Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2344 ATGAAGGCGTCATCTGGTAAAGAGCTCGAGCTTGTTCTGATCATTTCTCTTCTCTTCCTTCTTCATTCATCTAGTCACTCTCTTGATAGAATAACCCCAAGCCAACCCCTCAAAGACGGCGACGTTTTGCTCTCCGACAAAGCAACCTTCGCACTTGGTTTTTTCAGTCCCACAAATAGTTCTAAAAACCGCTATGTTGGAATCTGGTATAACAAAGTTTCGACACAAACTCTTGTCTGGGTTGCTAATAGAGACCATCCTCTGAATGATACTTCTGGGTTTTTCTGGATTAACACCCATGGAAACGTCGTCGTCTCTCTCAATAATACAATCACCAAACTCGACCCGATTTGGTCTTCCAACGTTTCTCTCTCATCATCTTCCGCCAATACAATCTTCGCTAAGCTTCTCGACACAGGGAACTTGGTTTTGATGGAAGATGGTGGAAGCCAGAGAGTTCTATGGCAGAGTTTCGATGACCCTTGTGACACCCTGATGCCGTTCATGAAACTCGGATTAGACCGGAAAACCGGTTTGAACCGCTTCCTTACGTCATGGAAGTCCCCGGACGACCCAGGATCCGGGAACGTGAGCTATAGAATCGATCCAACAGGATATCCTCAACTGTTCATGTTCAGAAATGGGGATCCAATCTGGAGGGTCGGATCATGGACGGGCCAAAGATGGAGCGGTGTACCCGAGATGACACCCAACTTCATCTTCAGTGTCGTCTTTGTAAACAACGCTACTGAAGTGACTGTAATGTATGGTGTGAAGGACCCGTCCGTCTTCACCAGGATGGTACTTGAAAACTCGGGTCACGTGAGACGAACCACATGGCGAGCACAAGAACATAGATGGTTCGAGATCTGGAATGGCCCGAAAGAGGACTGCGACAACTATCGACGATGCGGGTCAAATAGTAACTGTGACCCGTACAACTTAGAGAAGTTCGAGTGTGAGTGTTTGCCCGGGTTCGAACCCAAGGACCCGAGAGAATGGTACCTCAGAGACGGGTCGGACGGGTGCGTGAGGAAGAAGAACGTGTCCACGTGTCGAAGCGGAGAGGGGTTCGTGAAGATGGCGCGTGTGAAAGTGCCTGATACGTCCAAAGCGCGTGTGGATTTGAGCGTGGATGTGAGCTTGAAGGCATGCGAGGAGAAATGCTTGAGGGATTGCTCCTGTGCGGCGTACACGAGTGCGAATGAGAGCTCCCAAACAGGGTGTATGACGTGGCACAATGACATGGAAGATATAAGAACTTACAGCAGTGTCGGACAGGACCTGTATGTACGGGTGGATGCAGTTGAGTTAGCCAAGCACAGAAAAAAGCCCTTTGGTTCACTTGGCATGAAGGGGATGGTTTCACTCCTAGTCGTTTCCATGTTACTAGTGACATTTCTGATGATCTCTTTCATATATTGGTTTGTAAAGAACAAGAAACAAGTAAGAAGAAGACATGGCAAAAATTTGCTCAACTACAACTTTGAGAACTCTCCCAGTATGGATGACTTTGATGGGGGGAAAAATTCAGATTTACCATTGTTTGATCTTATAGACATAGCTGCAGCAACAGAGAATTTCTCTGATGCTAACAAGCTTGGACAAGGAGGTTTTGGTTCGGTTTATAAGGGTCTGCTCAGTAATGGAATGGCAATAGCAGTGAAGAGGCTATCAAAGTACTCTGGACAAGGCATTGAGGAATTCAAAAATGAGGTTGTTTTAATTGCGAAGCTCCAACATAGGAATCTTGTGAGAATCTTGGGTTGTTGCATACAAGGAGAAGAGAAGATGTTGATCTATGAGTATTTGCCAAATAAAAGTTTGGACTTTTTCATATATGATCAAGTAAGGAAGTTACAACTAAACTGGAGCAAACGGTTTCATATCATATGCGGGGTTGCGAGGGGAATCTTATATCTCCATCAAGATTCAAGGTTAAGAATCATTCATAGAGACTTGAAGGCCAGTAATGTCTTATTAGACTCTTCATTAAATCCAAAAATTGCAGATTTTGGTATGGCCAGAATATTTGGAGGAGATCAAATTGAAGCAAACACAAAACGTGTTGTTGGAACCTATGGTTATATGTCACCAGAATATGCAATGGAAGGATTATTCTCAGTAAAATCTGACGTGTATAGTTTTGGAGTTTTGCTTCTAGAGATTGTTACTGGCAAAAAGAATAGTGGTCATTATGAAGAAATCACCTCAACTTTGGTCGGACATATTTGGGAACTATGGAGAGAAGGTAGAGCCATGGAGATTGTTGATTCATCACTAATAGACGAGGCATGCCTTGATGAGCTTCTAAAATGCATCCAAATTGGGCTTCTCTGTGTACAAGATTATGCAACAGACAGACCAACTATGTCTTCAGTTGTTTCCATGTTGGGAAGTGACTCAACTCTTCCTTCTCCTAAACAACCAGCATTTATTTTCAAAAGATCAAATACCTGTGACAATTCAAATCCATCAACCAGTGAAGGAGTTAATTCTGTAAATGAGATGAGTACTACTGTGATCGAAGCTCGCTAA 2538 0.4385 