Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2366 ATGATGTTGATTCAACTTCCACGGCTTCTTCTCATGTGGATATTTCTACTCCTACAACTAAGTATGATGTATTCCTTAGTTTTAGAGGGGAAGACACTCGTAACAATTTTGCGCTATCTATACAAAGAACTTCACTATGTAGGCATTCACGCTTTTATGGATCACAAACTTCGAAAAGGAGAACAGATCGCACCGATTCTTTTGAAAATAATAGAGGAATCAAAAATTTCTGTGATTATTTTCTCTAAGGATTATGCTTCTTCAACATGGTGTATGGATGAGCTTGTTCACATCTTAGAATGCAAGGATAAACATGGAAGGATTGTCATCCCTATTTTCTACAATGTAGATCCATCAAATATTCGCAAACAAAATGGGAGTTTTGGATATGGATTTGCTAAACTTAAGCGGAGGTTTAAACACAATCAAGAAAAATTGCAAAAATGGAGAGATGCTTTGGACCAATCGGCAAGTCTCTCTGGATGGGATTCCAATAGTACCAATAGTATCAGACCGGAATCCAAACTTGTTGAAGAGATTGTCAAAGACATTTTGAGCAAGTTAAACTATGAGCCATCGCCTCATCTTGAAGGACTTGTTGGCATTGCTCGTGATATTGAAAATATTGAGAAACTTCTAGATGAGGCCCCCATTGTTGGAATTTGGGGTATGGGCGGTGCTGGTAAGACCACAATTGCTAAAGCTATATTTGAAAAGCTGAAAGTTCAATTTGATGCTTTCTCCTTTATTGAAAATGTGAAAGAGCAATTAGCAAGAATTAGAATGGATGAGTTGCAGAAAAATTGCCTTGTAGAATTATTAAAAGATGAGGACATTAACATCTATGACATAAAATCCCCTTTTGTGAGAAACAGGCTTAAACACAAAAAAATCCTTCTCATACTTGATGATGTGGACAATTCAATAATTGCTGAAGATTTAACTAGAGTGTCTAATTGGCTTGGAGAAGGAAGTAGAATTATCATCACTTCAAGAGACATGCAAGTGCTTAAAAATGCTTCAGCAAAAGCATATCATATTCCGAGTTTGGATTTCAATGATGCCTTTCATCTCTTCAGTTTGAGAGCATTCAAGCAAAATGAGCCATCTAGAGGTTATATGAAATTATCAAAGTCAGTAGTGAGTTATTGTCAAGGAAATCCATTAGCCTTGGTAGTATTGGGTTGCTTTCTTCACGGTAGAGGAAAAGAAGAGTGGGCAAGTGCTTTGGATAAACTGAATCAAGATCCACCCAAGCACATTGTCGATGTTCTCAAAGTGACTTTTGATGGATTGGATGACAAACAACAGAACGTGTTTCTTGAGATATCATTTTTAGTTATGGAAGGAGTTAAGATTTCTTTGAACACAATAAGGCAAATACATGGCTCTTCTGCAGATATTGATACAAGTGTTCTTAGAGAGAGATCCCTCATTTCATTTGATCACGATGGCTATATTAACATGCATGATCTTGTGAGGGAAATGGGCCTTCAAATTGCAAGACAACAGTTATTTTCTGATCCTAAACGCCCTGTTCGACTATGGAGGCCTGAGGACATTGATGATTTTTTCATGAGTAACAGGGGGGAGGAGGCAATTCGATGCCTATCGGTGGACATGAGCAAGATAAAAAGGAAGACATTGAAGTCTATTAAATTGCAAAACATGGATAACTTAATATACCTTAATATTTACAAGTCCGATTGGAGGAAGACTTTAGAGATCATGAATATTGGCCAAGATGTGGATTATCTTTCGAAGGAACTAAGGTTTCTTAGTTGGAAACATTGTCCTCTATCATATGTGCCATTAAACTTGTGTGCGGAGAATCTTGTTGAATTTCAAATGCTTGAAAGTGATATCCAACAGCTTTGGAATGGAGATGTGCATTTTCCAAATTTAAAGGGGATCCAAATAAGTGGCTCGAGATATCTCACGGCACTCCCTGATCTAGCTCAAGCCCCAAATATTGAATGGTTAAGTGGTGATGGCTGTGAATGTTTGGATCAAATCCATTCTTCAACCGTCTTGCCCAAGCTTACTAATTTAGTACTATCTATTAGGGGGGGAAAGCAGATAAAGATGGGTGACACTATGAAAGGTAGAAATTCAGGGTTGGTGTGTGTTGGCAATTATTTGAACCTTCGCGAGTTGTCATTCAATAAAGTAATGATGAAGGTGTTGGCATGTGAAGAGGGTAGGATTATCTGTGGTGTTGAATACAAGCACGTGGTAATGCCATTGGAGAACAGGGAAATGGAAGAGCTAAAAATGGGGGCACAAAGGTTGGCATGTTTACTTCCATTTGTTAGGAAAGTTGAGTGGTCAAAGGGTCCAATTGAGTTTGGGGGCTTCAACCATCATTATACCTCTGACTTCTGTTTCAACCACAAGTGGTCTTTTGATTTTTCAGTTGATGTGAGGGTGAGGAGACATGAAGGAGATAAAAGCATGAGAAGACAAGTGGTTAATCATAATCATAATCATAATGATAAGGAAGTTGAACAAGAGGATGAGTTGATGCTGCAAACAAATAACATTGAAATGCCACTAATCAGACTTCTCAGTGGCATTACTCGTTGGTCACTACTGACACACTTGGAATTAAAGGAGAGTGAAGTTATTGGCAATGCAGGAGGTAGCAACATTCCGCAAGTTTCAATTTTGAGATCACTTTCACTCTCTCAGTTTCACAAAAGGACTCCACCTCTCTTGGATCTATCTCTCTCTCTTTGCATTCCATCATTCACTTACCCTAATCGTTCTTTCACCTTCTGCTATTCCACATGCCCGATTGGAGTTCATTATTATAAATATTTCTTCTGTTTATTAACTTACGGGGTTGATTATTTTCATTTTAGTCATTCTGGCTATAATTGA 