Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2306 ATGAAGCATCCTTATTCCTTTTACATTCTGCTCTCGTCTCTGCTTTCTCAATTACTCCATTGTTGCTGCCAACAAGAATACCTTAACAACACCATCTATGACTGCAGATCTTCCAACTTCACACTAAATGCCGGATATGAATGCGGCGGCCGACGAAGTTCTTGCGCCTCGTTCGCAACATTCAGATCAAGATCTCCTTACAACACCACTCTAAGCATTGCCAATCTTCTTGGCACCGATGAACTTTCCATAGTATCCATCAACAACATCTCAAGCAGTACCCACAACATTATTCCTTCCAATCAAGCCGTGATTGTTCCTATAAGTTGTCAATGTTCAGGCAATATCTACCAGGATGCCACTAGTTACACCATACAACCAAATGACACCTTCAGTAACATGGTCAGAAGCACTTTTCAAGGCCTTGCTAGTTGCCAGATGTTACTACGTCAAAATTATTACACCCCAGAAAATCTTGCTGTGGGTGCCCAGATTACAATTCCAGTGTTATGTGCTTGTCCCACTGATGAACAAATCTCAGATGGGGTCTCCCACTTGCTAGTTCACACCCTTGAACATGGGGATACAATACAGTCAGTCGCGGAGGCCTATGGTGTGAATCAACAGAGTCTGCTAGCTGCTAATGAGTTGCCTTCAAATGCCACTATCTATGCCTTCACCCCTATTTTAGTTCCCCTCAAACCCACTGCTTGCAAACTCAATCCACATTTATTTTACTGCACTTGTTCATTCTACCAGAGATACCGTCCAGAAAGTTTCAACACTCCTGATTGTGATTATCTTCAAAATGATGCCCATCGTTTCCCCGTAAAATTGGTTGCTTCCGTAGGTGTTGGTGCTGGTGCTGGTTTTTTAACCCTATTTATTTTGGGTTACAAGTTACATCAATGGCTGAAACAGAAGCGAGAAAGAGTTCGAAAGGAAAAACTGTTCAGGCAAAATGGTGGTCTCTTACTACAGGAAAAGATATCAAGTTACGGAAGAAGAGAGAAAGAAAAACATTTCACCGCAGAAGAGCTGGAAAAAGCAACAGATAACTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGGTTTGGAACTGTCTATAAAGGAATGTTACTAGATGGTAGCATTGTTGCAGTTAAGAAATCAAAAGAAATTGTGAGAAACCAGATTGAGACTTTCATTAATGAAGTGGTCATTTTATCCCAAATAAACCATAGGAACATCGTCAAACTTTTAGGTTGCTGTCTGGAGACTGAAGCCCCACTATTAGTTTATGAATTTATCCCGAACAGAACCCTTTCTCACCATATCCATAACCATGAACTTGAAAAATATCTTTCATGGGCAGCCCGCCTTAGAATTGCTTGTGAGGTTGCTGGGGCAGTGGCCTATATGCATTCTGCAGCTTCTATTCCCATCTTCCATAGAGACATCAAAACTTCTAACATACTCCTAGATCATAATTTCAATGTGAAAGTGTCTGATTTTGGCACTTCCAGATCAGTCCCGAATGATCAAACTCACTTAACCACAGTAGTACAAGGCACTTTTGGGTACATTGATCCTGAATACTTCCAATCTAGTCAATTCACAGATAAAAGTGATGTATATAGCTTTGGGGTTGTGCGTGTGGAGCTCATTACCGGAAGGAAACCCATTACCTTCTCAGAAGAAAATCAGGGTCAAAACCTTGTTGCAGAATTCATTTCTTTGATGAAGAAGGATCAAGTTTTTGAGATTTTAGATGCTAGAGTTGTTCGTGAAGGAAAGAAAGAAGATCTTCTTGGGATTGCAAATCTTGCATTGAGATGCTTGAAACTCAGGAAGAAGAGACCCACAATGAGAGAGGTTTCAACAGAGCTAGAGGCACTGAGGAAGACACAAAATACCTTAAAGATCACTGAATGTTCTCTTGAGTTTCCACACGATAGAAAATTGGCTAAGCATGCCACTCCTGAGTCTGACCAAGAATCCACAGAAGAAAGCATGCCATTGTTTTTCGAAACAGACTCAACAATGTCAACATCCATCCAAAAGTGA 2046 0.4115 MKHPYSFYILLSSLLSQLLHCCCQQEYLNNTIYDCRSSNFTLNAGYECGGRRSSCASFATFRSRSPYNTTLSIANLLGTDELSIVSINNISSSTHNIIPSNQAVIVPISCQCSGNIYQDATSYTIQPNDTFSNMVRSTFQGLASCQMLLRQNYYTPENLAVGAQITIPVLCACPTDEQISDGVSHLLVHTLEHGDTIQSVAEAYGVNQQSLLAANELPSNATIYAFTPILVPLKPTACKLNPHLFYCTCSFYQRYRPESFNTPDCDYLQNDAHRFPVKLVASVGVGAGAGFLTLFILGYKLHQWLKQKRERVRKEKLFRQNGGLLLQEKISSYGRREKEKHFTAEELEKATDNYNQSRFLGQGGFGTVYKGMLLDGSIVAVKKSKEIVRNQIETFINEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNRTLSHHIHNHELEKYLSWAARLRIACEVAGAVAYMHSAASIPIFHRDIKTSNILLDHNFNVKVSDFGTSRSVPNDQTHLTTVVQGTFGYIDPEYFQSSQFTDKSDVYSFGVVRVELITGRKPITFSEENQGQNLVAEFISLMKKDQVFEILDARVVREGKKEDLLGIANLALRCLKLNXKKRPTMREVSTELEALRKTQNTLKITECSLEFPHDRKLAKHATPESDQESTEESMPLFFETDSTMSTSIQK 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2306 682 Gene3D Transferase(Phosphotransferase) domain 1 430 644 - -
Prci11g2306 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Prci11g2306 682 FunFam Wall-associated receptor kinase 2 430 643 - -
Prci11g2306 682 MobiDBLite consensus disorder prediction 660 682 - -
Prci11g2306 682 CDD LysM 188 225 IPR018392 -
Prci11g2306 682 FunFam Wall-associated receptor kinase 2 325 429 - -
Prci11g2306 682 Pfam LysM domain 189 232 IPR018392 -
Prci11g2306 682 SUPERFAMILY LysM domain 187 232 IPR036779 -
Prci11g2306 682 Pfam Protein kinase domain 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2306 682 MobiDBLite consensus disorder prediction 647 682 - -
Prci11g2306 682 Gene3D LysM domain 177 239 IPR036779 -
Prci11g2306 682 SMART serkin_6 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2306 682 SUPERFAMILY Protein kinase-like (PK-like) 337 624 IPR011009 -
Prci11g2306 682 ProSiteProfiles LysM domain profile. 187 231 IPR018392 -
Prci11g2306 682 SMART LysM_2 188 232 IPR018392 -
Prci11g2306 682 SMART LysM_2 122 168 IPR018392 -
Prci11g2306 682 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Prci11g2306 682 ProSiteProfiles Protein kinase domain profile. 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2306 682 Gene3D Phosphorylase Kinase; domain 1 323 429 - -
Prci11g2306 682 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 632 IPR045274 GO:0007166
Prci11g2306 682 CDD STKc_IRAK 360 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2306 Prci-Chr11 24197871 24200830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2306 282 642 Receptor kinase-like Gene Family AT1G69730 56.044 5.33e-134 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci11g2306 Pkinase 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2306 - - vun:114186184 808.135