATTGACACTTTACTTGATGAGGTTATTGAGCACTATGCATTTCCTTCACTTACTCATGAATCTATACTTGCTACTGCTTGTGTTTCTTGCTCTTACATTGATACTTTTGTGTGCCAAAATTACTTAAATGTTGATGTATACTTGAATGGTACCTCTTCTCATGAACTATTTGATGATGATAAAATGGCTACTATGCTTGAACTTAATGGCCATGAGAAGGGTATTATTTCTTGTGATGTAGGTGTCTTGCTGCTCATTTCATGCTTCTATTTATATTCCGGTTCTTCTATAGATTTTAATGACTCGTTTCAATTAATCAAAGACGCTGATACTGTAAGCTCAGGCAGCTTCAAACTTGGGTTCTTTAGCCCAATAAATTCAACCAATCGCTATGTTGGAATTTGGTATCTAAATGAATCCACAGTAATATGGGTGGCTAACAGAAACAACCCTGTGAGAGATTCTTCTGGGGTTTTCACAATTTCAGAGGATGGCAACCTGGTGGGGTTGAATGATCAAAATCTCACACTTTGGTCATCTAATGTGTCAAACATTCCTCCCGATTCATCAATGGCTCAACTTCTAGACACTGGGAACCTTGTTCTGAGTGATAACACCACAGGAAAAACACTATGGGAGAGTTTTCAGCATCCTTCTGATTCATTTATTCCAAAGATGAAACTTGGTACAAATCCAGGAACAGGCGAAAAACCAACGCTTCTTACTTCTTGGAAATCCCCTTCTGATCCATCCATAGGTAGCTTCTCTGCAAGTCTTGAACATTTGGATGCTCCTGAAGTTGTAATCTACAATGGGTCTAAACCATATTGGCGTTCTGGTCCATGGAATGGCGGGGAATTTCTAGGAGTGAATGCTACATACGATAGGTCTAAAGCATATGCTTCTTCAAATCTTGACGGATTCAGTCTAAACGAAGACAATGGTACATATTGCATTTCTTTTGATCTGGCAAGAACTTCTCATTTCGGAGTCTTTAAGTTGAGCTCAATAGGAGAATGGGTTATAACGGGATGGATCAACGAGAAAGAAGTTAGAAGATGGAGGATTCAACACAATGAATGCGATGTGTATGGTCAATGTGGAGAGTTTGGATACTGTAATCCTGAAAGCACTCCAATTTGTAGCTGTTTATATGGGTTTGAGCCCAAGTATCCAGATGAATGGAATAAGCAAAACTGGAAAAATGGTTGTACAAGAAAAGAACCATTGCAGTGTGACAAGAGGATTAAAAGTGGAAGTGAAGATGGGTTCAAGAAACTAGAGAGCGTGAAACCACCAGATTTTGTAGAGCAATTGCAGGTTCCTGATGAAGAAAATTGCGGAAGGAAATGTTTACAAAATTGCTCTTGTTTGGCTTATGCATATGATTTAGCCATAGCATGCATGTTATGGAATGGTAAATTAATTGATATTCGAACATTCGCTCCTAAAGGTGTTGATCTTTACATTCGTCTAGCAAATTCAGAACTCGATAAAATAGGAGATAAAAGAAGGGACAAGTGGAAAGTGATAGTGATTGCTATTTCTTTAACAATCGGAGTCACTGTTTTTGCGGCATGTTCTTATTTTCTATGGAAAATTGTTGCCAGATCAAAAGGCAAAACGAATCAAAATGGTCTGAGTGAAAGCATGATGATAAGAGACTCGGGACAAGAAAAACTAGAGGAGCTTCCACTGTTTGAATTTGAAAAGCTTGCAATTGCGACAAACAACTTTCACGGATGTAACATGATTGGTCAGGGAGGTTTTGGTCTCGTATACAAGGGAGAATTGCAAGATTCACAGGCCATAGCTATTAAAAGGCTTTCAAGAGGCTCTGGGCAAGGCCTTGAAGAATTTATGAATGAAGTAAAGGTGATATCTAAGCTTCAACATCGCAATCTTGTAAGACTTATTGGTTGTTGTATTGAGCAAGATGAAAAGATGTTGGTCTATGAGTACATGCCTAACAAAAGCTTGGATGCAATGCTCTTTGATTCAAGGAAAGTAGTAGTCTTAGATTGGAGAAAACGCTACAGCATAATTGAAGGAATTACTCGAGGATTACTTTATCTCCATAGAGATTCAAGATTAAAAATAATACATAGAGATCTTAAGGCAAGTAATATCTTATTGGATGAAGAGCTAAATCCAAAAATATCAGACTTTGGCTTGGCAAAGATTTTTAAAGGCAATGAGAATGATCAAGGAAACACTAGAAGGGTTGTTGGGACATACGGCTACATGTCTCCTGAGTATGCAATGCAAGGATTATTTTCAGAGAAATCAGATGTCTTCAGTTTTGGAGTGTTGTTGTTAGAAATTGTTAGTGGGAAGAAAAATACTAGCTTCTATCATCAGGAGATGTCCTTAAGCCTATTGGGATTTGCATGGAAACTATGGAAGGAAGACAATGTTAAATCTCTGATAGACTCGAAAATATATGATCCAAGCTTTCATATGGAGATCTTGAGATGCATACATATTGGACTTCTATGCGTACAAGAACTTGCAAAAGATAGACCAAGTATGGCCATTGTGTATTCAATGCTTAATAGTGAGATTGTGAATCTTCCTTCACCAACACAACCTGCTTTCACAAAGAGGCAATGCACTATGAATTTAGAATCTTCTCAACAAAGTGATCATGTTTACTCCAATAACACTGTCACACTTACTAAAATTTAA 2733 0.3765 