Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2345 ATGCTAACAAGCTTGGACAAGGAGGTTTTGGTTCGGTTTATAAGTAATGGAATGGCAATAGCAGTGAAGAGGCTATCAAAGTACTCTGGACAAGGCATTGAGGAATTCAAAAATGAGGTTGTTTTAATTGCGAAGCTCCAACATAGGAATCTTGTGAGAATCTTGGGTTGTTGCATACAAGGAGAAGAGAAGATGTTGATCTATGAGTATTTGCCAAATAAAAGTTTGGACTTTTTCATATATGATCAAGTAAGGAAGTTACAACTAAACTGGAGCAAACGGTTTCATATCATATGCGGGGTTGCGAGGGGAATCTTATATCTCCATCAAGATTCAAGGTTAAGAATCATTCATAGAGACTTGAAGGCCAGTAATGTCTTATTAGACTCTTCATTAAATCCAAAAATTGCAGATTTTGGTATGGCCAGAATATTTGGAGGAGATCAAATTGAAGCAAACACAAAACGTGTTGTTGGAACCTATGGTTATATGTCACCAGAATATGCAATGGAAGGATTATTCTCAGTAAAATCTGACGTGTATAGTTTTGGAGTTTTGCTTCTAGAGATTGTTACTGGCAAAAAGAATAGTGGTCATTATGAAGAAATCACCTCAACTTTGGTCGGACATATTTGGGAACTATGGAGAGAAGGTAGAGCCATGGAGATTGTTGATTCATCACTAATAGACGAGGCATGCCTTGATGAGCTTCTAAAATGCATCCAAATTGGGCTTCTCTGTGTACAAGATTATGCAACAGACAGACCAACTATGTCTTCAGTTGTTTCCATGTTGGGAAGTGACTCAACTCTTCCTTCTCCTAAACAACCAGCATTTATTTTCAAAAGATCAAATACCTGTGACAATTCAAATCCATCAACCAGTGAAGGAGTTAATTCTGTAAATGAGATGAGTACTACTGTGATCGAAGCTCGCTAA 939 0.377 MLTSLDKEVLVRFISNGMAIAVKRLSKYSGQGIEEFKNEVVLIAKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDFFIYDQVRKLQLNWSKRFHIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSSLNPKIADFGMARIFGGDQIEANTKRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVTGKKNSGHYEEITSTLVGHIWELWREGRAMEIVDSSLIDEACLDELLKCIQIGLLCVQDYATDRPTMSSVVSMLGSDSTLPSPKQPAFIFKRSNTCDNSNPSTSEGVNSVNEMSTTVIEAR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2345 312 Pfam Domain of unknown function (DUF3403) 268 312 IPR021820 GO:0004674
Prci11g2345 312 ProSiteProfiles Protein kinase domain profile. 1 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2345 312 SUPERFAMILY Protein kinase-like (PK-like) 10 293 IPR011009 -
Prci11g2345 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Prci11g2345 312 Gene3D Phosphorylase Kinase; domain 1 5 70 - -
Prci11g2345 312 Pfam Protein tyrosine and serine/threonine kinase 16 265 IPR001245 GO:0004672|GO:0006468
Prci11g2345 312 PIRSF ILK 7 271 - -
Prci11g2345 312 Gene3D Transferase(Phosphotransferase) domain 1 71 275 - -
Prci11g2345 312 FunFam Uncharacterized protein 5 70 - -
Prci11g2345 312 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 71 273 - -
Prci11g2345 312 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 291 - -
Prci11g2345 312 SMART serkin_6 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2345 Prci-Chr11 25058687 25060564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2345 8 279 Receptor kinase-like Gene Family AT4G11530 60.364 4.84e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2345 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2345 - - gmx:100812814 484.567