Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2347 ATGGAGGAAACAAAGTTCTTCACCCTCTTCTTTCTTGGCACTTCTTTTTGTTTGATATCCTTGTTTCCAACAGTTTTGAAAGCAAAGGATTCCATAACTTCAACGCATTCCATCACTGATAGCCAGACACTAGTTTCCTCTGGTGAAAAATTTGAACTTGGTTTCTTCAGTCCTGGCAATTCCAGTTTGAAATATCTGGGAATATGGTACAAGTATATCCCAAAGCTTACTGTTGTTTGGGTTGCAAACAGGGACAATCCACTTGTGAATTCTACTGGCACTTTAAAATTCAGCAATGACGGTAAGCTTATCATTCTCAGCCATACAGGAGGTATCATATGGGCTGCGAACTCATCCAGATCAGCAAGGAAACCAGTAGCTCAGCTTCTAGACTCTGGAAATTTCGTCTTCAGAGATCTTGAAGATGAAAGCTCTGAGAGCTACAGATGGGAGAGTTTTGATCATCCAACTGATACATTTATTCCGGGAATGAGACTTGGTTGGAACTTCAAAACTGGGTTGAACAGACATTTAACCTCTTGGAAAAGACATGATGATCCTTCTTCTGGAGAGTATACGTATAGTGTGGATCCACGTGGCCTTCCTCAGCTTCTTCTTCTTAAAGGGAAAGAGAAGGTCTTCAGAAGTGGACCATGGTTTGCACAACAACTCAAAGGTGACCCAGCTCTTATGGAAAACCCAGTTTTCAAACCTGTTTTTATTTTTGATTCTGATGAAGTGATTTTCACGTATGAAGTTAAGGACAGTGTCACTTCAAGATTTGTACTTACTCAATCTGGTATGATTCAGCACTTCTCGTGGAGTGATCCTCATTCCAGTTGGATCCCAGATTTTACAGTTCAAGGAGATCGCTGTGATGATTACGCCATTTGTGGTGCCAATGGTAGTTGTGGCATAAAAGAATCCCCAATTTGCAAGTGTTTGGATGGATTTGAGCCAAGACTACCTCAAGATTGGCGGAAATATGAATGGTCAGGTGGATGTATTAGGAAGGATTCTCAAACTTGCAGAAATGGAGAGGGATTTAAGAAACTTACAGGAGTGAAACTACCAGATTCTTCTGTGTTTCACACAAACTCAACCATGAGTTTTGAGGAGTGTGAGGCAGAGTGCTTGAAGAACTGTTCTTGTGTAGCTTATGCTAAACAAGATATTAATACAACCGGCAAAGGATGTGTTTGTTGGTTTGGCAGCTTATTCGATATCAGAGAGGTTGCAGATTATGGACAAGATCTCTACATCAGAGTTCCAGCTTCAGAACTAGGTTCAAATGCTCATGTCCCGAAAAGAAAGAAACATATAATAATTATTGTGGCTGTATCAGTGGGTTCAGCAATTGTTGTCTTGGTATCATGGCTCATAATTAAGAGATGGAGAAGGGAAGGAGCTATAGAGGCAGAAATTCAACTGGTACTTAACAGATCTAGAAGTGAACTCCCATCATTCAAGATTGACATTATTGAAGCTGCAACAAAGAACTTCTCTGTCTGCAATAAGATCGGAGAAGGTGGATTTGGTCCTGTATACAAAGGTAAACTAGCATCAGGACAAGAAATAGCTGTGAAAAGGCTATCTGAAAGTTCAGGACAAGGCTTGCAAGAGTTCAAGAATGAGGTTATTACAATATCCCAACTTCAACATCGAAATCTTGTCAAACTTCTAGGTTGCTGCATTCATAAAGATGACAGAATGTTGATCTATGAGTACATGCCAAATCAAAGCTTAGACTCCCTGCTATTTGATGAAACAAAACGCTCTACACTCACCTGGCAGCAGAGACTGGACATTATTGTCGGAGTAGCTAGAGGAATCCTTTACCTGCACAGAGACTCAAGACTCAGAATAATTCATAGAGATTTGAAAGCCAGCAATGTTCTTTTAGATAGTGAAATGAATCCAAAAATTTCTGACTTTGGAATGGCAAGAATGTTTGGCAGAGATCAAACTGAAGCAAAAACCAATAGATTAGTTGGAACCTATGGATACATGCCACCAGAGTATGCAATAGATGGCCACTTCTCATTCAAATCTGATGTCTTCAGCTTTGGTGTTTTGCTATTAGAGCTGTTGAGCGGCAAGAAAAATAAAGGATTTTTCCATCCAGATCACAAGCTGAACCTCCTTGGCCATGCATGGAAGCTTTGGACTGAAGAGAATGCATTGGAGCTGATGGATACAATACTTGAGAATCAGTTTCCTGCATCAGAAGCTCTGAGGTGTATCCAAGTGGGACTTTCTTGCGTTCAACAGAACCCAGAAGATCGACCAACAATGTCACAAGTGCTTCTGATGTTAGACAGTGACACTGTCTCGCTGCCCCAACCTGGACGACCAGGAATGTATTCAGAGAGATATTTCTCTGAAACAGATTCATCATCACTTGCAGGAGTCAATTCTTGTTCCAATGACACAAGCATCACCTTACTGGAGGGTCGTTAA 2460 0.4081 