Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2360 ATGTTAGCAAAAAAGGTGGTTATTTGGTCTGTCATAATTCGCAAATGCTTCTTGTTTTGTGCAGCTTTGGACACCATAACCATTAACAAACCCCTCAGAGATGGTGATCAGCTTCTGATTTCTAAAGAAAAAAAGTTTGCTCTTGGTTTCTTCACTCCAGGCAAATCCAGCAATCGCTATGTTGGAATTTGGTACTACAATTTGATAGAGCAAACTGTCGTTTGGGTTGCAAACAGAGACGATCCCATGAATAACACCTCAGGAATTCTCTCCATCAGCTCAGACGGAAACCTAATTCTCCATCACAACAACTCCGACATGCCCATCTGGTCTACGAATGTTTCTGTCACTGTTCCAAATGCTAAAGTTATGGCTCAACTCACAGATTTAGGTAATCTTGTTTTGATCCAAAATAATTCCAAAGCTGTTATCTGGCAGAGCTTTGATCATCCCACGGATACCTTACTCCCGTATGCCAAATTGGGTGCGAACAAAAGAACTGGTCAGAGCTGGTTCTTGCGATCTTGGAAGACGGAGGAGGATCCTGGAACAGGAAGCTTCTCAGTTAGGTTCAACACTAGTGGGAAAGCTCAGTTGTTCATGTACTATAAGGACACTCCAGTGTGGCGTGGTGGATCCTTCAATGGTGAAGTATTCGTTGGTATCCCGTTTATTAAACGAGCAAAGGTGAATGCTTCTAACATGACTGTCACGGACAATGATAATGAAATTAGCTACGTATATAACGCCTTTGACAAGACCCTTATTGTAAGGATGGTAGCTCTTCCGGCTGGACTCTTTCAATCTTTGACCTGGGATTCTAATAAGAAACGATGGAGGCGATACTGGTCTGCTCCAGAAGGTGATTGTGATAACTATGGATCCTGTGGCACCAATACCGACTGTGACCCTCTTGACTATGCAAAGTTCAAATGTTCTTGCCTACCTGGGTTTGAACCCAAAAATGCATCACGTTGGTATCAACATGCTGATGCAACAGAGGGTTGTATGAGGAAGAAAGGACCATCCTTATGTGGAAATGGAGAAGGTTTTGTTAGAGTTGAAAGTGTGAAGATTCCTGATACATCTGTAGTTAATGCTAATATGGAGATGGGTTTGGAAGAATGTGAAAAAGAGTGCTTGAGAAACTGTTCTTGTAGTGCCTATGCAACTGCTGATGTGAGAAATGGTGGAAGCGGATGCTTGACATGGTATGGGACTTTGATGGACACACAGATATTAAGTGAGGAAGGGCATGATTTATTTGTTCGCGTTGATGCTGTTGAGCTTGCCAAATATGCTAAGAAACCAAAACGACCACATGTTAAGTTTGGGAAAGTGGGAATAGCAACGACCAGCGTTGGTTTGATTATTTCTCTTCTGACTGCCTTAACCGTGTATTGCATTTGGAAGAGAAAAAGAGGAGATGACATAACCGAACTTGAGTTAAAATTAGATTCCCCAACAGATCAAGAGGACCATGATAATAACAGGGCACAATCAGGCTTACCTTTTTTCAGCATCAAAAACATAACGACTGCAACAAACAATTTCTCCAATGAGAATCAATTAGGGAGAGGTGGATTTGGTTCCGTATACAAGGGCTTATTAACTGGTGGACAAGTGGTAGCAGTGAAGAGACTATCTCATTGTTCTGGACAAGGGACTCGCGAGTTCATGAATGAAATTAAACTAATTGCAAAACTGCAACATAGAAATCTTGTGAAGTTGCTTGGGTATTGCATTCACGAGAAAGAAAGGATGTTGATCTATGAGTACCTTCCCAACAAAAGCTTGGACTTTTTTATCTTTGATAGGATTCAAAGAATGTCATTAGATTGGGATACACGCTTTCATATCATATTTGGAATTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCAAGGTTAAAAATAATCCATCGAGATCTTAAAGCTAGCAATGTCCTATTAGATGCTACAATGAATCCTAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGAGGATCAAACCCAAGCAAAAACAAGACGAATTGCGGGGACATATGGTTATATGTCTCCAGAATATGCAATGGGAGGACAATATTCAACAAAATCTGATGTTTTTAGTTTTGGTATTCTAATGTTAGAGATTATTAGCGGCAAGAGAAATACAGATCATGATGAAGCAAGAGCATTCCTAAATTTGATTGGACATGTATGGGAGCTGTGGAGGGAAGGAAAACCCTTGGAAATAATGGACTCAACGCTTGGTGAATCATATCCTGTTGACGTGGCCTTAAGATGTATACAGATTGGGCTCTTGTGTGTGCAAGAAATTGCCTTCCATAGGCCATCCATGTTGGAAGTTATTTTCATGCTTGGCAATGAAGTAAGCCTTCCATTACCTCAAAAGCCTGCATTCCTATTGAATTATTTTGTACAGCCTTCAGAGTCTTCAACATTTGGAAAACCTTCAATGAACAACATCACTACTACTGCAATTAGTGGTCGATAA 2502 0.4045 