Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2382 ATGATTTTTACACACACAACTATAGTTCTTCTTTTCCCACTCTTCTTCATTCTCTGTTTCCCTCCTTTGTCCTCACAGGCAGCGAGTTCCATCACACCAGGCAACTTGATTAGAGACGGACCAGACCCTGACACTTTACTCTCAGACGGACTCAATTTCGAACTTGGATTCTTCAGTAAAGGTAACAACAGCTCCTTGAGATACGTTGGAATTTGGTACTACAGAATTCCCAAACCAGAAATCGTATGGGTTGCGAACAGGGACAAGCCCATCAATGGCAGAGTAGGGGTTATCAAAATTGGAAATGATGGCAATTTAGTAATCTTCGATGGGGATAAGAATCAAGTGTGGTCGAGCGATGTATCGAACCCCAATAATCACACAGAAGCTGTTCTTCGAGATGATGGAAACCTTGTTCTTTCCTCCACGGATGATGCAAAAGAAATATGGAAAAGCTTTGATCATCCAACTGACACGTTTCTTCCTAATATGACTATACCAGTGAATCCTTCAAAGGGTGAGATTCGATCTTTTGTGTCATGGAAATCAAGCACAGATCCTGCTCGAGGAAATTTCTCAATGGGAATTGACCCACGAGCATCGACCCAGATAGTGATTTGGGAAGGAGATAAAAGGAGGTGGAGAAGTGGGTATTGGGACGGAAGAATATTCACAGGAGTTTCCAACATGACAGGAAATTATCTCTATGGATTCAAACTCAACACTGATGCAAATGGAGGAAGGCATTTAACTTATACCCCACTGAACATCGCTGACAAGGTGAGGTTTCAGATAGGTTGGGATGGGCTTGAGAGACAGTTTAAGTGGAACGAGGGCGAGAAAAATTGGATCAAAACACAGGAAGAGCCATATAACAAATGTGAGATTTATAACAAGTGTGGGAGTTTTGCAGAATGCAGCTTGCTTTCTCCAATGACATGTGCTTGCATAAGAGGGTTCGAGCCGAAGGAAGTGGATCAGTGGACTAGAAGTAATTGGTCTGGTGGGTGTAAGAGGATGACACCATTGATGGCTGAGAGGAACAATAACAGCAATAATGCAACAGAAGTGGATGTCGAAGAAGATGGTTTCTTGCAGCTGCAATGCAGGAAGTTGCCGGATTCCGCGAGCTTGGTCAATCCTCAGAACAAGGGAGATTGTGAGAGTTATTGCTTGCAGGATACAAATTGTACTGCATATGCTTATGTTAATGGAATTGGATGCCTGATTTGGCATGGAGAGCTACTTGATATTAAGCACTTCGAAAATGGAGGAGGAAATACACTCTATATTCGCCTTGCTCATTCTGATTTAGGTGATGGGAAGAAAAAGATGAAGATAGTGGTAGTATTTGTTATTGTATTGGGGTTAATCTGCCTTGGAATCTCTCTCTGGCTGGTGTGGAGGTTCAAGGGAAGAAAAGCTGTTGCTGCAGCTTCATGCTGTAAGATGAGTGATATTCCGGTTTTTGATACTACAAGAAGCAGGAGTAGACAAGTTTCAGCAGAATTTTCAGGATCAGCTGAACTGAGTTTGGAAGGTCATGAACTAAGTGGACCAGAATTGCCATTGTTCAATTTTGATTGTATTGCAATAGCCACAGACAATTTCTCAGAGGAAAACAGGCTTGGGCAAGGAGGTTTTGGTCCAGTCTACAAGGGAAAGCTTCGTGGGGAGGAGCAAATTGCTGTCAAGAGGCTTTCAAGAAAATCTGGGCAAGGTCTAGAGGAGTTCAAGAATGAGATGATGCTAATTGCCAAACTACAACACAGAAACCTTGTTAGACTATTAGGATGCTCCATTCAAGGAGATGAGAAGTTGTTGGTATATGAATATATGCCAAACAAAAGCTTGGATTGCTTTTTATTTGGTTTGTTTCTCTCTACTTTGCCCAGTCTTTTATATTTTTTCTGCATTTTTAGAATTATTGGACCATTTCATGATATATGGATTGTACTTTTAAGTTATTTTATACTTTCTGGTGTAGATCCTGTCAAACAACTACAATTAGACTGGAAAAAACGCTTTGAAATCATTGAAGGGATTGCAAGAGGGTTGCTTTATTTGCATCGAGATTCAAGGCTTCGAATCATTCACCGAGATTTAAAAGCAAGCAACATTCTTTTGGATGAAGATATGATCCCAAAAATTTCAGACTTTGGGCTAGCAAGGATATTTGGAGGAGGTCAAAGTGAGGCAAATACCACTAGAGTGGTTGGCACATATGGCTATATGTCCCCTGAGTATGCAATGGAAGGTCTATTCTCAGTTAAATCTGATGTCTATAGTTTTGGCGTGTTATTACTTGAGATTATAAGCGGTCGCAAGAACACTAGCTTTCGTCATTCAGATGACTCAAGTCTCATAGGATATGCATGGCATCTCTGGAACGAACAAAGAGCGATGGAGCTTGTCGATCCTTCGATTCAAGATTCATGTACAAAGAACAAGGTTTTGAGATGCATACACATAGGGATGTTGTGTGTGCAGGATTCAGCAGCTCATAGACCAACCATGTCTTCTGTGGTGTTGATGCTTGAGAGTGAAACAACCAATCTTCCTTTGCCAAGACAACCTTTGCTTACTTCCATGAGAAGAAGATCAGAAGACACTGATTTTTACGTGGAAGGTCTTGATGTTTCCTTGAATGAACTTACGGTTACAATGGTGGTTGGAAGATAG 2682 0.4135 