Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2342 ATGAAAGTGTTTTCTGCTAAACGCATGGTTCTGGTCTCTACTCTATTATTGCTTCTCTTTCTCCTTCATTCTTCTTGTGATTCACTTGATAGAATAACCCCAAGCCAACCCCTTAGAGATGGCGATATTTTGCTCTCCTACCAAGCAACCTTTGCCCTCGGTTTCTTCACCCCCAGCAACAATTCCAGAAACCGCTATGTCGGAATATGGTTTCATAGATTCTCTAAACAAACCCTAGTTTGGGTAGCCAATAGAGAAAATCCTGTTAATGATACTTCTGGAGTTTTATCTATCAGTGCCCATGGAAACATGGTTGTTCTTGCTCTTAATGATATAAATTCTAACCTGAACCCTATTTGGTCTTCCAGTGTTTCCATCACATCTTCCAATGAAACCTACTTTGCTAAGCTTCTAGACATAGGAAACTTGGTTTTAGGTAAAAATGGAGGAAGGCATGAAAAGGTTTTGTGGCAGAGTTTTGATTATCCAACTGACACAATCCTTCCATTTATGAAGCTCGGGTTGGACCGCAGAACCGGGTTCAACTGGTTCCTTAGGTCATGGAGATCCCCCCACGACCCAAGATTTGGGAACATGAGTCATAGGATCAACCCAACAGGATATCCTCAAATATTCACTTACAAAAACGGAACTCCATTTTGGCGATGTGGGTCTTGGACGGGTCAAAGATGGAGTGGCATACCTGTCATGACACCTAATTTCGTCTTCAACGTTAGCTATGTTGACAATGCCAATGAAGTTTCCATAATGATTGGGATTCGAGACCCTACGATCTTCTTAAGAATGGTCCTCGACAATGATGGTCTAATTAGACGAACAATCTGGCAAGCTAAAGAGCATAGATGGTTTGAAATTTGGTCGGGTCCGACAGAGGATTGCGACAACTATCGAAGATGCGGGTCAAATAGCATATGTGACCCATATACAAGCAACAAACTTGAGTGTGTGTGTTTGCCTGGATATGTGAGAAACGGGTCGAGTGGATGTGTGAGGAAGAAGAATGTGTCCACGTGTCGAAATGGGGAGGGGTTTGTGAAGGTTGCACTTGTGAAGGTTCCAGATACGTCAACGGCACGTGTGGATAAGAATATGAGCTTGTACTTGAAAGGATGTGAAGGGAAGTGCTTGAAGGATTGTTCATGTGTAGCGTATACGAGTTTAAATGAGGTAACGCAAAGTGGGTGCTTGACATGGCATGCTGATATGGAAGATATTAGGAGATTCAATCATGTGGGACAAGAACTGTACGTGCGTGTTGATGCAGCTGAAATGGCTAAATATGAAAAGAAGCCTTATGGTTCTCTTGGCAAGAGGGGGATGGTAGCACTTGTGGTTGTTTCTACCTTCCTATTAATGTTCATGTTGATCTCCTTTGTGTATTGGTTTGCAAAGAAAAAGGAACAAGAACAAAGAAGGCCTAGCGAACATTTGCTTGACGGAGAAAATAATTCAGATTTACCGTTATTTGATCTAAATGATATAGTTGAAGCAACAAGCAATTTCTCGGATGCTAACAAGCTTGGGCAAGGAGGTTTTGGCTCTGTTCATAAGGGTGTACTCAACGATGGAACGACAATAGCAGTGAAGAGGCTGTTAAAGTACTCTGGACAAGGCATTGAAGAATTCAAAAATGAGATTGCTTTAATTGCCAAGCTCCAACATAGAAATCTTGTAAGGATCTTAGGATGCTGCATCGAAGGAGAAGAGAAGATGTTGATCTACGAATACTTGCCAAACAACAGCTTAGACTCTTTCATTTTCGATCATGCAAAAAAATTGCAATTACATTGGAGGAAACGATTTGATATCATTTGTGGAATTGCAAGAGGCATTTTATATCTTCATCAACATTCGAGATTAAGGATAATTCATAGAGATTTAAAGGCCAGTAATATCTTGTTGGACTCTACATTGAACCCAAAAATTGCAGATTTTGGCATGGCTAGAATATTTGGTGGAGACCAAATTGAAGCAAGCACTAATTATGTTGTTGGAACCTATGGTTACATGTCACCTGAATATGCAATGGAAGGATTGTTCTCAATAAAGTCAGATGTATATAGCTTTGGGGTTTTACTTCTTGAGATTGTTACTAGCAGAAAGAATAGTGGCCATTATGATGACATCCCTTCTACTTTGGTTGGACATATTTGGGACCTATGGAGAGGAAGCAGAGCCATGGAAATTGTTGATCCAGCATTAACGGATAAGCCATGCCTTGAACATGAATTTCTAAAATGCATCCAGATTGGACTATTATGTGTACAAGAGTACGCATCAGATAGACCAGCTATGTCAGAAGTTGTTTCCATGTTGGAGAATGACTCAAATCTTCTTCCCCCTAAACAACCAGCTTTTGTTTTCAAGAGAACTACTTGTGATCATTCAAACCCATCAGTTGGTGAAGAAGTTCATTCGGTGAATGGAATGAGTACTACAGTGATTGAAGCTCGCTGA 2478 0.4072 