Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2365 ATGAGGATACCAGATAGGATGGTTTTTATTTATGTTATATCATTCTATTACAGCTTCTTGTTTTGCTCAGCTTCTGACGCCATAACGATTGACAAGCCCCTAAGTGATGGTGAGCTTCTTGTTTCTAAAGAAAGCAAGTTTGCTCTTGGGTTCTTCACTCCTGGCATATCTAGCTCTCGTTATGTTGGAATCTGGTACCATAACTTGCCAAAGCAAACTGTTGTTTGGGTTGCAAACAGAGATGTTCCAATCAACGACACTTCCGGAATTCTCTCTCTCAGCCCAAATGGAAATCTCGTCCTCCATCACAACTCAACCAAAAGCATGCCCATTTGGTCCACGAATGTTTCTTTCACTGTTCCAAATACAACAGTCATGGCTCAACTCTCTGATACAGGTAACCTTGTTCTGATTCAAAGTGATTCCAAAGTTGTGTTGTGGCAAAGCTTTGATCATCCCACTGACACTTTTCTTCCGTATGCCAAAGTGGGTTTCAACAAGAGAACTGGTCAGAACTTGGTGTTCCACTCATGGAAGGCCGATGACGATCCTGCAACAGGAAGGTACTCAATTAGATTTAATACTTCAGGGAAAGCTCAGTTGTTTCTATACAAAGAAAACGATCCGTTGTGGCGAATAGGATCCTTCAATGGTGAAACATTTGTTGGATTGACGGCAATGAAACCGGAAATGTCGTATATTTTCAACATCTCTGTCATGGACAATGATAATGAGTTTGAAATCACATATAACGCCTTGGTCAACACTTCCATCTTCAAGATCGTAGTTGTTCCATCAGGATACTTGCAAACACATCAATGGGATTACGAAACAAAAGAGTGGAAGCGATACGGGTCATATCCAGCAGTGAACTGTGAAAACTACGGAATTTGTGGACCTAACAGCAACTGTGATTCTTACGACTATGCGTATTACAAGTGTTCATGCTTGCCTGGATTTGAACCCAGAAATCCAACCGATTGGTATAAGAAGAACAATAAATCAGAAGGTTGTGTGCGGAAAAAAGGACCACCCTTGTGTCGGAACGGAGAAGGCTTCGTTAAAGTAGAAAGTGTGAAGATTCCAGATACTTCCATAGCGAATGTTAAGAAGGGTTTGAGCATGGAGGAATGTGAACGAGAGTGCCTGAGAAATTGTTCCTGTAATGCCTATGCTGCTGCAGATGTTAGAAATAAAGGAAGTGGGTGCTTGACATGGCATCACGAGACTTTGATGGACACAATGATGCTCCCTCAAGAAGGCCATGATTTATATGTTCGCGTTGATGCTGTTGAACTAGCAAATTATAACAGGAAATCTAAAGGACCACCTGCTGAGTCTGCAGTGGTTGGAATTATAATAGCTGTTGCTGTTCTGATTGTTCTTCTGATTGCCTTATGCGCGTATTGCTTTTGGATTTGGATGAGAAAAAGAAGAGAGAAATTGGCTGAGAGACAATTAAACTTACAATCTATAACAGAAGAAGAGCATGGTGAAAGTGTAGCCCAATCAAGCTTACCATTTTTCAACATTAAAACCATAATGGCTGCTACAAACAGTTTTTCAAGTGAGAATGCGCTAGGGCATGGTGGATTTGGCTCTGTCTACAAGGGCTCATTAGAAAATGGACGAGAGATTGCAGTGAAAAGATTGTCTAAAGGATCAAGACAAGGGACCCAAGAATTCTTGAATGAAATTAAACTAATTGCTAAGTTGCAGCACAGGAATCTTGTAAAGTTGCTTGGATATTGCATTCATAAAGAAGAAAGGATGTTGATTTATGAATACCTTCCCAACAGGCTGGACTTCTATCTTTTTGATAAGAGATCATCTTTAGAATGGGATAAGCGTGTTCAAATTATTTTTGGAATTGCTCGAGGTCTTCTTTATCTTCATCAGGATTCAAGGTTGAAAATAATCCACAGAGACCTTAAAGCAAGCAATGTTCTTTTAGATACTACAATGAACCCCAAAATTTCAGATTTTGGTTTGGCTAGAATATTCAAAGAGGACCAAGTTCAAGCACAAGCAAGTAGAATTGTTGGGACATATGGTTATATGGCTCCAGAATATGCAATGGAAGGACAATATTCAATAAAGTCAGATGTCTTCAGTTTTGGTATTCTATTATTAGAGATAATTAGTGGGAGGAGAAACACAGATCGTGAAAAGGAAGGATCACCCTTGAATTTGATTGGACGAGTATGGGACCTGTGGATAGAGGGAAAGGCTTTGGAAATAGTGGATTCAACACTTGGAGAATCATATCCTGTTGATATTGTCCAAAGATATATCAAAATAGGGCTCTTGTGTGTGCAGGAAAGTGTCATCAATAGGCCATCCATGTCAGAAGTTATTTTCATGCTTGGTAATGAAGTAAGCCTTCCCTCACCTCAAAAGCCTGCATTCCTATTAAATTCCAGTAGTTTGTATTCGGAGACTACTTCAACGTCTAGAGAAGCTTCAATAAACGTCGTTAGTCATTCTGCTATTAGCGCTCGATAA 2505 0.3992 