MIFTHTTIVLLFPLFFILCFPPLSSQAASSITPGNLIRDGPDPDTLLSDGLNFELGFFSKGNNSSLRYVGIWYYRIPKPEIVWVANRDKPINGRVGVIKIGNDGNLVIFDGDKNQVWSSDVSNPNNHTEAVLRDDGNLVLSSTDDAKEIWKSFDHPTDTFLPNMTIPVNPSKGEIRSFVSWKSSTDPARGNFSMGIDPRASTQIVIWEGDKRRWRSGYWDGRIFTGVSNMTGNYLYGFKLNTDANGGRHLTYTPLNIADKVRFQIGWDGLERQFKWNEGEKNWIKTQEEPYNKCEIYNKCGSFAECSLLSPMTCACIRGFEPKEVDQWTRSNWSGGCKRMTPLMAERNNNSNNATEVDVEEDGFLQLQCRKLPDSASLVNPQNKGDCESYCLQDTNCTAYAYVNGIGCLIWHGELLDIKHFENGGGNTLYIRLAHSDLGDGKKKMKIVVVFVIVLGLICLGISLWLVWRFKGRKAVAAASCCKMSDIPVFDTTRSRSRQVSAEFSGSAELSLEGHELSGPELPLFNFDCIAIATDNFSEENRLGQGGFGPVYKGKLRGEEQIAVKRLSRKSGQGLEEFKNEMMLIAKLQHRNLVRLLGCSIQGDEKLLVYEYMPNKSLDCFLFGLFLSTLPSLLYFFCIFRIIGPFHDIWIVLLSYFILSGVDPVKQLQLDWKKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMIPKISDFGLARIFGGGQSEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIISGRKNTSFRHSDDSSLIGYAWHLWNEQRAMELVDPSIQDSCTKNKVLRCIHIGMLCVQDSAAHRPTMSSVVLMLESETTNLPLPRQPLLTSMRRRSEDTDFYVEGLDVSLNELTVTMVVGR 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2382 893 Gene3D - 23 153 IPR036426 -
Prci11g2382 893 Gene3D Transferase(Phosphotransferase) domain 1 660 854 - -
Prci11g2382 893 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 653 854 - -
Prci11g2382 893 Pfam PAN-like domain 360 418 IPR003609 -
Prci11g2382 893 CDD PAN_AP_plant 358 434 - -
Prci11g2382 893 Pfam Protein tyrosine and serine/threonine kinase 540 844 IPR001245 GO:0004672|GO:0006468
Prci11g2382 893 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Prci11g2382 893 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 153 - -
Prci11g2382 893 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Prci11g2382 893 CDD B_lectin 45 156 IPR001480 -
Prci11g2382 893 ProSiteProfiles Protein kinase domain profile. 537 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2382 893 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 837 - -
Prci11g2382 893 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 187 IPR036426 -
Prci11g2382 893 PIRSF SRK 656 893 IPR024171 GO:0004674
Prci11g2382 893 PIRSF SRK 1 630 IPR024171 GO:0004674
Prci11g2382 893 Gene3D Phosphorylase Kinase; domain 1 513 612 - -
Prci11g2382 893 ProSiteProfiles PAN/Apple domain profile. 359 434 IPR003609 -
Prci11g2382 893 SUPERFAMILY Protein kinase-like (PK-like) 522 871 IPR011009 -
Prci11g2382 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Prci11g2382 893 Pfam D-mannose binding lectin 81 182 IPR001480 -
Prci11g2382 893 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 502 612 - -
Prci11g2382 893 SMART serkin_6 537 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2382 893 SMART ntp_6 359 433 IPR003609 -
Prci11g2382 893 SMART blect_4 34 156 IPR001480 -
Prci11g2382 893 CDD STKc_IRAK 543 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2382 Prci-Chr11 26120925 26124852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2382 507 859 Receptor kinase-like Gene Family AT4G23140 53.611 1.09e-125 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2382 PK_Tyr_Ser-Thr 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2382 - - pcin:129285104 1798.48