Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2304 ATGAAGATTCTTTCATTCTACGTTCTGCTCCTGTCTGTGCTTTCTCAATCCCTCCATTGCTGCAGCCAACAGGACCTCAAAGATATCGTTGACTGCTCTTTCAATTCCACAAACAAAGTAGCGTATGACTGCAATGGCCTCCAAAAGTCATGCATCTCCTTCGTAACTTTCAGATCCAATCCTCTTTATGATACCCCTCTTAACATTGCCAATCATCTTAGCTCCCAAGCAGCTTCCATAGCCTCCATCAACAACATCTCCAGCAATAACAACAACATTCCCATCGATCAACTTGTTATTGTTCCCATCGATTGTTCCTGTTTGGGTGGAATCTACCAGCATCCCACTTCTTATACCTTGAAGGCAGTTGACACCTACTTTACTGTGGCCAACAACACTTATCAAGGCCTTGCCATTTGCCAGATGTTGCTTCGACAAAATTATGTCATCGATCCCACTGCAGGCAAACAGGTTTCAGTTCCAATCTCATGTGCTTGTCCCACTGCTAACCAGATCTCAGATGGGGTCTCCTTCCTGCTACTTCACACAGTTGTATTTGGGGATTCAATTGAGTCAATCGCAAAGGCCTATGGTGCAGATCAACAGACTCTGCTAACCGCTAATAAGTTGCATCTAAATGATCTCATCTATCCCTTCACAACTTTTTTAGTTCCCATCAAACCTTCTTCCTGTAAACTTAATCCGCATTTATTCTACTGCACCTGCTCATTCTCTCAGAAATACCTTCCGAGTTCAAGTTTCAACACTCTCGATTGTGATCATCTTCAAAAAGATGCTCGTCGTTTCCCCATCAAATTGGTTGCTTCTTTAGGTGCTGGTATTGGTGCCGGACTTTTGTGCTTATTTCTTTTGAGTCACAAGTTACATCAATGCCTAAAACAAAAGAAAGAAAGAATCCGTCGGGAAAAGTTGTTCAAGCAAAATGGTGGCCTCTTGCTACAAGAAAAGATATCATGTTATGGAAACCGAGAGAAAGCAAAACTTTTTACAGTGGATGAGCTGGAACGAGCAACAGATAACTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGATTTGGAACCGTTTATAAAGGAATGTTACAAGATGGTAGCATTGTCGCAGTCAAGAAGGCAAAAGAAATTGTGAGAAACCAGATTGAGACTTTGATTAACGAAGTGGTGATTCTGTCCCAAATAAACCATAGGAACATTGTCCAACTCCTAGGTTGGTGTCTAGAGACTGAAGCCCCATTACTGGTATATGAATTTATTCCCAATGGAACCCTTTCTCATCACATCCATAACCAGGAACTCGAAGCAAAGCTTTCATGGGACAACCGTCTCAGAATTGCTTGTGAGGTTGCAGGAGCACTGGCCTATATGCATTCTGCAGCTTCCATTCCCATCTTCCATAGAGACGTCAAAACTTCAAACATACTCCTGGATCATAAGTATAGTGCCAAAGTGTCTGATTTTGGGACTTCAAGATCAGTCCCAGATGATAGGACTCACTTAACCACAGTGGTACAAGGCACTTTTGGGTACATTGATCCTGAATACTTCCAATCTAGTCAATTTACAGAAAAAAGCGATGTATACAGTTTTGGGGTTGTACTTGTAGAGCTCATCACTGGAAGGAAACCCATTACCTTCTCAGAAGAAAATCAGGGTCAAAACCTAGTTGCAGAATTTATGTCTCTGACAAAGAAGGATAAGGTTTTTGAGATTTTAGATGCTAAAGTTGTTCATGAAGGAAGGAAAGATGATCTTCTTGGGATTGCAAATCTTGCAAAGAGATGCTTGAGACTGAATGGGAAGAAGAGACCCACAATGAGAGAGGTTTCAGCAGAGCTAGAAGCATTGAGAAAGACACAAAATAACATAAAGATCACTGAATGTGCTCTTGAATTTCCACATGACAGACAATCTGCTAACCACGCCACTCCTTCTGAATCAGACCAAGATTCCACAGAAGAAAACATATTATTTTTCCAAATAGACTCTACACCCAGCTAA 2016 0.4137 MKILSFYVLLLSVLSQSLHCCSQQDLKDIVDCSFNSTNKVAYDCNGLQKSCISFVTFRSNPLYDTPLNIANHLSSQAASIASINNISSNNNNIPIDQLVIVPIDCSCLGGIYQHPTSYTLKAVDTYFTVANNTYQGLAICQMLLRQNYVIDPTAGKQVSVPISCACPTANQISDGVSFLLLHTVVFGDSIESIAKAYGADQQTLLTANKLHLNDLIYPFTTFLVPIKPSSCKLNPHLFYCTCSFSQKYLPSSSFNTLDCDHLQKDARRFPIKLVASLGAGIGAGLLCLFLLSHKLHQCLKQKKERIRREKLFKQNGGLLLQEKISCYGNREKAKLFTVDELERATDNYNQSRFLGQGGFGTVYKGMLQDGSIVAVKKAKEIVRNQIETLINEVVILSQINHRNIVQLLGWCLETEAPLLVYEFIPNGTLSHHIHNQELEAKLSWDNRLRIACEVAGALAYMHSAASIPIFHRDVKTSNILLDHKYSAKVSDFGTSRSVPDDRTHLTTVVQGTFGYIDPEYFQSSQFTEKSDVYSFGVVLVELITGRKPITFSEENQGQNLVAEFMSLTKKDKVFEILDAKVVHEGRKDDLLGIANLAKRCLRLNGKKRPTMREVSAELEALRKTQNNIKITECALEFPHDRQSANHATPSESDQDSTEENILFFQIDSTPS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2304 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Prci11g2304 671 Pfam LysM domain 182 225 IPR018392 -
Prci11g2304 671 MobiDBLite consensus disorder prediction 643 658 - -
Prci11g2304 671 SMART serkin_6 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2304 671 ProSiteProfiles LysM domain profile. 180 224 IPR018392 -
Prci11g2304 671 SUPERFAMILY LysM domain 180 225 IPR036779 -
Prci11g2304 671 MobiDBLite consensus disorder prediction 639 658 - -
Prci11g2304 671 SMART LysM_2 181 225 IPR018392 -
Prci11g2304 671 CDD LysM 182 218 IPR018392 -
Prci11g2304 671 Pfam Protein kinase domain 348 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2304 671 SUPERFAMILY Protein kinase-like (PK-like) 332 618 IPR011009 -
Prci11g2304 671 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Prci11g2304 671 CDD STKc_IRAK 354 621 - -
Prci11g2304 671 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 92 626 IPR045274 GO:0007166
Prci11g2304 671 Gene3D LysM domain 181 234 IPR036779 -
Prci11g2304 671 FunFam Wall-associated receptor kinase 2 424 637 - -
Prci11g2304 671 ProSiteProfiles Protein kinase domain profile. 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2304 671 FunFam Wall-associated receptor kinase 2 319 423 - -
Prci11g2304 671 Gene3D Transferase(Phosphotransferase) domain 1 424 641 - -
Prci11g2304 671 Gene3D Phosphorylase Kinase; domain 1 321 423 - -
Prci11g2304 671 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2304 Prci-Chr11 24132093 24134795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2304 278 625 Receptor kinase-like Gene Family AT1G16130 56.695 6.45e-134 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci11g2304 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2304 - - vun:114186184 735.717