Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2386 ATGGGTATCAGAGTTTATAAAGAATTTTTAGGAATTTTCCTCCTGTGTGCTTACTATTTTTCGTCTTTAGCCTCTGGCTTAGATATTCTTACAGCATCTGAGAGCATGAAAGATCCTGATACTCTTATCTCTAATAGCACCAATTTCACACTTGGATTTTTCAGCCCCAAGAATTCATCCAATCGTTACCTAGGAATTTGGTACATGTTAAAAACCAGTGTGGTATGGGTGGCTAACAGAAACGAACCACTCACAGATTCTTCTGGGATTCTCAAGATATCTGAAAATGGCAATCTGGTGATCCAAGATGGAAAGGAACATGTTGTTTGGTCATCAGATGGATCAGATAATGACACGTCCCATGTCACTTTGCAGCTGCAGGATTCTGGAAATCTTGTGCTGCTGAACAACATCACAGGAAAAGTTATATGGCAAAGCTTCGACCATCTTTCTGACACAACACTGCTACACAATAATGATGGTTCTAATGCACAAGAAGGTCAGAAATTCATGTTGACATCATGGAAGAGCCCTTTTGATCCATCCATGGGAAGCTTTGCTGCTTCTATTCAACCTACTATAATTCCTCAACCATTCATTTGGAAAAACAGTCACACATATTGGCGTGGAGGTCCGTGGGACGGTCGAATCTTCATTGGTATACCCAATTTGGACAATCAGTATCTCAATTATGGATTCACTTCACAAAATGTAAATGGTACATTCTATGTATATTTTGTATATATACACCAGTTACCATTATCATTCTATAAGTTGAACTTTGAAGGGAAATTGGTATTTAATAGTTGGGATGACAATAAGAAACAGTGGGTGCCTCAATGGACAGTGCAGCAATCAGACTGTGACATTTATGGCATTTGTGGATCGTTTGGCAGTTGTGATCCACTAAGAAAGCCAATTTGTAGCTGTTTGAGAGGTTTTTTGCCAAGAAATGCAGAAGAATGGAATGAAGGAAACTGGACTAATGGGTGCATAAGGAGGAAACCATTGAAATGTGAGAGAGTAAAAAATGAAACCAGGAATGGATATGATGATGATGAAGATGGGTTTGTGCAATTGGAGAATACCAAGGTTCCAGACCTACTAAATGGGACTTTCACTGTATCAGCATTACCAGATTGCAGAATCCAGTGCTTGAACAACTGTTCCTGCTTAGCATACGCCTATGATGCTGGCATTGGCTGTATGATGTGGAGTGAAAATCTGATTGACATACAAAGGTTCTCAAATGATGGTCTCAACCTGTACATTCGTCTGGCAAATTCGGAACTAGAAGAAAAGAGTAACTTAGCAGTTATAATTTCAATTCCAGTGACAATAGGAACAATTCTTGTCGCAGCTTGTGCGTATGTCATATGGAGATGTTCCGCTAAACATCAAGAAGAACCATTGACAATCATAGACAATGAAATCTCTAGTGAGATGCTAAAGGAACTACCACTGTTTGAATTTGCAAAGCTCGCAGTCTCAACCAACAACTTTCATTCTGCTAATAAGATTGGACAGGGAGGTTTTGGCCCAGTATACAAAGGAAAATTGCAAGATGGACAAGAAATTGCAGTTAAAAGACTTTCAAGTGTAACAGGACAAGGCCATGAAGAATTTATGACTGAGGTAGTGGTGATTTCTAAGCTTCAGCATCGCAATCTTGTGAGACTTCTTGGTTGCTGTGTAGAGGGAGGTGAAAAGATGTTAATTTACGAATACATGCCAAATAAAAGTTTGGAAGCATATCTCTTTGGTCCACTCAAACAAGATGTCCTTGATTGGCAAAAGCGTTATCATATAATAGAAGGAACTGCTCGAGGTTTGCTCTATCTTCATAGAGATTCAAGACTAAGAATTATACATAGAGATCTCAAGGCAAGTAATGTCTTATTGGATCAAGAGCTAAATCCTAAAATATCAGATTTTGGTACAGCAAGGATTTTTGGAGTTAGCAAAGATGAAGGCTATACAAGAAGAGTAGTTGGAACATACGGCTATATGCCTCCAGAATATGCAATAACAGGCATTTTCTCTGAGAAATCAGATGTCTTTAGTTTTGGAGTTTTGCTATTGGAGACAATTAGTGGGAGGAAAAACACAAGCTTCTACAATGATCAGCAAGCTCTAAGTCTAATAGGATTTGCATGGAAACTATGGAATGAAGAGAATATCATGCCTTTAATAGATCCTAAGATACATAACCCACAGTTTGAAGAGGATATGATGAAATGCATACATATCGGATTATTGTGCGTGCAAGAATTTGCAAAAGACCGACCTACCATGGATTCTGTCATCTTAATGCTGCACAGCAAGATTGTCAATTTGCCTTTCCCCAAGCAACCAGCCTTCATCAATTGGCAGGCTGCATTTGCAGAGAGTTCCCAAAATCAACAAAAATCTAGCTCCAATTATCATGTCACTATCACAAACATCCAGGGTAGGTAG 2457 0.3887 