Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2330 ATGAAAATTGGGTTTGATCGAAAAACTGGTTTCAATAGGGTCATTACATCATGGAGATCCCATGATGATCCTAGTATTGGGAACATGAGCTTCAGCATCGACCCACCAGGCTATCCTCAACTGTTCACATATGAAAACGGAGCTCCATTTTGGCGATGGGGATCTTGGACGGGTCAAAGATGGAGTGGGATACCACATATGACACCCAATTTTGTGTTCAACATTAGTTATGTTGATGATGCTAATCAAGTTTCCATAACAGTTAGTGTCCTAGACCCTTCAGTGTTCTTCAGAATGGTGATGGACAACACTGGTCACTTTTCACGAACAATTTGGCAAGCTAAAGAGCAAAGATGGCTTGAAATTTGGTCTGGTCCAACAGATGACTGTGACAACTACAGAAAGTGTGGATCAAACAGCATCTGTGATGTGTATAATAATAAAAACAGCACATTCGAGTGTGTATGTTTGCCAGGATTTGAACCCAGGAACTCGCGAGAGTGGTCTGATGGGAACGGATCGGGTGGGTGTGTGAGGAAGAAGAATGTGTCCACGTGTCAAAACGGCGAGGGGTTTGTGAAGTTAGCACCTGTGAAGGTTCCAGATACGTCAAAGGCACGTGCGGATAAGAGTAAGAGCTTGAGCTTGGAAGGGTGTGAAGAGAAGTGCCTAAGGGATTGTTCGTGTGTAGCTTACACAAGTGCCAACGAGGTCAAGCAAAGTGGGTGCATAACATGGTATGCTGATATGGAAGATATCAGGACATTCAACAATGTGGGACAAGAATTGTACGTACGTGTGGATGCGACTGAACTAGCTAAATATGAAAAAAGGCCTTATGGCTTACTTGGCAAGAGGGGGATTGTGACACTTATAGTTGTTTCTCCCTGCCTAACAATGTTCATGGTCATCTCTCTTGTGTTTTGTTTGGCAAAGAACAAGGAACAAGCACAAACAAGAATTAAGGAACATTTGCTTGATGGAGAAAACAGTGAAGATTTACCTTTATTTGATCTGAGTGACATAGTTGAAGCAACAAACAATTTCTCGGATGCTAACAAGCTTGGGCAAGGGGGTTTTGGTTCTGTTCATAAGGGTCTACTTGGTTGTGGAACAACAATAGCAGTGAAGAGGTTGTTAAAGTATTCTGGACAAGGTGTTGAAGAGTTCAAAAATGAGATCGTTCTGATTGCAAAGCTCCAACATAGAAATCCTGTCAGGATCTTAGGATGTTGCATCCAAGGAGAAGAGAAGATGTTGATCTATGAATATTTACCAAACAAAAGCTTAGACTCTTTCATTTTCGTGGTTACATGTCACCTGAATATGCAATGGAAGGATTGTTTTCAATAA 1353 0.4198 MKIGFDRKTGFNRVITSWRSHDDPSIGNMSFSIDPPGYPQLFTYENGAPFWRWGSWTGQRWSGIPHMTPNFVFNISYVDDANQVSITVSVLDPSVFFRMVMDNTGHFSRTIWQAKEQRWLEIWSGPTDDCDNYRKCGSNSICDVYNNKNSTFECVCLPGFEPRNSREWSDGNGSGGCVRKKNVSTCQNGEGFVKLAPVKVPDTSKARADKSKSLSLEGCEEKCLRDCSCVAYTSANEVKQSGCITWYADMEDIRTFNNVGQELYVRVDATELAKYEKRPYGLLGKRGIVTLIVVSPCLTMFMVISLVFCLAKNKEQAQTRIKEHLLDGENSEDLPLFDLSDIVEATNNFSDANKLGQGGFGSVHKGLLGCGTTIAVKRLLKYSGQGVEEFKNEIVLIAKLQHRNPVRILGCCIQGEEKMLIYEYLPNKSLDSFIFVVTCHLNMQWKDCFQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2330 450 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Prci11g2330 450 Pfam PAN-like domain 186 253 IPR003609 -
Prci11g2330 450 Pfam S-locus glycoprotein domain 51 163 IPR000858 GO:0048544
Prci11g2330 450 CDD PAN_AP_plant 187 267 - -
Prci11g2330 450 Gene3D Phosphorylase Kinase; domain 1 309 424 - -
Prci11g2330 450 SMART ntp_6 187 267 IPR003609 -
Prci11g2330 450 ProSiteProfiles PAN/Apple domain profile. 186 268 IPR003609 -
Prci11g2330 450 Pfam Protein tyrosine and serine/threonine kinase 353 435 IPR001245 GO:0004672|GO:0006468
Prci11g2330 450 SUPERFAMILY Protein kinase-like (PK-like) 326 439 IPR011009 -
Prci11g2330 450 ProSiteProfiles EGF-like domain profile. 126 166 IPR000742 -
Prci11g2330 450 CDD EGF_CA 128 164 - -
Prci11g2330 450 ProSiteProfiles Protein kinase domain profile. 349 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2330 450 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 424 - -
Prci11g2330 450 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2330 Prci-Chr11 24744109 24748899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2330 289 435 Receptor kinase-like Gene Family AT4G04500 50.340 4.18e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2330 S_locus_glycop 1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2330 - - pcin:129285354 946.421