Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2383 ATGTTAAGAATCATGTGTAAAGATATTGTACGTGCCTTGCTGATCATTTCTTGTTTCTGTTTATATTCCGGTTCTTCTATGGATTTTAATGACTCGTTTCAATTAATCAAAGATGCTGATACTGTAAGCTCAGGCACCTTCAAGCTTGGGTTCTTTAGCCCAGAAAATTCAACCAATCGCTATGTTGGAATTTGGTATCTAGATGAATCCACAGCCATATGGGTGGCTAACAGAAACAACCCTCTTAGAGATTCTTTTGGAATTTTCACAATTTCTGAGGATGGCAACCTTGTGGTGTTGAATGATCAAAATCTCACACTTTGGTCATCTAATGTGCCAAATATTCCTCCCAATTCATCAATGGCTCAACTTCTAGACACTGGGAACCTTGTTCTGAATGATAGCACCACAGGAAAAGCACTATGGGAGAGTTTTCAGCATCCTTCTGATTCATTTATTCCAAAAATGAAACTTGTTAGAAACCCAGGAACAGGCGAAAAACCAACGGTTCTTACATCTTGGAAATCCCCTTCTGATCCATCCACAGGTAGCTTCTCTGCTAGTCTTGAACGATTGGATGCTCCTGAAGTTGTAGTCTACAATGGATCTAAACCATATTGGCGTTCTGGTCCATGGAATGGCAGGGAATTTCTAGGAGTACCTTTTTCTTCAAATATTGATAGATTCAGTCTAAAAGCAAACAATGGTACATATTCTATCTCTTTTGATCTGGCAAACCCATCTTATTTTGGAGTCTTTAAGTTGAGTTCAACAGGAAAATGGGTTATAACGGGATGGAGCAACAAGATTGCAGTTGGAAGATGGAGGATTCAACACAACGAATGCGATGTGTATGGTCAATGTGGAGAATTTGGATACTGTAATCCTCAAAGCGCTCCAATTTGTAGCTGTTTAGATGGGTTTGAGCCCAAGAATGCAGATGAATGGAATAAGCAAAACTGGAAAAATGGTTGTATAAGAAAAGAACCATTGCAGTGCGACAAAAGGATAAAAAATGGAAGTGAAGATCGGTTCAATAAACTAGAGAAAGTGAAAACGCCAGATTTTGTACAGCGATTGCAGGTTCCTGATGAAGAAAATTGCAGAAAGCAATGTTTACAAAATTGCTCTTGTTTGGCATATGCCTATGATTTAGCCATAAGATGCATGTCTTGGAGTGGTAAATTAATTGATATTCGAACATTCGCTCCAGGAGGTTTTGATCTTTACATTCGTCCAGCAAATTCAGAACTCGAAAAACCAGCAGAAAATGTTACAGATAAAATGGGAGATAAAAGAAGGAGCAACTGGAAGGTGATAGTGATTGCTATTTCTTTGATAATGGGAGCAACTATTTTGGCTGCATGTTCTTATTTTTTATGGAAAATCGTTGCCAGATTAAAAGGCAAAACGAATCAAAATGGTCTGAGTGAAGGCATGATAGGAGACTCAAAACAAGAAAAACTAGAAGAGCTTCCATTGTTTGAATTTGAAAAGCTTGCAATTGCGACAAACAATTTTCACAATTCTAATAGGCTTGGTCAGGGAGGTTTTGGTCCTGTATACAAGGGAGAATTGCAAGATTCACAAGTTATAGCCGTTAAAAGACTTTCAAGAGGCTCTGGACAGGGCCTTGAAGAATTTATGAATGAAGTAAGGGTGATATCTAAGCTTCAGCATCGCAATCTTGTAAGACTTCTTGGTTGTTGTATCGAAGGAGATGAAAAGATGTTGGTCTATGAGTACATGCCAAACAAAAGTTTGGATGCAGTGCTTTTTGGCAGGAAAATATGGACTGAAGACAATATTAAATCTCTGATAGACCCAGAAATATATGATTCAAGCTTTCATATGGAGATCTTGAGATGCATACAAGTTGGACTTCTATGTGTACAAGAACTTGCAAAAGATAGACCAAGTATGGCCTTTGTATATTCAATGCTTAATAGTGAGATCGTGAATCTTCCTTCACCAACACAACCTGCTTTCACAAAGAGGCAATACACTATGAGTGAAGAATCTTCTCAACAAAAAGATCCTATTTACTCCAATAACACTCACGCTCACTGA 2070 0.3812 