Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2343 ATGAAAGTGTTTTCTGCTAAACGCATGGTTCTGGTCTCTACTCTATTATTGCTTCTCTTTCTCCTTCATTCTTCTTGTGATTCACTTGATAGAATAACCCCAAGCCAACCCCTTAGAGATGGCGATATTTTGCTCTCCTACCAAGCAACCTTTGCCCTCGGTTTCTTCACCCCCAGCAACAATTCCAGAAACCGCTATGTCGGAATATGGTTTCATAGATTCTCTAAACAAACCCTAGTTTGGGTAGCCAATAGAGAAAATCCTGTTAATGATACTTCTGGAGTTTTATCTATCAGTGCCCATGGAAACATGGTTGTTCTTGCTCTTAATGATATAAATTCTAACCTGAACCCTATTTGGTCTTCCAGTGTTTCCATCACATCTTCCAATGAAACCTACTTTGCTAAGCTTCTAGACATAGGAAACTTGGTTTTAGGTAAAAATGGAGGAAGGCATGAAAAGGTTTTGTGGCAGAGTTTTGATTATCCAACTGACACAATCCTTCCATTTATGAAGCTCGGGTTGGACCGCAGAACCGGGTTCAACTGGTTCCTTAGGTCATGGAGATCCCCCCACGACCCAAGATTTGGGAACATGAGTCATAGGATCAACCCAACAGGATATCCTCAAATATTCACTTACAAAAACGGAACTCCATTTTGGCGATGTGGGTCTTGGACGGGTCAAAGATGGAGTGGCATACCTGTCATGACACCTAATTTCGTCTTCAACGTTAGCTATGTTGACAATGCCAATGAAGTTTCCATAATGATTGGGATTCGAGACCCTACGATCTTCTTAAGAATGGTCCTCGACAATGATGGTCTAATTAGACGAACAATCTGGCAAGCTAAAGAGCATAGATGGTTTGAAATTTGGTCGGGTCCGACAGAGGATTGCGACAACTATCGAAGATGCGGGTCAAATAGCATATGTGACCCATATACAAGCAACAAACTTGAGTGTGTGTGTTTGCCTGGATATGTGAGAAACGGGTCGAGTGGATGTGTGAGGAAGAAGAATGTGTCCACGTGTCGAAATGGGGAGGGGTTTGTGAAGGTTGCACTTGTGAAGGTTCCAGATACGTCAACGGCACGTGTGGATAAGAATATGAGCTTGTACTTGAAAGGATGTGAAGGGAAGTGCTTGAAGGATTGTTCATGTGTAGCGTATACGAGTTTAAATGAGGTAACGCAAAGTGGGTGCTTGACATGGCATGCTGATATGGAAGATATTAGGAGATTCAATCATGTGGGACAAGAACTGTACGTGCGTGTTGATGCAGCTGAAATGGCTAAATATGAAAAGAAGCCTTATGGTTCTCTTGGCAAGAGGGGGATGGTAGCACTTGTGGTTGTTTCTACCTTCCTATTAATGTTCATGTTGATCTCCTTTGTGTATTGGTTTGCAAAGAAAAAGGAACAAGAACAAAGAAGGCCTAGCGAACATTTGCTTGACGGAGAAAATAATTCAGATTTACCGTTATTTGATCTAAATGATATAGTTGAAGCAACAAGCAATTTCTCGGATGCTAACAAGCTTGGGCAAGGAGGTTTTGGCTCTGTTCATAAGGGTGTACTCAACGATGGAACGACAATAGCAGTGAAGAGGCTGTTAAAGTACTCTGGACAAGGCATTGAAGAATTCAAAAATGAGATTGCTTTAATTGCCAAGCTCCAACATAGAAATCTTGTAAGGATCTTAGGATGCTGCATCGAAGGAGAAGAGAAGATGTTGATCTACGAATACTTGCCAAACAACAGCTTAGACTCTTTCATTTTCGATCATGCAAAAAAATTGCAATTACATTGGAGGAAACGATTTGATATCATTTGTGGAATTGCAAGAGGCATTTTATATCTTCATCAACATTCGAGATTAAGGATAATTCATAGAGATTTAAAGGCCAGTAATATCTTGTTGGACTCTACATTGAACCCAAAAATTGCAGATTTTGGCATGGCTAGAATATTTGGTGGAGACCAAATTGAAGCAAGCACTAATTATGTTGTTGGAACCTAA 2022 0.4095 