MKRPFEDYSLLDINAIDTLLDEVIEHYAFPSLTHESILATACVSCSYIDTFVCQNYLNVDVYLNGTSSHELFDDDKMATMLELNGHEKGIISCDVGVLLLISCFYLYSGSSIDFNDSFQLIKDADTVSSGSFKLGFFSPINSTNRYVGIWYLNESTVIWVANRNNPVRDSSGVFTISEDGNLVGLNDQNLTLWSSNVSNIPPDSSMAQLLDTGNLVLSDNTTGKTLWESFQHPSDSFIPKMKLGTNPGTGEKPTLLTSWKSPSDPSIGSFSASLEHLDAPEVVIYNGSKPYWRSGPWNGGEFLGVNATYDRSKAYASSNLDGFSLNEDNGTYCISFDLARTSHFGVFKLSSIGEWVITGWINEKEVRRWRIQHNECDVYGQCGEFGYCNPESTPICSCLYGFEPKYPDEWNKQNWKNGCTRKEPLQCDKRIKSGSEDGFKKLESVKPPDFVEQLQVPDEENCGRKCLQNCSCLAYAYDLAIACMLWNGKLIDIRTFAPKGVDLYIRLANSELDKIGDKRRDKWKVIVIAISLTIGVTVFAACSYFLWKIVARSKGKTNQNGLSESMMIRDSGQEKLEELPLFEFEKLAIATNNFHGCNMIGQGGFGLVYKGELQDSQAIAIKRLSRGSGQGLEEFMNEVKVISKLQHRNLVRLIGCCIEQDEKMLVYEYMPNKSLDAMLFDSRKVVVLDWRKRYSIIEGITRGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGLAKIFKGNENDQGNTRRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGKKNTSFYHQEMSLSLLGFAWKLWKEDNVKSLIDSKIYDPSFHMEILRCIHIGLLCVQELAKDRPSMAIVYSMLNSEIVNLPSPTQPAFTKRQCTMNLESSQQSDHVYSNNTVTLTKI 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2390 910 SUPERFAMILY alpha-D-mannose-specific plant lectins 147 299 IPR036426 -
Prci11g2390 910 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 109 230 - -
Prci11g2390 910 Gene3D Phosphorylase Kinase; domain 1 568 669 - -
Prci11g2390 910 FunFam receptor-like serine/threonine-protein kinase SD1-8 567 669 - -
Prci11g2390 910 ProSiteProfiles Bulb-type lectin domain profile. 112 230 IPR001480 -
Prci11g2390 910 ProSiteProfiles Protein kinase domain profile. 594 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2390 910 SMART serkin_6 594 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2390 910 PIRSF SRK 89 910 IPR024171 GO:0004674
Prci11g2390 910 Pfam S-locus glycoprotein domain 292 405 IPR000858 GO:0048544
Prci11g2390 910 Gene3D Transferase(Phosphotransferase) domain 1 670 875 - -
Prci11g2390 910 SUPERFAMILY Protein kinase-like (PK-like) 578 902 IPR011009 -
Prci11g2390 910 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Prci11g2390 910 CDD B_lectin 127 233 IPR001480 -
Prci11g2390 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Prci11g2390 910 ProSiteProfiles PAN/Apple domain profile. 427 508 IPR003609 -
Prci11g2390 910 Pfam PAN-like domain 434 493 IPR003609 -
Prci11g2390 910 Pfam D-mannose binding lectin 156 260 IPR001480 -
Prci11g2390 910 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 98 858 - -
Prci11g2390 910 CDD PAN_AP_plant 424 508 - -
Prci11g2390 910 SMART blect_4 118 233 IPR001480 -
Prci11g2390 910 CDD STKc_IRAK 600 867 - -
Prci11g2390 910 Gene3D - 116 231 IPR036426 -
Prci11g2390 910 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 670 874 - -
Prci11g2390 910 Pfam Protein tyrosine and serine/threonine kinase 598 861 IPR001245 GO:0004672|GO:0006468
Prci11g2390 910 SMART ntp_6 434 507 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2390 Prci-Chr11 26370206 26383394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2390 525 884 Receptor kinase-like Gene Family AT4G05200 52.893 1.95e-119 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2390 PK_Tyr_Ser-Thr 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2390 - - pcin:129286391 1855.11