Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2322 ATGGGTGAGGAGTTTCAAGCTGGGATTTGTGGTGGGAATAATTACTGGTGGATGAACAACAACATGATGATGATGAACCCAACAACAACACAAAGTGTTTTCCCTTTGACGATGATGAGTTCATCTCCGTGTTCTGTACTTACAGGTAACAACGATCTTTCAGGAGGAGGGATGATCGGCTACAGCACATGGCAGACTGATACGGTGGACCTGATCAAGGCTCCGACGAGGACGACGACGACAGAGACGGCCACGGCGACCGTGGCGAACTCTGGTTCTGATATCTCTCCGGGGTTTCTAGATGCGACGACGACGACGAAGCCACAGCTTCATCAGAATCATCATCATCATCATCAGACTGGTGAAGCTGATATTGCAGACAATCATCATCATAATGGTTCCATCTTGATGGATTCGACCTTCGAAATGATGGGTTTTGGTCTCTCTTCGAATTGGAATCATTCTCTCTTTGGTAATTCTTCATCACATGCCCAAGATCAGAAGAGAGATCAAATCTCCATGAAGAATCAAGATTTATGTGGTGGTGGTAATTTCTCAGTTGGGTCTGTGCCAGTTTCTCCCTCGTCGTCACCATTTGGATGCCTTTCTAATAATAATAATAATTCCTCAAGTTCGACGTTGATTCGGAGTCTTTATGATATTCCTCATCATCAACCACAAGTAGCACAGCCACTTTTCACCAACCCAATACCACCATCTTCCATGGCCTATTCTTCAAGTACAGCGAATATTGGCTCAATATCTAATTCCACTGAGTTGATCCCTTCACCAACAACTACAAATACTACCACTTCTTCGTCTTCGTCTTCGTCTTCTTCTTCATGGCCCAGACCCTCTAATAATAATAATAATAATAATTCCTTCTTGAAGCCTACTGGTGGCTTGCACTTTTCTAACAGTACTGCTTTCTGGAATGCTGCTGCTGAAACACCACATGTTTTTGCTCCTTCTTTAATAACTGAGAAACCCAATTTCACAAACTCTCTCATACCCAAGCCCAAGAGAGAAGAAGCTTTGGACTCATCCGGGAAGAACTCGTGTGAACCTGCAATCAAGAAGCAAAGAATTGAAACGCCTTCACCATTACCCACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGAGTCACTGCTCTTCAGCAATTGGTGTCGCCTTTCGGAAAGACTGATACAGCATCTGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTGCATGATCAAGTTTTGAGCACTCCTTACATGAAAAATGGAGTTCCCATCCAACACTTCCAACAGGGTTGTGATGTGAAGGAATCATCAAAAGGGCCAAAACAAGACTTGAAAAGCAGAGGGCTGTGTTTGGTTCCGATTTCAAGCACATTCCCAGTCACAAACGAAACCCATGTGGATTTCTGGACGCCATCATTTGCAGGGACACTCATCAGTAGATAG 1455 0.4419 MGEEFQAGICGGNNYWWMNNNMMMMNPTTTQSVFPLTMMSSSPCSVLTGNNDLSGGGMIGYSTWQTDTVDLIKAPTRTTTTETATATVANSGSDISPGFLDATTTTKPQLHQNHHHHHQTGEADIADNHHHNGSILMDSTFEMMGFGLSSNWNHSLFGNSSSHAQDQKRDQISMKNQDLCGGGNFSVGSVPVSPSSSPFGCLSNNNNNSSSSTLIRSLYDIPHHQPQVAQPLFTNPIPPSSMAYSSSTANIGSISNSTELIPSPTTTNTTTSSSSSSSSSSWPRPSNNNNNNNSFLKPTGGLHFSNSTAFWNAAAETPHVFAPSLITEKPNFTNSLIPKPKREEALDSSGKNSCEPAIKKQRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVLSTPYMKNGVPIQHFQQGCDVKESSKGPKQDLKSRGLCLVPISSTFPVTNETHVDFWTPSFAGTLISR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2322 484 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 373 418 IPR036638 GO:0046983
Prci11g2322 484 Gene3D - 373 424 IPR036638 GO:0046983
Prci11g2322 484 MobiDBLite consensus disorder prediction 108 131 - -
Prci11g2322 484 MobiDBLite consensus disorder prediction 255 299 - -
Prci11g2322 484 CDD bHLH_AtbHLH_like 369 416 IPR045239 -
Prci11g2322 484 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 165 463 - -
Prci11g2322 484 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 363 412 IPR011598 GO:0046983
Prci11g2322 484 FunFam Transcription factor bHLH123 family 373 433 - -
Prci11g2322 484 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2322 Prci-Chr11 24575314 24579449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2322 95 479 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.621 3.08e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2322 - - pcin:129287171 844.728