MLAKKVVIWSVIIRKCFLFCAALDTITINKPLRDGDQLLISKEKKFALGFFTPGKSSNRYVGIWYYNLIEQTVVWVANRDDPMNNTSGILSISSDGNLILHHNNSDMPIWSTNVSVTVPNAKVMAQLTDLGNLVLIQNNSKAVIWQSFDHPTDTLLPYAKLGANKRTGQSWFLRSWKTEEDPGTGSFSVRFNTSGKAQLFMYYKDTPVWRGGSFNGEVFVGIPFIKRAKVNASNMTVTDNDNEISYVYNAFDKTLIVRMVALPAGLFQSLTWDSNKKRWRRYWSAPEGDCDNYGSCGTNTDCDPLDYAKFKCSCLPGFEPKNASRWYQHADATEGCMRKKGPSLCGNGEGFVRVESVKIPDTSVVNANMEMGLEECEKECLRNCSCSAYATADVRNGGSGCLTWYGTLMDTQILSEEGHDLFVRVDAVELAKYAKKPKRPHVKFGKVGIATTSVGLIISLLTALTVYCIWKRKRGDDITELELKLDSPTDQEDHDNNRAQSGLPFFSIKNITTATNNFSNENQLGRGGFGSVYKGLLTGGQVVAVKRLSHCSGQGTREFMNEIKLIAKLQHRNLVKLLGYCIHEKERMLIYEYLPNKSLDFFIFDRIQRMSLDWDTRFHIIFGIARGLLYLHQDSRLKIIHRDLKASNVLLDATMNPKISDFGMARIFGEDQTQAKTRRIAGTYGYMSPEYAMGGQYSTKSDVFSFGILMLEIISGKRNTDHDEARAFLNLIGHVWELWREGKPLEIMDSTLGESYPVDVALRCIQIGLLCVQEIAFHRPSMLEVIFMLGNEVSLPLPQKPAFLLNYFVQPSESSTFGKPSMNNITTTAISGR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2360 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 483 593 - -
Prci11g2360 833 SUPERFAMILY Protein kinase-like (PK-like) 501 809 IPR011009 -
Prci11g2360 833 Pfam Protein tyrosine and serine/threonine kinase 521 729 IPR001245 GO:0004672|GO:0006468
Prci11g2360 833 Pfam S-locus glycoprotein domain 209 322 IPR000858 GO:0048544
Prci11g2360 833 CDD STKc_IRAK 524 789 - -
Prci11g2360 833 Gene3D Transferase(Phosphotransferase) domain 1 594 794 - -
Prci11g2360 833 CDD B_lectin 35 151 IPR001480 -
Prci11g2360 833 CDD PAN_AP_plant 342 425 - -
Prci11g2360 833 SMART blect_4 29 151 IPR001480 -
Prci11g2360 833 Gene3D - 19 149 IPR036426 -
Prci11g2360 833 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Prci11g2360 833 ProSiteProfiles Protein kinase domain profile. 518 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2360 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 781 - -
Prci11g2360 833 Gene3D Hepatocyte Growth Factor 344 422 - -
Prci11g2360 833 SMART serkin_6 518 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2360 833 SMART ntp_6 346 425 IPR003609 -
Prci11g2360 833 Pfam PAN-like domain 345 411 IPR003609 -
Prci11g2360 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Prci11g2360 833 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Prci11g2360 833 ProSiteProfiles Bulb-type lectin domain profile. 23 148 IPR001480 -
Prci11g2360 833 PIRSF SRK 1 833 IPR024171 GO:0004674
Prci11g2360 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Prci11g2360 833 Pfam D-mannose binding lectin 72 177 IPR001480 -
Prci11g2360 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Prci11g2360 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 796 - -
Prci11g2360 833 Gene3D Phosphorylase Kinase; domain 1 483 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2360 Prci-Chr11 25464149 25469368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2360 449 830 Receptor kinase-like Gene Family AT4G05200 49.870 5.27e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2360 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2360 - - pcin:129286378 1259.97