MEETKFFTLFFLGTSFCLISLFPTVLKAKDSITSTHSITDSQTLVSSGEKFELGFFSPGNSSLKYLGIWYKYIPKLTVVWVANRDNPLVNSTGTLKFSNDGKLIILSHTGGIIWAANSSRSARKPVAQLLDSGNFVFRDLEDESSESYRWESFDHPTDTFIPGMRLGWNFKTGLNRHLTSWKRHDDPSSGEYTYSVDPRGLPQLLLLKGKEKVFRSGPWFAQQLKGDPALMENPVFKPVFIFDSDEVIFTYEVKDSVTSRFVLTQSGMIQHFSWSDPHSSWIPDFTVQGDRCDDYAICGANGSCGIKESPICKCLDGFEPRLPQDWRKYEWSGGCIRKDSQTCRNGEGFKKLTGVKLPDSSVFHTNSTMSFEECEAECLKNCSCVAYAKQDINTTGKGCVCWFGSLFDIREVADYGQDLYIRVPASELGSNAHVPKRKKHIIIIVAVSVGSAIVVLVSWLIIKRWRREGAIEAEIQLVLNRSRSELPSFKIDIIEAATKNFSVCNKIGEGGFGPVYKGKLASGQEIAVKRLSESSGQGLQEFKNEVITISQLQHRNLVKLLGCCIHKDDRMLIYEYMPNQSLDSLLFDETKRSTLTWQQRLDIIVGVARGILYLHRDSRLRIIHRDLKASNVLLDSEMNPKISDFGMARMFGRDQTEAKTNRLVGTYGYMPPEYAIDGHFSFKSDVFSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWTEENALELMDTILENQFPASEALRCIQVGLSCVQQNPEDRPTMSQVLLMLDSDTVSLPQPGRPGMYSERYFSETDSSSLAGVNSCSNDTSITLLEGR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2347 819 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Prci11g2347 819 SUPERFAMILY Protein kinase-like (PK-like) 484 786 IPR011009 -
Prci11g2347 819 Gene3D Transferase(Phosphotransferase) domain 1 577 779 - -
Prci11g2347 819 SMART ntp_6 344 423 IPR003609 -
Prci11g2347 819 Pfam D-mannose binding lectin 77 182 IPR001480 -
Prci11g2347 819 Gene3D Hepatocyte Growth Factor 340 419 - -
Prci11g2347 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Prci11g2347 819 CDD STKc_IRAK 507 773 - -
Prci11g2347 819 Gene3D - 24 153 IPR036426 -
Prci11g2347 819 CDD PAN_AP_plant 344 424 - -
Prci11g2347 819 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Prci11g2347 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Prci11g2347 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Prci11g2347 819 SMART serkin_6 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2347 819 Pfam S-locus glycoprotein domain 214 321 IPR000858 GO:0048544
Prci11g2347 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 763 - -
Prci11g2347 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 153 - -
Prci11g2347 819 Pfam Protein tyrosine and serine/threonine kinase 503 769 IPR001245 GO:0004672|GO:0006468
Prci11g2347 819 ProSiteProfiles Protein kinase domain profile. 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2347 819 PIRSF SRK 2 819 IPR024171 GO:0004674
Prci11g2347 819 Gene3D Phosphorylase Kinase; domain 1 476 576 - -
Prci11g2347 819 CDD B_lectin 35 156 IPR001480 -
Prci11g2347 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 576 - -
Prci11g2347 819 Pfam PAN-like domain 343 409 IPR003609 -
Prci11g2347 819 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Prci11g2347 819 SMART blect_4 35 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2347 Prci-Chr11 25084434 25088053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2347 423 786 Receptor kinase-like Gene Family AT4G05200 51.902 7.29e-128 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2347 PK_Tyr_Ser-Thr 2.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2347 - - gmx:100804024 1228.39