Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2323 ATGGGTGAGGAGTTTCAAGCTGGGATTTGTGGTGGGAATAATTACTGGTGGATGAACAACAACATGATGATGATGAACCCAACAACAACACAAAGTGTTTTCCCTTTGACGATGATGAGTTCATCTCCGTGTTCTGTACTTACAGGTAACAACGATCTTTCAGGAGGAGGGATGATCGGCTACAGCACATGGCAGACTGATACGGTGGACCTGATCAAGGCTCCGACGAGGACGACGACGACAGAGACGGCCACGGCGACCGTGGCGAACTCTGGTTCTGATATCTCTCCGGGGTTTCTAGATGCGACGACGACGACGAAGCCACAGCTTCATCAGAATCATCATCATCATCATCAGACTGGTGAAGCTGATATTGCAGACAATCATCATCATAATGGTTCCATCTTGATGGATTCGACCTTCGAAATGATGGGTTTTGGTCTCTCTTCGAATTGGAATCATTCTCTCTTTGGTAATTCTTCATCACATGCCCAAGATCAGAAGAGAGATCAAATCTCCATGAAGAATCAAGATTTATGTGGTGGTGGTAATTTCTCAGTTGGGTCTGTGCCAGTTTCTCCCTCGTCGTCACCATTTGGATGCCTTTCTAATAATAATAATAATTCCTCAAGTTCGACGTTGATTCGGAGTCTTTATGATATTCCTCATCATCAACCACAAGTAGCACAGCCACTTTTCACCAACCCAATACCACCATCTTCCATGGCCTATTCTTCAAGTACAGCGAATATTGGCTCAATATCTAATTCCACTGAGTTGATCCCTTCACCAACAACTACAAATACTACCACTTCTTCGTCTTCGTCTTCGTCTTCTTCTTCATGGCCCAGACCCTCTAATAATAATAATAATAATAATTCCTTCTTGAAGCCTACTGGTGGCTTGCACTTTTCTAACAGTACTGCTTTCTGGAATGCTGCTGCTGAAACACCACATGTTTTTGCTCCTTCTTTAATAACTGAGAAACCCAATTTCACAAACTCTCTCATACCCAAGCCCAAGAGAGAAGAAGCTTTGGACTCATCCGGGAAGAACTCGTGTGAACCTGCAATCAAGAAGCAAAGAATTGAAACGCCTTCACCATTACCCACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGAGTCACTGCTCTTCAGCAATTGGTGTCGCCTTTCGGAAAGACTGATACAGCATCTGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTGCATGATCAAGTCAGTGTTTTGAGCACTCCTTACATGAAAAATGGAGTTCCCATCCAACACTTCCAACAGGGTTGTGATGTGAAGGAATCATCAAAAGGGCCAAAACAAGACTTGAAAAGCAGAGGGCTGTGTTTGGTTCCGATTTCAAGCACATTCCCAGTCACAAACGAAACCCATGTGGATTTCTGGACGCCATCATTTGCAGGGACACTCATCAGTAGATAG 1461 0.4422 MGEEFQAGICGGNNYWWMNNNMMMMNPTTTQSVFPLTMMSSSPCSVLTGNNDLSGGGMIGYSTWQTDTVDLIKAPTRTTTTETATATVANSGSDISPGFLDATTTTKPQLHQNHHHHHQTGEADIADNHHHNGSILMDSTFEMMGFGLSSNWNHSLFGNSSSHAQDQKRDQISMKNQDLCGGGNFSVGSVPVSPSSSPFGCLSNNNNNSSSSTLIRSLYDIPHHQPQVAQPLFTNPIPPSSMAYSSSTANIGSISNSTELIPSPTTTNTTTSSSSSSSSSSWPRPSNNNNNNNSFLKPTGGLHFSNSTAFWNAAAETPHVFAPSLITEKPNFTNSLIPKPKREEALDSSGKNSCEPAIKKQRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNGVPIQHFQQGCDVKESSKGPKQDLKSRGLCLVPISSTFPVTNETHVDFWTPSFAGTLISR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2323 486 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 165 465 - -
Prci11g2323 486 MobiDBLite consensus disorder prediction 108 131 - -
Prci11g2323 486 FunFam Transcription factor bHLH123 family 373 435 - -
Prci11g2323 486 MobiDBLite consensus disorder prediction 255 299 - -
Prci11g2323 486 Gene3D - 373 426 IPR036638 GO:0046983
Prci11g2323 486 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 363 412 IPR011598 GO:0046983
Prci11g2323 486 CDD bHLH_AtbHLH_like 369 420 IPR045239 -
Prci11g2323 486 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 373 431 IPR036638 GO:0046983
Prci11g2323 486 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2323 Prci-Chr11 24575315 24579449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2323 95 481 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.864 7.12e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2323 - - pcin:129287171 852.818