MRIPDRMVFIYVISFYYSFLFCSASDAITIDKPLSDGELLVSKESKFALGFFTPGISSSRYVGIWYHNLPKQTVVWVANRDVPINDTSGILSLSPNGNLVLHHNSTKSMPIWSTNVSFTVPNTTVMAQLSDTGNLVLIQSDSKVVLWQSFDHPTDTFLPYAKVGFNKRTGQNLVFHSWKADDDPATGRYSIRFNTSGKAQLFLYKENDPLWRIGSFNGETFVGLTAMKPEMSYIFNISVMDNDNEFEITYNALVNTSIFKIVVVPSGYLQTHQWDYETKEWKRYGSYPAVNCENYGICGPNSNCDSYDYAYYKCSCLPGFEPRNPTDWYKKNNKSEGCVRKKGPPLCRNGEGFVKVESVKIPDTSIANVKKGLSMEECERECLRNCSCNAYAAADVRNKGSGCLTWHHETLMDTMMLPQEGHDLYVRVDAVELANYNRKSKGPPAESAVVGIIIAVAVLIVLLIALCAYCFWIWMRKRREKLAERQLNLQSITEEEHGESVAQSSLPFFNIKTIMAATNSFSSENALGHGGFGSVYKGSLENGREIAVKRLSKGSRQGTQEFLNEIKLIAKLQHRNLVKLLGYCIHKEERMLIYEYLPNKXLDFYLFDKRSSLEWDKRVQIIFGIARGLLYLHQDSRLKIIHRDLKASNVLLDTTMNPKISDFGLARIFKEDQVQAQASRIVGTYGYMAPEYAMEGQYSIKSDVFSFGILLLEIISGRRNTDREKEGSPLNLIGRVWDLWIEGKALEIVDSTLGESYPVDIVQRYIKIGLLCVQESVINRPSMSEVIFMLGNEVSLPSPQKPAFLLNSSSLYSETTSTSREASINVVSHSAISAR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2365 835 SMART blect_4 31 153 IPR001480 -
Prci11g2365 835 Gene3D Phosphorylase Kinase; domain 1 482 596 - -
Prci11g2365 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 486 596 - -
Prci11g2365 835 ProSiteProfiles EGF-like domain profile. 288 326 IPR000742 -
Prci11g2365 835 CDD STKc_IRAK 527 790 - -
Prci11g2365 835 Gene3D - 20 151 IPR036426 -
Prci11g2365 835 ProSiteProfiles Protein kinase domain profile. 521 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2365 835 Pfam D-mannose binding lectin 73 179 IPR001480 -
Prci11g2365 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 150 - -
Prci11g2365 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 216 IPR036426 -
Prci11g2365 835 Gene3D Transferase(Phosphotransferase) domain 1 597 797 - -
Prci11g2365 835 Pfam PAN-like domain 347 409 IPR003609 -
Prci11g2365 835 CDD EGF_CA 292 324 - -
Prci11g2365 835 Gene3D Hepatocyte Growth Factor 346 426 - -
Prci11g2365 835 CDD B_lectin 31 153 IPR001480 -
Prci11g2365 835 Pfam Protein tyrosine and serine/threonine kinase 524 787 IPR001245 GO:0004672|GO:0006468
Prci11g2365 835 PIRSF SRK 2 835 IPR024171 GO:0004674
Prci11g2365 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Prci11g2365 835 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 782 - -
Prci11g2365 835 SMART ntp_6 348 428 IPR003609 -
Prci11g2365 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 597 798 - -
Prci11g2365 835 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Prci11g2365 835 CDD PAN_AP_plant 348 428 - -
Prci11g2365 835 ProSiteProfiles PAN/Apple domain profile. 347 429 IPR003609 -
Prci11g2365 835 SUPERFAMILY Protein kinase-like (PK-like) 506 820 IPR011009 -
Prci11g2365 835 SMART serkin_6 521 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2365 835 ProSiteProfiles Bulb-type lectin domain profile. 25 150 IPR001480 -
Prci11g2365 835 Pfam S-locus glycoprotein domain 211 323 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2365 Prci-Chr11 25633699 25640560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2365 437 808 Receptor kinase-like Gene Family AT4G05200 50.933 2.46e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2365 PK_Tyr_Ser-Thr 5.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2365 - - pcin:129286378 1115.14