Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2378 ATGAAGATAGCAAATGGGATAGTTCTTCTCTGTCTTATATTATTCTCTTACCACTACTTGTTTTGTGCAGCTTCTGATGCCATAACCATAGGTAAACCCATTAGAGATGGAGAACTTGTCATTTCTAAAGGAAGAAAGTTTGCTCTTGGGTTCTTCGCTCCTGGCAAATCGAGCTCTCGCTATGTTGGAATATGGTACTATAACTTGCCAAAGCAAACTGTTGTTTGGGTGGCAAACAGAGACAATCCCATCAATGACACCTCTGGAGTTCTCTCGCTCAGCACAGATGGGAATCTTATACTCCACCACAATAACACCAACTTCCCCATCTGGTCCACAAATGTTTCTGTCACTGTTCCTATTACCAGAATTATAGCTCAACTCTCTGATTTAGGTAATCTTGCTCTAATTCAAAACGACTCCAAAGCGGTGTTCTGGCAAAGCTTTGATCATCCCACCGACACCTTTCTTCCATATGGAAAACTGGGTTTCAACAAAAGAACTGGTCAAGACTGGTTCTTGCAGTCATGGAAGACCGATGATGATCCTGCAACAGGAAGCTTCTCAGCTAGGTTCAATACTTCTGGCAAACCTCAGTTGTTTCTGTACGAGCAAAATGTTCCAGTGTGGCGAATTGGATCCTTCAATGGAGAAATTCTTGTGGGTCTGACGGCTTTGAAACGATTAATGGTGCGTACTTTGAATGTCTCTTTTATGGAAGATGATAGTGAGGTTAGAGTCGTGTATCATGCCTTGGACAACACCTCCATATTGAAGTTTATAGCTAGTCCATCTGGATTCATGCAAACGCATAAATGGGATTATGCGAAGAAAGATTGGATGCGATATCGATCTTATCCAGAAGTGGGCTGTGACGCATACGGAACTTGTGGCCCCAATAGCAACTGTGACTCTTATAACTATGGATACAACAAGTGTTCTTGCCTACCTGGGTTTGAACCTAGAAACCCAACCGATTGGCATGAGAAGAATGATCAATCAGCAGGTTGTGTGAGGAAGAAAGGACAACCCTTGTGCAGAAATGGAGAAGGCTTTGTTAAAGTAGAAAGTGTCAAGATTCCTGATACATCTATAGCAAAAGTTAGAAAGGGTTTGAGCATGGAGGAATGTGAACAAGAGTGCTTGAGAAACTGTTCTTGCAGTGCCTACGCTGCTGCTGATGTGAGAAATGGAGGAAGTGGGTGCTTAGCATGGCATGGGACTCTGATGGACACAATGGTGTTAAATGAGGAAGGCCATGATTTATATGTTCGTGTTGATGCCATTGAACTAGCAAACTATAATAGGAAATCGAAAGGAACACTTTCTATGTCTGGAATGGTGGGAATTCTGATAGCTACTCTGGTTGTAATTATTCTTCTGGTTTCCCCGTGTGTTTATTGCTTTTGGATGAAGAAAAAGAGAGATCAAATGGCTGAGCAACAAATAAACATTGAATCTTCCTCTGAAGAAGAGCATGGTGAAAATAGAACCCAAGCAAGCTTACCATTTTTCAACATCAAAACAATACTGGCTTGTACAAATAGTTTTTCAATTGAGAATGAGTTAGGGCGTGGTGGATTTGGCTCTGTCTACAAGGGCATATTAGTTAATGGACAAGAAGTAGCAGTGAAAAGATTGTCTAAAGGTTCAGGACAAGGGACCGAGTTCAAGAATGAAATTAAACTTATTGCTAAATTGCAGCACAGGAATCTTATAAGGTTGCTCGGATATTGCATTCATAAAGAAGAAAGGATGTTGATCTATGAGTACGTTCCCAACAAAAGCTTGGACTTTTATCTTTTTGATATGAATCAAAGATTATCTTTAGATTGGGATAAGCGTGTTCATATTATTTTTGGAATTGCTCGAGGTCTTCTTTATCTTCATCATGATTCAAGATTGAAAATAATCCACAGAGACCTTAAACCTAGCAATGTTCTCTTAGATGCTGCAATGAACCCCAAAATTTCAGATTTTGGTATGGCTAGAATATTTGCAGAGGAGCAAATCCAAGCAAGAACAAGTAGAATTGTTGGGACATACGGTTATATGTTCCCAGAATATGCAATGGAAGGACAATATTCGACAAAGTCTGATGTCTTCAGCTTTGGTATTCTTTTACTAGAGATTATTAGTGGTAGGAGAAACACAGATCGTGAGAAGGAAGGATCATCCTTGAATTTGATTGGACAATTATGGGACTTGTGGGGAGAGGGAAAGGCCTTGGAAATAGTAGACTCAACACTTGGCGAATCATATCCTGTTGATGTTGCCCTAAGATATATCAAAATAGGGCTCTTATGTGTGCAAGAAAGTGTCATCCATAGGCCATCCACGTCAGAAGTTATTATCATGCTTGGCAATGAAGTAAGCCTTCCCTCGCCTCAAAAGCCTGCATTTCTGTTAAATTCTAATAATTTGTTTTCAGAGGCTTCAACATCTAGAGAAGTTTCAGCTAATGTCCTCACTCATTCTACAATTAGTGGTCGATAA 2496 0.4018 