Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2358 ATGGAGCACAAGCATGTTTTGCTGTCAGCACTGAGTGTTGGGGTTGGTCTTGGAGCTGGCCTTAGGTTGAGTTCAGGGCTTGGAGGGGATCACGAGTCTGGTGATGAGCTTTATGGTGAGCAGATTGAGCAGGAGCTTATGAGGCAGGTGATTGATGGCAAGGAATGTGAGGAAACATTTCAACAGTTTCCTTATTACTTGAGTGAAAGAACTCGAGAGTTATTGATTAGTGCTGCATCTGTTCATTTAAGACAACTTTATTTTTCCAAACACACCCGGAACCTTTCCCCGGCAAGCAGGGCAATTCTGCTTTCTGGACCTGCAGAACTTTACCTGCAAACTCTTGCCAAGGCTTTAGCACATCGCTTTGAATCAAAGTTGCTGCTACTAGATGTTGCTGACTTCTCTCTCAAGATACAGAGCAAATATGGATGTTCAAGAAAAGAATCGTCTCCTAAAAGGTCCTTATCTGAGGTGGCTTCAGAGAGATTGTCTGGTTTGCTTGGTTCCTTAACAGTTCTCCCTTCAAATGGCAAAACTAAAGGCACTTTTCACAAAGGCAGTAATACTACTGGAAGTCCCAAGGTTACTTCAAAGCTTCAGGGGAATACTGCTTCCAAATCATCCCCTGCAAATTCAGCTTCCTTGAAGAACAAAAGCAGCTTGTGTGTCGATGAAAAACTCTTTATGCAGCTGCTTTTTAAGGTCTTGGCTTCTGTGTCAGAAAAGAGTTCCATCATTTTGTACATCAGGGATGCTGACAAAATTTTCCTTCAATCAGAGCAATTGTATAATTTATTTAAAGAAATGCTAGAGGAACTTTCAGGGCCAGTCCTGATACTTGGTTCCAAGATTGCAGAGAAAACCAAAAAACCTGCAGATCTCCCACCATGGCTAGCTCCGCCTCGCAAAGTGGATAAATGTTCAAAAGTTGATGAAAGGCTTGCAGCGTTATTTCCATACATCATTCCGATCAAACCACCAGAAGATGAGAGTGATCTTGAAGATTGGAAAACCCAACTGGAAGAGAACAAGAAAATAATTAAGTCTCAAGATAACAGAAACCACATTGCTGAAGTACTGGCAGCAAATGATGTTGAATGTAAAGACTTGAATTCAATCAGCCATGAGGACACAAAGACATTAAGCAGATATATTGATGAAATTGTGATATCTGCAATATCTTACTACTTGATGAATACGAAGGATCCAGAATATCGGAATGGGAGGCTTGTAATATCATCTGAGAGTTTGTGCCATGGTTTGGATCTATTTCGCAAACAGAAAAGTAGTGCCAGTGGAAAGAAGGAAGAGACTGGTGGAAAGAAGGACGTTCGTCCAGACAATGAAAATGAGAGGAACATAAGATCAGAACTAGTCCCCGCAAATGAGATAGGAGTTACATTCTCGGATATTGGTGCATTAGAGGAGGTTAAGGAATCACTCCAAGAGCTAGTCATGCTTCCTCTTCGAAGACCAGACCTCTTCAAAAGTGGACTTCTTAAGCCTTGCCGAGGTATATTGTTGTTTGGGCCACCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAAGGAAGCGGGAGCAAGTTTCATAAATGTCTCAATGTCTACCATCATGTCAATGTGGTATGGAGAAGCTGAAAAGAATATCCGAGCTCTGTTCTCACTAGCTGCAAAGGTTTCTCCAACTATTATTTTTATTGATGAGGTTGATAGCCTGCTTGGGCGACGGTCAAGATGTGGAGAGCATGAGGCTACAAGGAGGGTTAAGAATGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAAGGGGAGCGAATTCTAGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTGAGCGAAGAATCATGGTTGGTCTTCCATCAGTTGAGGCTAGGGAAATTATCTTGAAAACTCTCCTAGCTAAGGAAAATACTGAAAATTTAGACTTCAAACAGCTTGCACTCCTGACAGAGGGATATACTGGAAGTGATCTCAAGAATGTGTGCATTGCTGCTGCTTATCGACCTGTGAGGGAGCTTATTAAACAGGAGAGATTGAAGGATATGGAAAAGAATGAAAAAGAAGTTGAAGGCCAAAGCTCAGAAGCTGCTTCAAGTACCAAAGAGGATAAAGAAGAGCATGAAAAGAATAAGAAAGAGGCTGGAGAACAAAGTTCAGAAGCTACTTCAAGTACCAAAAAGGATAAGGAAGAGCATGAAAAGAATAAGAAAGAGGCTGAAGAACAAAGCTTAGAAGCTGCTTCAAGTGCTAACGAGGATAAAGTGGATCCAAAAATTACCTTAAGGCCTATAAACATGGAAGACATGATTCAGGCTAAGAACCAGGTTCCTGCAAGTTTTGATGCTGACGGAGCAATAATGCATGAGCTGAAGCAGTGGAACGAGCTGTATGGAGAACGAGGTTTGCGGTTGTAA 