MLRIMCKDIVRALLIISCFCLYSGSSMDFNDSFQLIKDADTVSSGTFKLGFFSPENSTNRYVGIWYLDESTAIWVANRNNPLRDSFGIFTISEDGNLVVLNDQNLTLWSSNVPNIPPNSSMAQLLDTGNLVLNDSTTGKALWESFQHPSDSFIPKMKLVRNPGTGEKPTVLTSWKSPSDPSTGSFSASLERLDAPEVVVYNGSKPYWRSGPWNGREFLGVPFSSNIDRFSLKANNGTYSISFDLANPSYFGVFKLSSTGKWVITGWSNKIAVGRWRIQHNECDVYGQCGEFGYCNPQSAPICSCLDGFEPKNADEWNKQNWKNGCIRKEPLQCDKRIKNGSEDRFNKLEKVKTPDFVQRLQVPDEENCRKQCLQNCSCLAYAYDLAIRCMSWSGKLIDIRTFAPGGFDLYIRPANSELEKPAENVTDKMGDKRRSNWKVIVIAISLIMGATILAACSYFLWKIVARLKGKTNQNGLSEGMIGDSKQEKLEELPLFEFEKLAIATNNFHNSNRLGQGGFGPVYKGELQDSQVIAVKRLSRGSGQGLEEFMNEVRVISKLQHRNLVRLLGCCIEGDEKMLVYEYMPNKSLDAVLFGRKIWTEDNIKSLIDPEIYDSSFHMEILRCIQVGLLCVQELAKDRPSMAFVYSMLNSEIVNLPSPTQPAFTKRQYTMSEESSQQKDPIYSNNTHAH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2383 689 ProSiteProfiles Protein kinase domain profile. 507 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2383 689 SUPERFAMILY Protein kinase-like (PK-like) 490 602 IPR011009 -
Prci11g2383 689 SMART blect_4 31 148 IPR001480 -
Prci11g2383 689 Pfam Protein tyrosine and serine/threonine kinase 509 595 IPR001245 GO:0004672|GO:0006468
Prci11g2383 689 MobiDBLite consensus disorder prediction 165 186 - -
Prci11g2383 689 Pfam S-locus glycoprotein domain 207 312 IPR000858 GO:0048544
Prci11g2383 689 CDD PAN_AP_plant 330 412 - -
Prci11g2383 689 Gene3D Phosphorylase Kinase; domain 1 481 582 - -
Prci11g2383 689 CDD B_lectin 43 148 IPR001480 -
Prci11g2383 689 ProSiteProfiles Bulb-type lectin domain profile. 27 145 IPR001480 -
Prci11g2383 689 ProSiteProfiles EGF-like domain profile. 278 314 IPR000742 -
Prci11g2383 689 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 145 - -
Prci11g2383 689 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 640 - -
Prci11g2383 689 MobiDBLite consensus disorder prediction 664 689 - -
Prci11g2383 689 ProSiteProfiles PAN/Apple domain profile. 333 414 IPR003609 -
Prci11g2383 689 Gene3D - 30 146 IPR036426 -
Prci11g2383 689 Pfam PAN-like domain 340 399 IPR003609 -
Prci11g2383 689 Pfam D-mannose binding lectin 71 175 IPR001480 -
Prci11g2383 689 MobiDBLite consensus disorder prediction 166 186 - -
Prci11g2383 689 FunFam receptor-like serine/threonine-protein kinase SD1-8 481 582 - -
Prci11g2383 689 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 180 IPR036426 -
Prci11g2383 689 SMART ntp_6 340 413 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2383 Prci-Chr11 26231633 26235216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2383 589 666 Receptor kinase-like Gene Family AT4G05200 38.462 5.43e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2383 PK_Tyr_Ser-Thr 6.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2383 - - pcin:129285107 1210.28