MKVFSAKRMVLVSTLLLLLFLLHSSCDSLDRITPSQPLRDGDILLSYQATFALGFFTPSNNSRNRYVGIWFHRFSKQTLVWVANRENPVNDTSGVLSISAHGNMVVLALNDINSNLNPIWSSSVSITSSNETYFAKLLDIGNLVLGKNGGRHEKVLWQSFDYPTDTILPFMKLGLDRRTGFNWFLRSWRSPHDPRFGNMSHRINPTGYPQIFTYKNGTPFWRCGSWTGQRWSGIPVMTPNFVFNVSYVDNANEVSIMIGIRDPTIFLRMVLDNDGLIRRTIWQAKEHRWFEIWSGPTEDCDNYRRCGSNSICDPYTSNKLECVCLPGYVRNGSSGCVRKKNVSTCRNGEGFVKVALVKVPDTSTARVDKNMSLYLKGCEGKCLKDCSCVAYTSLNEVTQSGCLTWHADMEDIRRFNHVGQELYVRVDAAEMAKYEKKPYGSLGKRGMVALVVVSTFLLMFMLISFVYWFAKKKEQEQRRPSEHLLDGENNSDLPLFDLNDIVEATSNFSDANKLGQGGFGSVHKGVLNDGTTIAVKRLLKYSGQGIEEFKNEIALIAKLQHRNLVRILGCCIEGEEKMLIYEYLPNNSLDSFIFDHAKKLQLHWRKRFDIICGIARGILYLHQHSRLRIIHRDLKASNILLDSTLNPKIADFGMARIFGGDQIEASTNYVVGT 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2343 673 ProSiteProfiles Bulb-type lectin domain profile. 29 158 IPR001480 -
Prci11g2343 673 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Prci11g2343 673 SMART serkin_6 508 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2343 673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 160 - -
Prci11g2343 673 Gene3D - 26 160 IPR036426 -
Prci11g2343 673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 472 583 - -
Prci11g2343 673 ProSiteProfiles Protein kinase domain profile. 508 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2343 673 Gene3D Transferase(Phosphotransferase) domain 1 584 673 - -
Prci11g2343 673 SMART ntp_6 346 426 IPR003609 -
Prci11g2343 673 SMART blect_4 35 163 IPR001480 -
Prci11g2343 673 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 194 IPR036426 -
Prci11g2343 673 CDD B_lectin 35 163 IPR001480 -
Prci11g2343 673 SUPERFAMILY Protein kinase-like (PK-like) 493 673 IPR011009 -
Prci11g2343 673 Pfam D-mannose binding lectin 78 189 IPR001480 -
Prci11g2343 673 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Prci11g2343 673 CDD TIL 303 341 - -
Prci11g2343 673 Pfam PAN-like domain 345 412 IPR003609 -
Prci11g2343 673 Gene3D Phosphorylase Kinase; domain 1 468 583 - -
Prci11g2343 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Prci11g2343 673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 584 673 - -
Prci11g2343 673 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 669 - -
Prci11g2343 673 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Prci11g2343 673 CDD PAN_AP_plant 346 426 - -
Prci11g2343 673 Pfam Protein tyrosine and serine/threonine kinase 512 658 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2343 Prci-Chr11 25009587 25014095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2343 446 673 Receptor kinase-like Gene Family AT4G23190 53.947 5.01e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2343 PK_Tyr_Ser-Thr 3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2343 - - pcin:129286370 1014.6