Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2349 ATGGCTCAACTCTCTGATATAGGTAATCTTGTTCTGCAGATTCAGAATGACTCCAAAACTTTGTTGTGGCAAAGCTTTGATCATCCCACTGACACTCTTCTTCCATACGCCAAACTGGGTTTCAACAAAAGAACTGGTGAGAGCTGGTTGTTGCAGTCATGGAAGTCAGAAGATGATCCTGGAACAGGAAGCATCTCACTTAGGTTCAACACATCAGGGAAAGATCAGGTTTTTCTTTACAATAAAAACGTTCCACTGTGGCGAGGTGGGTTCTTCAATGGCGAAATACTTGTGGGGTTGCCATCTATGAGACGAGAAATGTCATATGCTTTCAACCTCACTGTTACAGACAATGACAATGAGGCAGGAATCATGTTTCATGCCGTCGACCACACCGCCATCTTCCGGTTGGGGGTTACTCCGACAGGCTACATGCAAACACATAAATGGGAGTACGATAAGAATGATTGGAAGCTATACGGATCGTATCCAGAAATCAATTGTGAAACCTATGGAACTTGTGGAGCTAACAGTAAGTGTGACTCTTTTAACTATGCATACAACAAGTGCTTTTGCCTACCTGGGTTTGAACCTAAAAACCCAACAAATTGGAATAATAACGATGCTTCAGAGGGTTGTGTGAGGACGAAAGGACCATCCATGTGTGGGAATGGAGAAGGATTCATTAAAGTAGAAAGTGTGAAGATTCCAGATACTTCCATAGCGAATGTTAAGAAGGGTTTGAGCATGGATGAATGTGAACGAGAATGCTTGAGAAACTGTTCTTGTAATGCCTATGCTGCTTCAGATGTCAGAAATGGAGGAAGTGGATGCTTAGCTTGGCATGGGACTTTGATGGACACAATGGTACTGAGTGAGGAAGGACATGATTTATATGTTCGTGTTGATGCTGTTGAATTAGCAAATTATGCCAAGAAATCAAAAGCAAAACTTTCTAAGCTTGGGATGGTGGGAATTCCAGTGGCTACTGTTGTTGTGATTGTTCTTCTGATTGCCTTGTATGCGTATTGCTTTTGGATGAGGAAAACAAGAGGCCTAGGCGGTGAAATAACTGAAGAACAAATGAAAATAGATTCCCCAACAGAAGAGGAGGACCATGGTGAAAATAGAGCACAACCAAGCTTGCCATTTTTCAGTATTAAAACAATAATGATTGCAACACAAAAATTCTCGGATGAGAATCGACTGGGGCAAGGTGGATTTGGATCTGTGTACAAGGGCTTATTAGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCTCAAGGTTCTAGACAAGGGACTCAAGAGTTCAAGAATGAAATCAAAGTAATTGGAAAACTACAACACAGGAATCTTGTAAAGTTGCTTGGTTATTGCATTCATAAAAGAGAAAGAATGTTGATATATGAATACCTACCCAATAAAAGCTTGGACTTCTTTCTCTTTGATAGGAATAGAAGGTCATCATTAGATTGGGATACACGTTTTCATATCATCATTGGAATTGCTCGAGGTATTCTCTACCTTCCAAATTCGAGGCTGAAAATAATTCATAGGGACCTTAAAGCTAGCAATGTCCTTTTAGATGTTGCAATGAATCCCAAAATTTCAGATTTTGGCATGGCTAGAATATTTGAGGAGGATCAAATCCAAGCAAGAACACGAAGAATTGTTGGGACATATGGTTACATGTCTCCAGAATATGCAATGGAAGGACAATATTCAACAAAGTCTGATGTTTTCAGCTTCGGTATTCTATTGTTAGAGATTATCAGCGGCAAAAGAAATACAGACCACGATAAAGGAAGGGAACCCTTAAATTTAATTGGACAAGTATGGGAGATGTGGAGAGAAGAAAAATCCTTGGAAATAGTTGATTCATTACTTGGAGAAGATTATCCAATTGACATAGCATTACGATGTATACATATTGGGCTCTTGTGTGTGCAAGAAAAAGCCTCTTATAGGCCTTCCATGTCAGAAGTAATTTTCATGCTTGGCAATGAAGTTTCCCTTCCCTTGCCTCGAAGGCCTGCATTCCTATTCAATTCTAACACAGAGTTTCCAGAATCTTCAGCATCTGGAGATCCTTCGGTAAACAATGTTACTACTACTACAATCATATGCCTTCATCAATTTATTATCTATGAGACAAGTCACGAGATAATGAAGATAGCAAATGGGACGATAGTTATTTTGTCTGTTACAATCCATCACTGCTTCTTGTTTTGTGCAGCTTTGTTGTCTGACACCATAACAATTGACAAACCCATAAGCGATGGTGAGCTTCTGATTTCTAAAGAAAACATTTTTGCTCTTGGGTTCTTCACTCCAGGCAAATCGAGCTATCGCTATGTTGGAATTTGGTACTATAATTTGCAAGAGCGCACTGTCGTTTGGGTTGCAAACAGAGACGATCCCATGAATGACACCTCAGGAATTCTCTCCATCAGCTCTGATGGAAACCTAATTCTCCATCACAATCACTCCGACAAACCCATCTGGTCAACGAATGTTTCTGTCACTGTTCCAAATACAGTAGCCATGGCTCAACTCACAGATTCAGGTAATTTTGTTTTGACTGACAATCACTCCAAGACTGTTTTATGGCAGAGCTTTGATCATCCCACTGATACGTTGCTTCCATTTGCCAAATTGGGAGTCAACAAAAGAACTGGTCAGAGCTGGTTCTTGCGGTCATGGAAGACAGATGATGATCCTGGATCAGGAAACTTTTCTATCAGGTTTAATACAAGTGGGAAATCTCAGTTATTCCTGTACAACAATGACGCACCTTGGTGGCGAGCAGGTTCCTTCAATGGCGAAATGTTCATAGGAATCCCATTTATGAAACGAGCAATGACCACTTATTTTAACGTTGCTATTACTGATGATGATAATGAGATTGGGGTTGTATTTCACTCCTTTGACAAAAAGGTCATATTGCGTGTGGGGGTTATTCAATCTGGATTCTTTCAAGCTTTCCTATGGGATTTTAATAAGAAACAATGGAATCGATACTATTCTGGGCCAGAAGTGGATTGTGACAACTATGGAACCTGTGGTGCTAACAGCAATTGTGATCCTCTTAACTATGCAAATTTCAAGTGTTCTTGCTTACCTGGGTTTGAACCTAAGAATCCAACGAACTGGTATCAACATACTGATGCAACAGAAGGTTGTGTGAGGAAGAAAGGACCATCGTTGTGTGGGAATAATGGAGAAGGATTTGTTAGAGTTGAAAATGTGAAGATTCCTGATACATCTATAGCGAATGCTAATATGGAGATCACGAGTTTGGAAGAATGTGAAAAAGAGTGCTTGAGAAACTGTTCTTGTAGTGCTTATGCTTCTGCAGATGTGAGAAATGGTGGAAGGGGATGCTTGACGTGGCATGGGACTTTGATCGACACACAGATATTAAGTCATGAAGGGCAAGACATATTTGTTCGGGTTGATTCTATTGAACTTGCAAAATATACCAGGAAATCAAAAGGATCACTTGCTATGTCAGAGAGACTGGGACTTGCAGTGGCTTGTGTCGCATTGATTTCTATTTTGACTGTCTTATCTGTGTGCTGTTTTCGTAACAAAATATCAAGAGATGAAACAATCGAACAAGAATTGAAATTCAATTCCCCAACAGAAGAGCAGAATGGTGAAAACAGAGAGCAAACAAGCTTACCATTTTTCAGCATCAAAAGCATAATGGCTGCAACAAACAATTTCTCAGATGAGAATCAATTAGGGCAAGGTGGATTTGGTTCTGTGTACAAGGGAATATTAGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCCCAAGATTCTGGACAAGGGACTCAAGAGTTCAAGAATGAAATCAAACTAATTGCCAAACTGCAACATAGGAATCTTGTGAAGTTGCTTGGATATTGCATTCATAAAGAAGAAAGGATGTTGATCTATGAGTACCTTCCCAACAAAAGCTTGAACTTATTTCTCTTTGATGGCAATCAAAGAATGTCATTAGATTGGGACATACGTTTCCATATTATATTTGGAATTGCTCGTGGTCTTCTCTATCTCCATCAAGATTCAAGACTAAAAATAATCCATAGAGACCTTAAGCCTAGCAATGTTCTCTTAGATGCAACAATGAATCCCAAAATTTCAGATTTTGGCATGGCTAGAATATTTGGAGAGAACCAAATCCAAGCAAAAACTAGACGAATTGTTGGGACATATGGTTATATGGCTCCAGAATATGCAATGGTAGGACAGTATTCAACAAAATCTGATGTTTTCAGCTTTGGTATTCTATTATTAGAGATTATTAGTGGCAAGAGGAATACAGACTGCGATAAAGAAAAAGAAACCCTAAATTTGATTGGACAGGTATGGGACATGTGGAGAGAAGGAAGGCCCTTGGAAATAGTGGATTCAACACTTGGTGAATCATATCCTCTTGATGTAGCCCTAAGGTGTGTACAAATTGGGCTCTTGTGTGTTCAAGAAAGTGCTTTCTATAGGCCATCCATGTTGGAAGTTGTTTTCATGCTTGGAAATGAAGTAACCATTCCCTCACCTCGAAAGCCTGCATTCTTATTCGATTCTAATAAAGAGCATTCAGAGTATTCAACATCTAGAGAGGCTTCAATAAACACTGTTTCAACTACTACAATCAGTGCTCGATAA 4680 0.3947 