Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2305 ATGAAACTTGCTCCATTTTACATTCTTCTGCTCCTGTCTGTGCTTTCTCAATGTTGCTGCCAACAACAATACCTCAACTACACTATAGATGACTGTTCTTACAACGACACCTCAAGAGTAGGATATGTCTGTGGCCTCCAACCATGCACCTCCTTCGTAGCTTTCAGATCCCAACCTCCCTATAACACTCCTCTAAGCATTGCCAATCTTCTTGGCTCCCAAGCATCTTCTATAGCCTCCATCAACAACATCTCAAGCATTAACAACATTTCTTCCAATCAAAACGTGATTGTACCAATCTATTGTTCATGTTCCGGCAATATCTACCAGCATGCCGCTTCTTTCACCATTAGGAAAGGCGACACGATTTATGAAGTGGTCAGCTCTGTTTATCAAGGCCTAGCCAATTGCCAGATGACAGTACGTCAAAATTATTACGCCCCCACCAATCTCTCCATCGGAGACCAGATTACAGTCCCAGTATTATGTGCTTGTCCCACTGATAACCAGACCTCAGACGGGGTCTCATTCCTACTAGTTGATACCCTCAAGGATGGGGAATCGCCTGAGTCAGTTGCACAGGCCTTTGGTGTGGATGAACACAGTATGTTAACTGCTAATGAGTTGCCTTCAAACGCCACTATCACTGCCTTGAGCCCAATTATAGTTCCCCTCAATTCCTCCGCTTGCAAACTCAATCCACATGCATTCTACTGCACCTGTTCTTTCTCAGGAATACCTTCCAATTCCAGTTTCATCACTCTCTATTGTGCTCATCTTCAAAATGATGCTGATCGTTTCCCCATCAGATTGGTTGCTTCCTTAGGAGTTGGTACTGGTGCTGGTTTTTTATGCTTATTTCTTTTGGGTTACAAGTTATACCGATGCCTAAAACTAAAGCAAGAAAGAGTTCGTAAGGAAAAATTGTTCAGGAAAAACGGTGGCCACTTGCTACAAGAAAAGATGTCAAGTATTGAAAATAGAGAGAAAGCAACTTTTACCGCAGAAGAGCTCGAACGAGCAACAGATAACTACAATCGAAGTAGGTTTCTTGGTCAAGGTGGGTTTGGAACTGTTTATAAAGGAATGTTACCAGATGGCAGCATTGTCGCAGTTAAGAAGTCGAAAGAAATGGTGAGAAACCAGATTGAGACTTTCACTAACGAAGTAGCGATTCTATCCCAAATAAATCACAGGAACATTGTCAAACTCTTCGGTTGGTGCCTAGAGACTGAAGCCCCATTATTAGTATATGAATATATTCCCAATGGTACCCTTTCTCACCACATCCATAACCAGGAACTTGAATCACATCTTTCATGGGATGCCCGCCTTAGAATTGCTAGTGAGGTTGCTGGGGCCGTGGCCTATATGCATTCCTCAGCTTCCATTCCCATCTTCCATAGAGACATCAAAACTTCCAACATACTCCTAGATCATAAGTACAGTGCCAAAGTATCTGATTTTGGGACTTCCAGATCAGTCCCAAACGATAGGACTCACTTAACCACAGTGGTACAAGGCACTTTTGGGTATGATCCCGAATACTTCCAATCCAGTCAATTCACAGATAAAAGTGATGTATATAGCTTTGGGGTTGTGCTTGTGGAGCTCATTTGTGGAAGGAAACCCATTACCTTCTCAGAAGAAGACCAAGGTCAAAACCTTGTTGCAGAATTCATTTCTTTGATGAAGAAGGGCCAGGTTTTTGAGATTGTAGATGCTAGAGTTGTACATGAAGGAAGGAAAGATGATATTCTTAGCATTGCAAATCTTGCAAAGAGATGCTTGAGACTGAATGGGAAGAAGAGACCCACAATGAGAGAGGTTTCAGCAGAGCTAGAAGCATTGAGAAAGACACAGAATACCTTAAAGATTACTGAATGTTCTCTTGAGTTTCCACATGATAGAAATTCGACTAAGCAAGCCACTCCTGAATCAGACCAAGAATCCATAGAAGAAAGCACACCATTGGTTTTCCAAATAGACTCTATATCCATCTAA 2004 0.4232 MKLAPFYILLLLSVLSQCCCQQQYLNYTIDDCSYNDTSRVGYVCGLQPCTSFVAFRSQPPYNTPLSIANLLGSQASSIASINNISSINNISSNQNVIVPIYCSCSGNIYQHAASFTIRKGDTIYEVVSSVYQGLANCQMTVRQNYYAPTNLSIGDQITVPVLCACPTDNQTSDGVSFLLVDTLKDGESPESVAQAFGVDEHSMLTANELPSNATITALSPIIVPLNSSACKLNPHAFYCTCSFSGIPSNSSFITLYCAHLQNDADRFPIRLVASLGVGTGAGFLCLFLLGYKLYRCLKLKQERVRKEKLFRKNGGHLLQEKMSSIENREKAKXFTAEELERATDNYNRSRFLGQGGFGTVYKGMLPDGSIVAVKKSKEMVRNQIETFTNEVAILSQINHRNIVKLFGWCLETEAPLLVYEYIPNGTLSHHIHNQELESHLSWDARLRIASEVAGAVAYMHSSASIPIFHRDIKTSNILLDHKYSAKVSDFGTSRSVPNDRTHLTTVVQGTFGYXDPEYFQSSQFTDKSDVYSFGVVLVELICGRKPITFSEEDQGQNLVAEFISLMKKGQVFEIVDARVVHEGRKDDILSIANLAKRCLRLNGKKRPTMREVSAELEALRKTQNTLKITECSLEFPHDRNSTKQATPESDQESIEESTPLVFQIDSISI 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2305 669 Coils Coil 667 669 - -
Prci11g2305 669 SUPERFAMILY Protein kinase-like (PK-like) 326 616 IPR011009 -
Prci11g2305 669 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 624 IPR045274 GO:0007166
Prci11g2305 669 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Prci11g2305 669 Gene3D Transferase(Phosphotransferase) domain 1 422 641 - -
Prci11g2305 669 Gene3D Phosphorylase Kinase; domain 1 310 421 - -
Prci11g2305 669 ProSiteProfiles Protein kinase domain profile. 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2305 669 CDD STKc_IRAK 352 619 - -
Prci11g2305 669 Coils Coil 334 345 - -
Prci11g2305 669 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2305 669 FunFam Wall-associated receptor kinase 2 317 421 - -
Prci11g2305 669 Coils Coil 325 332 - -
Prci11g2305 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Prci11g2305 669 SMART serkin_6 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2305 669 FunFam Wall-associated receptor kinase 2 422 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2305 Prci-Chr11 24190146 24193163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2305 276 623 Receptor kinase-like Gene Family AT1G16130 56.000 3.65e-133 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci11g2305 Pkinase 2.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2305 - - vun:114186184 803.512