Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2362 ATGGATCTGATTCAGTACCTTGATCCAGAGCAAAACTGTGCCTTGGTGCGATGGGACAGGCTGATTCGTTTCTCGTTTATGCTGATTTGCTTTCTCTTTAGTTTTGCTGCTTTTTCTTTAGTTTTGTCGTTTCCTTGCTTGTACTGCTACTGTGGTGGCTTTTGCCCTTTTCTATGTCTGAATAGAATTAAAGCAATGAAACATCTCTTGGACTCTGATTCGTCAAAGTCTAACAAGCCAGCATACATGGAAGGAAGCTTCAGCGTCCTTGCTCTTCGACATCCCACCCCACTAGGCCACTACCATTTTCGACGGAACGGAACTGGTCTTCACATCGTCTCCGTCACCGTCACCCGCGAAGGGATCAGAGAGCTGTTCGTTTCTCATCCTTCGCAAATAGCAATAAGGAATTACTGTGTGCTAAGTAACTCTCTCAACTTCTCTCTGTCTTGTTGTTGCCGTGCTCCTGCTCTTCGACTCTCCAATGGCCATACTCTTTCATTCTGTACTTCTGATCTTGACGCCATAACCAAGGACAAACCCATTAGAGATGGTCAGCTTCTGACTTCTAAAGAAGAAAAGTTTGCTCTTGGTTTCTTCACTCCAGGAGTTAACAAAATAACTGGTCAAAGCTGGTTCTTGCAATCATGGAAGAATGAAGAAGATCCTGGAACTGGAAGCTTCTCAGTTAGATTCAGTACCAGGGGAAAATCTCAGGTTTTCTTGTATAAGAATAACTTTCCTTTATGGCGAGCTGGACCCTCCAATGGGGAAATATTAGTTGGGATCCCATCTTTGAAACGAGCCATGCCAAACATTTTGAACGTGTCTGTTCCTGATAATGATGATGAAGTAGGATACATGTACAATGCTATTTCTAAGACCAATATCTTCAGATTAGTAGTTCTTCGATCAGGATTAGCACAACTATTCAAGTGGGATGATAGTTTAAATGAATGGACACGCCAATGGTCTGCACCAGAATTGAATTGTGACTACTATGAATCTTGCGGATCCAACAGTAAGTGTGATCCTCAAAACCAGTCAAACTGGTGTTCATGCTTGCCTGGGTATGAACCGAAAAATCCAACGGATTGGAATCAAAACAATGTTGTAACAGAGGGGTGTGTGAGGAAGAAAGGATCACTATCCATGTGTGGGAATAATGGAGAAGGATTTGTGATGGTAAGAAAGGTCAAGATTCCTGACACATCTATAGCTAATTGTAAAATGGGTTTGAATATGGAGGAATGTGAAGGAGCATGCTTGAGAAACTGTTCTTGCACTGCTTATGCAGCTACAGATATGAGAAATGGATTAGGATGTGGGTGCTTAACATGGCATGGTGCTCTAATGGACACACAGGTATTGAGTGAGGGAGGCCAATATTTATATGTCCGTGTTGATGCTATTGAATTAGCAAAATACGCCAGGAAGGCAAAAGGAATGCTTGCTATGGCTAGGATGGTGGGAATTACAGCAGCTTCTATCACTTTCATTGTTCTTCTTGTTGCCATCATTGTGTATTGGTTTCAGAAGAATAAAAGAGATAAAATGACAGAGCAACAACTAAAGATGGATTCCGGAGAGGAGCAAGCTGTAAATAGTGCACAGCTAGCCTTGTCATTTTTCAGCATCAAAATCATAATGACTGCTACAAATAAATTCTCAAATGAGAATGAGTTAGGTGAAGGTGGGTTTGGTTGTGTATACAAGGGCTTGTTAGTGGATGGACAAGAAATAGCAGTGAAGAGGTTATCTAAAGGTCATGGACAAGGGATTCAAGAATTCAAGAATGGAATTAAACTAATTGCAAAATTACAGCACAGAAACCTTGTGAAGTTGCTTGGATATTGCATTCACAAAGAAGAAAGGATGTTAATTTATGAGCATTTGCCCAACAAAAGCTTGGACTTCTACCTTTTTGATATGAATCATAGATCAAGATTAGATTGGAATACACGAGTTCATATTATTTTCGGAATTGCTCATGGTGTTCTTTATCTTCATCAAGATTCAAGGCTAAAAATAATTCATAGAGACCTTAAAGCTAGCAATATTTTTTTAGATGTTGCAATGCATCCTAAAATTTCAGATTTTAGCATGGCTAAAATATTTGGAGAGGATATAATCCAAGCAAGAACAAGACGAGTTGTTGGGACCTAG 2166 0.4017 