Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2307 ATGAAGCTTCATTCATTTTACATTCTGCTACTATCTGTGCTTTCTGCAACACTTCATTGTTTCTGCCAACAAGAATATCTTAACAACACTGTCTACGATTGCTCTTTCAACCTCACAACAACTGCAGGATATGTCTGCAATGGCCTCCAAAAGTCATGCACTTCCTTTGTAACTTTCAGATCAAGACCTCCTTATGACACCCCCCTAAGCATTGCCAATCTTCTTGGCTCTGAAGCATCTTCCATAGCCTCCATCAACAACATCTCAAGCAGCAGCAACAACATTGCTTCCAATCGAACCGTGATTGTTCCGGTCTATTGTTCATGTTCAGGCAATATCTACCAGCATGCCACTTCTTATGACATGAAAAGAGGAGATTACTACTTCAAATTGGCCAACAAGACTTATCAAGGCCTTGTTAATTGTCAGATGTTAGTACGTCAGAATTATTACCTTCCTGTCAATATCAGTGTTGGTGCTCAAGTTACAGTTCCTATGTTGTGTACTTGTCCCACAGCAAAACAGATCTCAGATGTCTCCTCCTTGCTGGTTCATACCCTTGACTATGGAGATTCACTTGAGTCAGTTGCAGAGACCTATGGTGTGGATCAACACAGTCTGATAATTGCTAATGAATTGTCTTCAAATGCCACTATCTCTCCTTTGACCCCTCTTTTAGTTCCCCTTAAACCCTCCTCTTGTAAACTCAACTCAAGTATGTTCTTCTGTACCTGTTCATTCTCTCAGATTTACCTTCCAAATTCAAGTTCCAACGCTCTCAATTGTGGTCATCTTCAACCTGATTCTCATCATTTTCCACTCAGATTGGTTGCTTCCATAGGTGTTGGTACTGGTGCAGGCTTTTTGTGCTTATTTCTTTTGGGTTACAAGTTACATGAATGGCTTAAAAAAAAGAAAGAAAGAGTTCTCAAGGAAAAATTGTTTAGGCAAAATGGAGGTCTATTGCTGCAAGAAAAGATGTCACATTATGGAAACAGAGACAAAGCAAAACTTTTTACAGCAGAAGAACTGAAACGAGCAACAGATAATTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGGTATGGAACTGTTTACAAAGGAATGTTACCAGATGGTACCATTGTTGCAGTCAAGAAGTCAAGAGAAATAGTGAGAAACCAGATTGAGACTTTTGTTAATGAAGTGGTGATTCTATCCCAAATAAACCATAGGAACATTGTCAAACTCTTGGGTTGTTGCCTTGAGACTGAAGCTCCATTATTAGTTTATGAATTTATTCCCAATGGAACACTTTCTTACCATATCCATGACCGAGAATTTAAATCAAACCTTTCATGGGAAAACCTTAGAATCGCTTGCGAGGTTGCCGGGGCAGTTGCATATATGCATTTTGCAGCTTCCATTCCCATCTTCCATAGAGACATAAAAACTTCCAACATACTCTTGGATCATAATTACAACGCCAAAGTGTCTGATTTTGGGTCTTCCAGATCAGTTCCCCAAGATAGGACTCACTTAACAACAGCAGTACAAGGAACTTTTGGGTACATTGATCCTGTATACTTCCAATCCAGCCAATTCACAGATAAAAGCGATGTATATAGTTTTGGGGTTGTACTTGTAGAACTCATTACTGGAAGAAAACCCTTCTCAGAACAAGCTGAGGGACAGAACCTTGTTGCAGAATTCATTTCTTTGATGAGGAATAATGACCAAGTTTTCAAGATTTTAGATGCTAGAGTTGTTAGTGAAGGAAGGAAGGATGATATTCTTAGCATTGCAAATCTTGCAATGAGATGCTTGAGACTCAATAGGAGGAAGAGACCCACAATGAGAGTGGTTTCAGCAGAGCTAGAAGCACTGAGAATGACACAAGATTCCTTAGAGATTGCTGAATGTTCTATTGAGTTTCAAAATGATAATGACACGACCTCTTCTTTTGAAACAATCCAAGAATCCACAGAAGAAAGCATGTCATTATTTCTCCAGATGGACTCCACATCCATCTGA 2013 0.3954 MKLHSFYILLLSVLSATLHCFCQQEYLNNTVYDCSFNLTTTAGYVCNGLQKSCTSFVTFRSRPPYDTPLSIANLLGSEASSIASINNISSSSNNIASNRTVIVPVYCSCSGNIYQHATSYDMKRGDYYFKLANKTYQGLVNCQMLVRQNYYLPVNISVGAQVTVPMLCTCPTAKQISDGXSSLLVHTLDYGDSLESVAETYGVDQHSLIIANELSSNATISPLTPLLVPLKPSSCKLNSSMFFCTCSFSQIYLPNSSSNALNCGHLQPDSHHFPLRLVASIGVGTGAGFLCLFLLGYKLHEWLKKKKERVLKEKLFRQNGGLLLQEKMSHYGNRDKAKLFTAEELKRATDNYNQSRFLGQGGYGTVYKGMLPDGTIVAVKKSREIVRNQIETFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLSYHIHDREFKSNLSWENRXRIACEVAGAVAYMHFAASIPIFHRDIKTSNILLDHNYNAKVSDFGSSRSVPQDRTHLTTAVQGTFGYIDPVYFQSSQFTDKSDVYSFGVVLVELITGRKPFSEQAEGQNLVAEFISLMRNNDQVFKILDARVVSEGRKDDILSIANLAMRCLRLNRRKRPTMRVVSAELEALRMTQDSLEIAECSIEFQNDNDTTSSFETIQESTEESMSLFLQMDSTSI 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2307 672 Pfam LysM domain 186 228 IPR018392 -
Prci11g2307 672 ProSiteProfiles Protein kinase domain profile. 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2307 672 ProSiteProfiles LysM domain profile. 184 228 IPR018392 -
Prci11g2307 672 Pfam Protein kinase domain 352 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2307 672 FunFam Wall-associated receptor kinase 2 428 644 - -
Prci11g2307 672 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Prci11g2307 672 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 101 628 IPR045274 GO:0007166
Prci11g2307 672 SUPERFAMILY Protein kinase-like (PK-like) 334 621 IPR011009 -
Prci11g2307 672 Gene3D LysM domain 172 240 IPR036779 -
Prci11g2307 672 Gene3D Phosphorylase Kinase; domain 1 321 427 - -
Prci11g2307 672 CDD LysM 185 228 IPR018392 -
Prci11g2307 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Prci11g2307 672 Gene3D Transferase(Phosphotransferase) domain 1 428 646 - -
Prci11g2307 672 SMART serkin_6 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2307 672 CDD STKc_IRAK 358 624 - -
Prci11g2307 672 FunFam Wall-associated receptor kinase 2 322 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2307 Prci-Chr11 24205170 24207636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2307 267 625 Receptor kinase-like Gene Family AT1G16130 53.719 8.55e-130 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci11g2307 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2307 - - gmx:100795455 825.854