MKVFSAKRMVLVSTLLLLLFLLHSSCDSLDRITPSQPLRDGDILLSYQATFALGFFTPSNNSRNRYVGIWFHRFSKQTLVWVANRENPVNDTSGVLSISAHGNMVVLALNDINSNLNPIWSSSVSITSSNETYFAKLLDIGNLVLGKNGGRHEKVLWQSFDYPTDTILPFMKLGLDRRTGFNWFLRSWRSPHDPRFGNMSHRINPTGYPQIFTYKNGTPFWRCGSWTGQRWSGIPVMTPNFVFNVSYVDNANEVSIMIGIRDPTIFLRMVLDNDGLIRRTIWQAKEHRWFEIWSGPTEDCDNYRRCGSNSICDPYTSNKLECVCLPGYVRNGSSGCVRKKNVSTCRNGEGFVKVALVKVPDTSTARVDKNMSLYLKGCEGKCLKDCSCVAYTSLNEVTQSGCLTWHADMEDIRRFNHVGQELYVRVDAAEMAKYEKKPYGSLGKRGMVALVVVSTFLLMFMLISFVYWFAKKKEQEQRRPSEHLLDGENNSDLPLFDLNDIVEATSNFSDANKLGQGGFGSVHKGVLNDGTTIAVKRLLKYSGQGIEEFKNEIALIAKLQHRNLVRILGCCIEGEEKMLIYEYLPNNSLDSFIFDHAKKLQLHWRKRFDIICGIARGILYLHQHSRLRIIHRDLKASNILLDSTLNPKIADFGMARIFGGDQIEASTNYVVGTYGYMSPEYAMEGLFSIKSDVYSFGVLLLEIVTSRKNSGHYDDIPSTLVGHIWDLWRGSRAMEIVDPALTDKPCLEHEFLKCIQIGLLCVQEYASDRPAMSEVVSMLENDSNLLPPKQPAFVFKRTTCDHSNPSVGEEVHSVNGMSTTVIEAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2342 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Prci11g2342 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 472 583 - -
Prci11g2342 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 770 - -
Prci11g2342 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 160 - -
Prci11g2342 825 Pfam Protein tyrosine and serine/threonine kinase 512 779 IPR001245 GO:0004672|GO:0006468
Prci11g2342 825 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Prci11g2342 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 194 IPR036426 -
Prci11g2342 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Prci11g2342 825 ProSiteProfiles Protein kinase domain profile. 508 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2342 825 CDD PAN_AP_plant 346 426 - -
Prci11g2342 825 Gene3D Transferase(Phosphotransferase) domain 1 584 787 - -
Prci11g2342 825 SMART serkin_6 508 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2342 825 ProSiteProfiles Bulb-type lectin domain profile. 29 158 IPR001480 -
Prci11g2342 825 Gene3D Phosphorylase Kinase; domain 1 468 583 - -
Prci11g2342 825 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Prci11g2342 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Prci11g2342 825 SUPERFAMILY Protein kinase-like (PK-like) 487 780 IPR011009 -
Prci11g2342 825 Pfam PAN-like domain 345 412 IPR003609 -
Prci11g2342 825 SMART ntp_6 346 426 IPR003609 -
Prci11g2342 825 SMART blect_4 35 163 IPR001480 -
Prci11g2342 825 CDD B_lectin 35 163 IPR001480 -
Prci11g2342 825 Pfam Domain of unknown function (DUF3403) 783 825 IPR021820 GO:0004674
Prci11g2342 825 CDD TIL 303 341 - -
Prci11g2342 825 CDD STKc_IRAK 514 781 - -
Prci11g2342 825 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Prci11g2342 825 Gene3D - 26 160 IPR036426 -
Prci11g2342 825 Pfam D-mannose binding lectin 78 189 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2342 Prci-Chr11 25009210 25014095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2342 447 793 Receptor kinase-like Gene Family AT4G23230 53.276 1.28e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2342 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2342 - - pcin:129286370 1290.02