MKASSGKELELVLIISLLFLLHSSSHSLDRITPSQPLKDGDVLLSDKATFALGFFSPTNSSKNRYVGIWYNKVSTQTLVWVANRDHPLNDTSGFFWINTHGNVVVSLNNTITKLDPIWSSNVSLSSSSANTIFAKLLDTGNLVLMEDGGSQRVLWQSFDDPCDTLMPFMKLGLDRKTGLNRFLTSWKSPDDPGSGNVSYRIDPTGYPQLFMFRNGDPIWRVGSWTGQRWSGVPEMTPNFIFSVVFVNNATEVTVMYGVKDPSVFTRMVLENSGHVRRTTWRAQEHRWFEIWNGPKEDCDNYRRCGSNSNCDPYNLEKFECECLPGFEPKDPREWYLRDGSDGCVRKKNVSTCRSGEGFVKMARVKVPDTSKARVDLSVDVSLKACEEKCLRDCSCAAYTSANESSQTGCMTWHNDMEDIRTYSSVGQDLYVRVDAVELAKHRKKPFGSLGMKGMVSLLVVSMLLVTFLMISFIYWFVKNKKQVRRRHGKNLLNYNFENSPSMDDFDGGKNSDLPLFDLIDIAAATENFSDANKLGQGGFGSVYKGLLSNGMAIAVKRLSKYSGQGIEEFKNEVVLIAKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDFFIYDQVRKLQLNWSKRFHIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSSLNPKIADFGMARIFGGDQIEANTKRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVTGKKNSGHYEEITSTLVGHIWELWREGRAMEIVDSSLIDEACLDELLKCIQIGLLCVQDYATDRPTMSSVVSMLGSDSTLPSPKQPAFIFKRSNTCDNSNPSTSEGVNSVNEMSTTVIEAR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2344 845 SMART serkin_6 528 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2344 845 SUPERFAMILY Protein kinase-like (PK-like) 513 798 IPR011009 -
Prci11g2344 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 158 - -
Prci11g2344 845 CDD PAN_AP_plant 350 433 - -
Prci11g2344 845 Gene3D Transferase(Phosphotransferase) domain 1 604 807 - -
Prci11g2344 845 ProSiteProfiles Protein kinase domain profile. 528 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2344 845 Pfam D-mannose binding lectin 77 187 IPR001480 -
Prci11g2344 845 SMART ntp_6 353 433 IPR003609 -
Prci11g2344 845 SMART blect_4 34 161 IPR001480 -
Prci11g2344 845 ProSiteProfiles EGF-like domain profile. 294 332 IPR000742 -
Prci11g2344 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Prci11g2344 845 Pfam PAN-like domain 352 419 IPR003609 -
Prci11g2344 845 CDD STKc_IRAK 534 798 - -
Prci11g2344 845 Gene3D - 24 158 IPR036426 -
Prci11g2344 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 604 806 - -
Prci11g2344 845 CDD B_lectin 34 161 IPR001480 -
Prci11g2344 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 192 IPR036426 -
Prci11g2344 845 Pfam Protein tyrosine and serine/threonine kinase 532 798 IPR001245 GO:0004672|GO:0006468
Prci11g2344 845 ProSiteProfiles Bulb-type lectin domain profile. 28 157 IPR001480 -
Prci11g2344 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 494 603 - -
Prci11g2344 845 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Prci11g2344 845 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 789 - -
Prci11g2344 845 Pfam Domain of unknown function (DUF3403) 801 845 IPR021820 GO:0004674
Prci11g2344 845 Gene3D Phosphorylase Kinase; domain 1 501 603 - -
Prci11g2344 845 Pfam S-locus glycoprotein domain 219 329 IPR000858 GO:0048544
Prci11g2344 845 ProSiteProfiles PAN/Apple domain profile. 352 434 IPR003609 -
Prci11g2344 845 PIRSF SRK 4 845 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2344 Prci-Chr11 25058687 25064552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2344 468 817 Receptor kinase-like Gene Family AT3G45860 54.802 3.78e-128 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2344 PK_Tyr_Ser-Thr 7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2344 - - gmx:100812814 1213.36