2472 0.4195 MEHKHVLLSALSVGVGLGAGLRLSSGLGGDHESGDELYGEQIEQELMRQVIDGKECEETFQQFPYYLSERTRELLISAASVHLRQLYFSKHTRNLSPASRAILLSGPAELYLQTLAKALAHRFESKLLLLDVADFSLKIQSKYGCSRKESSPKRSLSEVASERLSGLLGSLTVLPSNGKTKGTFHKGSNTTGSPKVTSKLQGNTASKSSPANSASLKNKSSLCVDEKLFMQLLFKVLASVSEKSSIILYIRDADKIFLQSEQLYNLFKEMLEELSGPVLILGSKIAEKTKKPADLPPWLAPPRKVDKCSKVDERLAALFPYIIPIKPPEDESDLEDWKTQLEENKKIIKSQDNRNHIAEVLAANDVECKDLNSISHEDTKTLSRYIDEIVISAISYYLMNTKDPEYRNGRLVISSESLCHGLDLFRKQKSSASGKKEETGGKKDVRPDNENERNIRSELVPANEIGVTFSDIGALEEVKESLQELVMLPLRRPDLFKSGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTIMSMWYGEAEKNIRALFSLAAKVSPTIIFIDEVDSLLGRRSRCGEHEATRRVKNEFMTHWDGLLTKQGERILVLAATNRPFDLDDAIIRRFERRIMVGLPSVEAREIILKTLLAKENTENLDFKQLALLTEGYTGSDLKNVCIAAAYRPVRELIKQERLKDMEKNEKEVEGQSSEAASSTKEDKEEHEKNKKEAGEQSSEATSSTKKDKEEHEKNKKEAEEQSLEAASSANEDKVDPKITLRPINMEDMIQAKNQVPASFDADGAIMHELKQWNELYGERGLRL 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2358 823 MobiDBLite consensus disorder prediction 702 778 - -
Prci11g2358 823 Pfam ATPase family associated with various cellular activities (AAA) 507 637 IPR003959 GO:0005524|GO:0016887
Prci11g2358 823 Coils Coil 334 354 - -
Prci11g2358 823 ProSitePatterns AAA-protein family signature. 610 629 IPR003960 GO:0005524|GO:0016887
Prci11g2358 823 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 820 - -
Prci11g2358 823 Gene3D - 639 720 - -
Prci11g2358 823 SMART AAA_5 503 640 IPR003593 GO:0016887
Prci11g2358 823 Coils Coil 716 736 - -
Prci11g2358 823 MobiDBLite consensus disorder prediction 429 455 - -
Prci11g2358 823 MobiDBLite consensus disorder prediction 702 762 - -
Prci11g2358 823 MobiDBLite consensus disorder prediction 178 215 - -
Prci11g2358 823 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 466 641 - -
Prci11g2358 823 Coils Coil 741 768 - -
Prci11g2358 823 Gene3D - 466 724 IPR027417 -
Prci11g2358 823 Pfam AAA+ lid domain 659 703 IPR041569 -
Prci11g2358 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 694 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2358 Prci-Chr11 25426558 25434102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2358 467 698 Calmodulin-binding Proteins AT3G56690 39.831 2.41e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2358 - - pcin:129285842 1531.54