2883 0.3791 MMLIQLPRLLLMWIFLLLQLSMMYSLVLEGKTLVTILRYLYKELHYVGIHAFMDHKLRKGEQIAPILLKIIEESKISVIIFSKDYASSTWCMDELVHILECKDKHGRIVIPIFYNVDPSNIRKQNGSFGYGFAKLKRRFKHNQEKLQKWRDALDQSASLSGWDSNSTNSIRPESKLVEEIVKDILSKLNYEPSPHLEGLVGIARDIENIEKLLDEAPIVGIWGMGGAGKTTIAKAIFEKLKVQFDAFSFIENVKEQLARIRMDELQKNCLVELLKDEDINIYDIKSPFVRNRLKHKKILLILDDVDNSIIAEDLTRVSNWLGEGSRIIITSRDMQVLKNASAKAYHIPSLDFNDAFHLFSLRAFKQNEPSRGYMKLSKSVVSYCQGNPLALVVLGCFLHGRGKEEWASALDKLNQDPPKHIVDVLKVTFDGLDDKQQNVFLEISFLVMEGVKISLNTIRQIHGSSADIDTSVLRERSLISFDHDGYINMHDLVREMGLQIARQQLFSDPKRPVRLWRPEDIDDFFMSNRGEEAIRCLSVDMSKIKRKTLKSIKLQNMDNLIYLNIYKSDWRKTLEIMNIGQDVDYLSKELRFLSWKHCPLSYVPLNLCAENLVEFQMLESDIQQLWNGDVHFPNLKGIQISGSRYLTALPDLAQAPNIEWLSGDGCECLDQIHSSTVLPKLTNLVLSIRGGKQIKMGDTMKGRNSGLVCVGNYLNLRELSFNKVMMKVLACEEGRIICGVEYKHVVMPLENREMEELKMGAQRLACLLPFVRKVEWSKGPIEFGGFNHHYTSDFCFNHKWSFDFSVDVRVRRHEGDKSMRRQVVNHNHNHNDKEVEQEDELMLQTNNIEMPLIRLLSGITRWSLLTHLELKESEVIGNAGGSNIPQVSILRSLSLSQFHKRTPPLLDLSLSLCIPSFTYPNRSFTFCYSTCPIGVHYYKYFFCLLTYGVDYFHFSHSGYN 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2366 960 PRINTS Disease resistance protein signature 218 233 - -
Prci11g2366 960 PRINTS Disease resistance protein signature 292 306 - -
Prci11g2366 960 PRINTS Disease resistance protein signature 384 398 - -
Prci11g2366 960 PRINTS Disease resistance protein signature 630 646 - -
Prci11g2366 960 Gene3D - 185 349 IPR027417 -
Prci11g2366 960 SUPERFAMILY L domain-like 534 905 - -
Prci11g2366 960 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 721 IPR044974 GO:0006952
Prci11g2366 960 FunFam Disease resistance protein (TIR-NBS-LRR class) 28 190 - -
Prci11g2366 960 Pfam NB-ARC domain 210 417 IPR002182 GO:0043531
Prci11g2366 960 Gene3D - 350 433 IPR042197 -
Prci11g2366 960 SUPERFAMILY Toll/Interleukin receptor TIR domain 36 162 IPR035897 -
Prci11g2366 960 Gene3D Ribonuclease Inhibitor 531 728 IPR032675 -
Prci11g2366 960 SUPERFAMILY "Winged helix" DNA-binding domain 420 521 IPR036390 -
Prci11g2366 960 SMART till_3 30 159 IPR000157 GO:0007165
Prci11g2366 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 441 IPR027417 -
Prci11g2366 960 ProSiteProfiles TIR domain profile. 16 188 IPR000157 GO:0007165
Prci11g2366 960 Pfam TIR domain 35 200 IPR000157 GO:0007165
Prci11g2366 960 Gene3D - 29 184 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2366 Prci-Chr11 25702613 25708707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2366 87 666 WRKY Transcription Factor Family AT4G12020 29.244 1.71e-62 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2366 - - pcin:129301249 1099.73