MKIANGIVLLCLILFSYHYLFCAASDAITIGKPIRDGELVISKGRKFALGFFAPGKSSSRYVGIWYYNLPKQTVVWVANRDNPINDTSGVLSLSTDGNLILHHNNTNFPIWSTNVSVTVPITRIIAQLSDLGNLALIQNDSKAVFWQSFDHPTDTFLPYGKLGFNKRTGQDWFLQSWKTDDDPATGSFSARFNTSGKPQLFLYEQNVPVWRIGSFNGEILVGLTALKRLMVRTLNVSFMEDDSEVRVVYHALDNTSILKFIASPSGFMQTHKWDYAKKDWMRYRSYPEVGCDAYGTCGPNSNCDSYNYGYNKCSCLPGFEPRNPTDWHEKNDQSAGCVRKKGQPLCRNGEGFVKVESVKIPDTSIAKVRKGLSMEECEQECLRNCSCSAYAAADVRNGGSGCLAWHGTLMDTMVLNEEGHDLYVRVDAIELANYNRKSKGTLSMSGMVGILIATLVVIILLVSPCVYCFWMKKKRDQMAEQQINIESSSEEEHGENRTQASLPFFNIKTILACTNSFSIENELGRGGFGSVYKGILVNGQEVAVKRLSKGSGQGTXEFKNEIKLIAKLQHRNLIRLLGYCIHKEERMLIYEYVPNKSLDFYLFDMNQRLSLDWDKRVHIIFGIARGLLYLHHDSRLKIIHRDLKPSNVLLDAAMNPKISDFGMARIFAEEQIQARTSRIVGTYGYMFPEYAMEGQYSTKSDVFSFGILLLEIISGRRNTDREKEGSSLNLIGQLWDLWGEGKALEIVDSTLGESYPVDVALRYIKIGLLCVQESVIHRPSTSEVIIMLGNEVSLPSPQKPAFLLNSNNLFSEASTSREVSANVLTHSTISGR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2378 832 Coils Coil 471 491 - -
Prci11g2378 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 481 592 - -
Prci11g2378 832 ProSiteProfiles Protein kinase domain profile. 517 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2378 832 PIRSF SRK 1 832 IPR024171 GO:0004674
Prci11g2378 832 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Prci11g2378 832 CDD B_lectin 33 152 IPR001480 -
Prci11g2378 832 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Prci11g2378 832 Gene3D Phosphorylase Kinase; domain 1 476 592 - -
Prci11g2378 832 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Prci11g2378 832 SMART ntp_6 347 426 IPR003609 -
Prci11g2378 832 Pfam PAN-like domain 346 412 IPR003609 -
Prci11g2378 832 CDD PAN_AP_plant 347 426 - -
Prci11g2378 832 Gene3D - 20 149 IPR036426 -
Prci11g2378 832 SMART serkin_6 517 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2378 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Prci11g2378 832 SUPERFAMILY Protein kinase-like (PK-like) 501 811 IPR011009 -
Prci11g2378 832 Pfam D-mannose binding lectin 73 178 IPR001480 -
Prci11g2378 832 Gene3D Hepatocyte Growth Factor 345 424 - -
Prci11g2378 832 Pfam Protein kinase domain 518 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2378 832 SMART blect_4 31 152 IPR001480 -
Prci11g2378 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Prci11g2378 832 Pfam S-locus glycoprotein domain 210 322 IPR000858 GO:0048544
Prci11g2378 832 Gene3D Transferase(Phosphotransferase) domain 1 593 795 - -
Prci11g2378 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 780 - -
Prci11g2378 832 CDD STKc_IRAK 523 788 - -
Prci11g2378 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Prci11g2378 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2378 Prci-Chr11 26037031 26042581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2378 435 818 Receptor kinase-like Gene Family AT4G23190 52.051 1.79e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2378 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2378 - - pcin:129286378 1177.54