Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2300 ATGAACAGGAGTCTCTTGGCCTTAATAGTAGGGACTTGTGTAGGCTTTGTCTTTGGAGTGGGTGTGGCAATTTCATTTGTGTGCTGCTTCTGGTGCCAAAATAAGCATACACGGGCAAAGAGAAGCTCCCAGCAAGCAGGAAACATTCCTGTTCGTGTCAAGGTAGTTGATCATGGCAGATCATTGTCAAGCTCAAATGTGGAGCTGGAGTCAGCCGTATCATCTGACTGGAGTGACATGCCTCTTTGGTTGGAAGGACTTAAGAGGAAGGATGTTGGTTCTGCATGCGGAATTCCAAAATATTCTTACAGATACATGCAGAAGGCAACTTCTAATTTCACAACCATCATAGGTCGTGGAGCATTTGGTTCCGTTTACAAAGCTCAGATGCTCACTGGTGAAACAGTTGCTGTTAAAGTTCTTGGTAATAATTCAAGACATGGAGAGAAGGAGTTTTTGACTGAGGTCTTGTTACTTGGAAGGTTACATCACAAACACCTGGTGGATTTGGTGGGGTATACTGCAGAAAGAGGACAGCATATGCTCCTTTATGCTTATATGAGCAATGGCAACCTCGCCTCTCACTTATATGGTTTAGGCAAAAATCAGGAGGCATTAGATTGGGATGCAAGACTTCGGATAGCACTAGATGTTGCAAGGGCACTTGAATATCTGCATTATGGGGCTTCTCCACCTGTTGTGCACCGTGACATTAAATCTTCCAACACACTGCTGGACCAGTTTATGAGAGCCAAGGTAACTGACTTTGGGCTTTCGAGACCAGAGATGATTAAAACCCGTTCATCTAATGTCAAAGGAACTTTTGGCTATCTTGATCCTGAATACGTGTCAACAAAAACTTTTACCAAGAAAAGTGATGTTTATAGTTTTGGTGTGCTACTCTTTGAATTGATTACTGGCAGGAATCCACAGCAGGGCATGATGGAATATGTGAAACTAGCAGCCATGGAAGCCGAGAGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAGCTTAATGGAAAATATGATGTGCCTAGGCTTAATGATATGGCTTGTCTTGCTTTGAAATGTGTCAGTGAAGCATCCAGAGACCGACCTTCCATGAGGGACATTGCTGGATCATTATCTCAGCTCTATAAGAAGCAGCATTATTGTAGAGATGATAATACACAGTCTCCTGCTGCAGTAAATGAAGTTTCCATTGAAGTGGAACGTCTAAAAATCCAGGAATTTTCATCCACAGAGCGCTCAATCTTGTTGCACAGATTGCATAGCCGATGA 1284 0.4299 MNRSLLALIVGTCVGFVFGVGVAISFVCCFWCQNKHTRAKRSSQQAGNIPVRVKVVDHGRSLSSSNVELESAVSSDWSDMPLWLEGLKRKDVGSACGIPKYSYRYMQKATSNFTTIIGRGAFGSVYKAQMLTGETVAVKVLGNNSRHGEKEFLTEVLLLGRLHHKHLVDLVGYTAERGQHMLLYAYMSNGNLASHLYGLGKNQEALDWDARLRIALDVARALEYLHYGASPPVVHRDIKSSNTLLDQFMRAKVTDFGLSRPEMIKTRSSNVKGTFGYLDPEYVSTKTFTKKSDVYSFGVLLFELITGRNPQQGMMEYVKLAAMEAESKVGWEEIVDSQLNGKYDVPRLNDMACLALKCVSEASRDRPSMRDIAGSLSQLYKKQHYCRDDNTQSPAAVNEVSIEVERLKIQEFSSTERSILLHRLHSR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2300 427 PANTHER OS01G0750732 PROTEIN 22 390 - -
Prci11g2300 427 ProSiteProfiles Protein kinase domain profile. 111 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2300 427 SMART serkin_6 111 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2300 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Prci11g2300 427 Pfam Protein tyrosine and serine/threonine kinase 113 374 IPR001245 GO:0004672|GO:0006468
Prci11g2300 427 Gene3D Phosphorylase Kinase; domain 1 95 186 - -
Prci11g2300 427 SUPERFAMILY Protein kinase-like (PK-like) 97 375 IPR011009 -
Prci11g2300 427 CDD STKc_IRAK 117 379 - -
Prci11g2300 427 ProSitePatterns Protein kinases ATP-binding region signature. 117 139 IPR017441 GO:0005524
Prci11g2300 427 Gene3D Transferase(Phosphotransferase) domain 1 187 403 - -
Prci11g2300 427 FunFam calcium/calmodulin-regulated receptor-like kinase 1 187 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2300 Prci-Chr11 24109722 24117609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2300 90 403 Glycoside Hydrolase AT3G07070 41.791 1.80e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Prci11g2300 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2300 - - gmx:100816549 548.895