MGIRVYKEFLGIFLLCAYYFSSLASGLDILTASESMKDPDTLISNSTNFTLGFFSPKNSSNRYLGIWYMLKTSVVWVANRNEPLTDSSGILKISENGNLVIQDGKEHVVWSSDGSDNDTSHVTLQLQDSGNLVLLNNITGKVIWQSFDHLSDTTLLHNNDGSNAQEGQKFMLTSWKSPFDPSMGSFAASIQPTIIPQPFIWKNSHTYWRGGPWDGRIFIGIPNLDNQYLNYGFTSQNVNGTFYVYFVYIHQLPLSFYKLNFEGKLVFNSWDDNKKQWVPQWTVQQSDCDIYGICGSFGSCDPLRKPICSCLRGFLPRNAEEWNEGNWTNGCIRRKPLKCERVKNETRNGYDDDEDGFVQLENTKVPDLLNGTFTVSALPDCRIQCLNNCSCLAYAYDAGIGCMMWSENLIDIQRFSNDGLNLYIRLANSELEEKSNLAVIISIPVTIGTILVAACAYVIWRCSAKHQEEPLTIIDNEISSEMLKELPLFEFAKLAVSTNNFHSANKIGQGGFGPVYKGKLQDGQEIAVKRLSSVTGQGHEEFMTEVVVISKLQHRNLVRLLGCCVEGGEKMLIYEYMPNKSLEAYLFGPLKQDVLDWQKRYHIIEGTARGLLYLHRDSRLRIIHRDLKASNVLLDQELNPKISDFGTARIFGVSKDEGYTRRVVGTYGYMPPEYAITGIFSEKSDVFSFGVLLLETISGRKNTSFYNDQQALSLIGFAWKLWNEENIMPLIDPKIHNPQFEEDMMKCIHIGLLCVQEFAKDRPTMDSVILMLHSKIVNLPFPKQPAFINWQAAFAESSQNQQKSSSNYHVTITNIQGR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2386 818 CDD PAN_AP_plant 349 427 - -
Prci11g2386 818 SMART ntp_6 352 426 IPR003609 -
Prci11g2386 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 215 IPR036426 -
Prci11g2386 818 PIRSF SRK 3 818 IPR024171 GO:0004674
Prci11g2386 818 SMART serkin_6 501 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2386 818 Gene3D Transferase(Phosphotransferase) domain 1 577 779 - -
Prci11g2386 818 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Prci11g2386 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Prci11g2386 818 CDD B_lectin 33 149 IPR001480 -
Prci11g2386 818 Pfam D-mannose binding lectin 74 176 IPR001480 -
Prci11g2386 818 FunFam receptor-like serine/threonine-protein kinase SD1-8 475 576 - -
Prci11g2386 818 SUPERFAMILY Protein kinase-like (PK-like) 483 800 IPR011009 -
Prci11g2386 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 147 - -
Prci11g2386 818 SMART blect_4 33 150 IPR001480 -
Prci11g2386 818 ProSiteProfiles PAN/Apple domain profile. 339 427 IPR003609 -
Prci11g2386 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 763 - -
Prci11g2386 818 CDD STKc_IRAK 507 772 - -
Prci11g2386 818 Gene3D Phosphorylase Kinase; domain 1 463 576 - -
Prci11g2386 818 Pfam Protein tyrosine and serine/threonine kinase 504 769 IPR001245 GO:0004672|GO:0006468
Prci11g2386 818 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Prci11g2386 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Prci11g2386 818 Pfam PAN-like domain 352 412 IPR003609 -
Prci11g2386 818 ProSiteProfiles Protein kinase domain profile. 501 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2386 818 Gene3D - 23 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2386 Prci-Chr11 26312442 26316347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2386 429 788 Receptor kinase-like Gene Family AT4G05200 50.685 4.38e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2386 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2386 - - qsa:O6P43_012540 936.406