MAQLSDIGNLVLQIQNDSKTLLWQSFDHPTDTLLPYAKLGFNKRTGESWLLQSWKSEDDPGTGSISLRFNTSGKDQVFLYNKNVPLWRGGFFNGEILVGLPSMRREMSYAFNLTVTDNDNEAGIMFHAVDHTAIFRLGVTPTGYMQTHKWEYDKNDWKLYGSYPEINCETYGTCGANSKCDSFNYAYNKCFCLPGFEPKNPTNWNNNDASEGCVRTKGPSMCGNGEGFIKVESVKIPDTSIANVKKGLSMDECERECLRNCSCNAYAASDVRNGGSGCLAWHGTLMDTMVLSEEGHDLYVRVDAVELANYAKKSKAKLSKLGMVGIPVATVVVIVLLIALYAYCFWMRKTRGLGGEITEEQMKIDSPTEEEDHGENRAQPSLPFFSIKTIMIATQKFSDENRLGQGGFGSVYKGLLVNGQEIAVKRLSQGSRQGTQEFKNEIKVIGKLQHRNLVKLLGYCIHKRERMLIYEYLPNKSLDFFLFDRNRRSSLDWDTRFHIIIGIARGILYLHXNSRLKIIHRDLKASNVLLDVAMNPKISDFGMARIFEEDQIQARTRRIVGTYGYMSPEYAMEGQYSTKSDVFSFGILLLEIISGKRNTDHDKGREPLNLIGQVWEMWREEKSLEIVDSLLGEDYPIDIALRCIHIGLLCVQEKASYRPSMSEVIFMLGNEVSLPLPRRPAFLFNSNTEFPESSASGDPSVNNVTTTTIICLHQFIIYETSHEIMKIANGTIVILSVTIHHCFLFCAALLSDTITIDKPISDGELLISKENIFALGFFTPGKSSYRYVGIWYYNLQERTVVWVANRDDPMNDTSGILSISSDGNLILHHNHSDKPIWSTNVSVTVPNTVAMAQLTDSGNFVLTDNHSKTVLWQSFDHPTDTLLPFAKLGVNKRTGQSWFLRSWKTDDDPGSGNFSIRFNTSGKSQLFLYNNDAPWWRAGSFNGEMFIGIPFMKRAMTTYFNVAITDDDNEIGVVFHSFDKKVILRVGVIQSGFFQAFLWDFNKKQWNRYYSGPEVDCDNYGTCGANSNCDPLNYANFKCSCLPGFEPKNPTNWYQHTDATEGCVRKKGPSLCGNNGEGFVRVENVKIPDTSIANANMEITSLEECEKECLRNCSCSAYASADVRNGGRGCLTWHGTLIDTQILSHEGQDIFVRVDSIELAKYTRKSKGSLAMSERLGLAVACVALISILTVLSVCCFRNKISRDETIEQELKFNSPTEEQNGENREQTSLPFFSIKSIMAATNNFSDENQLGQGGFGSVYKGILVNGQEIAVKRLSQDSGQGTQEFKNEIKLIAKLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLNLFLFDGNQRMSLDWDIRFHIIFGIARGLLYLHQDSRLKIIHRDLKPSNVLLDATMNPKISDFGMARIFGENQIQAKTRRIVGTYGYMAPEYAMVGQYSTKSDVFSFGILLLEIISGKRNTDCDKEKETLNLIGQVWDMWREGRPLEIVDSTLGESYPLDVALRCVQIGLLCVQESAFYRPSMLEVVFMLGNEVTIPSPRKPAFLFDSNKEHSEYSTSREASINTVSTTTISAR 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2349 1560 CDD STKc_IRAK 403 668 - -
Prci11g2349 1560 ProSiteProfiles Protein kinase domain profile. 1245 1522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2349 1560 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 746 875 - -
Prci11g2349 1560 SMART blect_4 757 878 IPR001480 -
Prci11g2349 1560 SMART ntp_6 1074 1154 IPR003609 -
Prci11g2349 1560 SMART ntp_6 223 302 IPR003609 -
Prci11g2349 1560 ProSiteProfiles Protein kinase domain profile. 397 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2349 1560 Pfam S-locus glycoprotein domain 936 1049 IPR000858 GO:0048544
Prci11g2349 1560 Pfam S-locus glycoprotein domain 87 200 IPR000858 GO:0048544
Prci11g2349 1560 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
Prci11g2349 1560 CDD PAN_AP_plant 1069 1154 - -
Prci11g2349 1560 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1321 1524 - -
Prci11g2349 1560 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 60 IPR036426 -
Prci11g2349 1560 Gene3D - 747 876 IPR036426 -
Prci11g2349 1560 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 360 472 - -
Prci11g2349 1560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Prci11g2349 1560 CDD B_lectin 757 878 IPR001480 -