MDLIQYLDPEQNCALVRWDRLIRFSFMLICFLFSFAAFSLVLSFPCLYCYCGGFCPFLCLNRIKAMKHLLDSDSSKSNKPAYMEGSFSVLALRHPTPLGHYHFRRNGTGLHIVSVTVTREGIRELFVSHPSQIAIRNYCVLSNSLNFSLSCCCRAPALRLSNGHTLSFCTSDLDAITKDKPIRDGQLLTSKEEKFALGFFTPGVNKITGQSWFLQSWKNEEDPGTGSFSVRFSTRGKSQVFLYKNNFPLWRAGPSNGEILVGIPSLKRAMPNILNVSVPDNDDEVGYMYNAISKTNIFRLVVLRSGLAQLFKWDDSLNEWTRQWSAPELNCDYYESCGSNSKCDPQNQSNFXCSCLPGYEPKNPTDWNQNNVVTEGCVRKKGSLSMCGNNGEGFVMVRKVKIPDTSIANCKMGLNMEECEGACLRNCSCTAYAATDMRNGLGCGCLTWHGALMDTQVLSEGGQYLYVRVDAIELAKYARKAKGMLAMARMVGITAASITFIVLLVAIIVYWFQKNKRDKMTEQQLKMDSGEEQAVNSAQLALSFFSIKIIMTATNKFSNENELGEGGFGCVYKGLLVDGQEIAVKRLSKGHGQGIQEFKNGIKLIAKLQHRNLVKLLGYCIHKEERMLIYEHLPNKSLDFYLFDMNHRSRLDWNTRVHIIFGIAHGVLYLHQDSRLKIIHRDLKASNIFLDVAMHPKISDFSMAKIFGEDIIQARTRRVVGT 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2362 722 FunFam Os07g0541700 protein 633 722 - -
Prci11g2362 722 ProSiteProfiles PAN/Apple domain profile. 387 470 IPR003609 -
Prci11g2362 722 SMART serkin_6 557 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2362 722 Pfam Protein tyrosine and serine/threonine kinase 560 707 IPR001245 GO:0004672|GO:0006468
Prci11g2362 722 SMART ntp_6 389 469 IPR003609 -
Prci11g2362 722 ProSitePatterns Protein kinases ATP-binding region signature. 563 585 IPR017441 GO:0005524
Prci11g2362 722 CDD PAN_AP_plant 387 469 - -
Prci11g2362 722 Gene3D Phosphorylase Kinase; domain 1 516 632 - -
Prci11g2362 722 Gene3D Transferase(Phosphotransferase) domain 1 633 722 - -
Prci11g2362 722 ProSiteProfiles EGF-like domain profile. 327 365 IPR000742 -
Prci11g2362 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Prci11g2362 722 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 203 710 - -
Prci11g2362 722 Pfam PAN-like domain 387 455 IPR003609 -
Prci11g2362 722 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 520 632 - -
Prci11g2362 722 SUPERFAMILY Protein kinase-like (PK-like) 537 722 IPR011009 -
Prci11g2362 722 Pfam S-locus glycoprotein domain 250 363 IPR000858 GO:0048544
Prci11g2362 722 ProSiteProfiles Protein kinase domain profile. 557 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2362 Prci-Chr11 25506934 25517386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2362 469 722 Receptor kinase-like Gene Family AT4G05200 50.787 2.52e-75 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2362 PK_Tyr_Ser-Thr 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2362 - - pcin:129286383 1456.04