Prci11g2349 1560 Gene3D Hepatocyte Growth Factor 1070 1152 - -
Prci11g2349 1560 CDD PAN_AP_plant 223 302 - -
Prci11g2349 1560 SUPERFAMILY Protein kinase-like (PK-like) 380 689 IPR011009 -
Prci11g2349 1560 Gene3D Phosphorylase Kinase; domain 1 1206 1320 - -
Prci11g2349 1560 Gene3D Phosphorylase Kinase; domain 1 358 472 - -
Prci11g2349 1560 Pfam PAN-like domain 222 288 IPR003609 -
Prci11g2349 1560 Pfam PAN-like domain 1072 1140 IPR003609 -
Prci11g2349 1560 ProSiteProfiles Bulb-type lectin domain profile. 751 875 IPR001480 -
Prci11g2349 1560 Pfam Protein kinase domain 1246 1455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2349 1560 ProSiteProfiles EGF-like domain profile. 1013 1051 IPR000742 -
Prci11g2349 1560 ProSiteProfiles PAN/Apple domain profile. 222 303 IPR003609 -
Prci11g2349 1560 ProSitePatterns Protein kinases ATP-binding region signature. 1251 1273 IPR017441 GO:0005524
Prci11g2349 1560 SUPERFAMILY alpha-D-mannose-specific plant lectins 800 909 IPR036426 -
Prci11g2349 1560 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1210 1320 - -
Prci11g2349 1560 SMART serkin_6 397 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2349 1560 SMART serkin_6 1245 1505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2349 1560 Gene3D Transferase(Phosphotransferase) domain 1 1321 1523 - -
Prci11g2349 1560 Gene3D Transferase(Phosphotransferase) domain 1 473 673 - -
Prci11g2349 1560 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 741 1508 - -
Prci11g2349 1560 ProSiteProfiles PAN/Apple domain profile. 1072 1155 IPR003609 -
Prci11g2349 1560 FunFam Liguleless narrow1 473 675 - -
Prci11g2349 1560 SUPERFAMILY Protein kinase-like (PK-like) 1228 1537 IPR011009 -
Prci11g2349 1560 Pfam Protein tyrosine and serine/threonine kinase 400 665 IPR001245 GO:0004672|GO:0006468
Prci11g2349 1560 Pfam D-mannose binding lectin 799 904 IPR001480 -
Prci11g2349 1560 Pfam D-mannose binding lectin 1 55 IPR001480 -
Prci11g2349 1560 CDD STKc_IRAK 1251 1516 - -
Prci11g2349 1560 CDD EGF_CA 1016 1049 - -
Prci11g2349 1560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1366 1378 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2349 Prci-Chr11 25139898 25159181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2349 311 709 Receptor kinase-like Gene Family AT4G05200 49.250 1.80e-121 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2349 PK_Tyr_Ser-Thr 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2349 - - pcin:129286378 3151.69