Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2276 ATGTTCGCCGGAGAAATTTCCGGGCAATGTCCCTCACCCATGATTGTGTTTTCTCTGTTTTTTCTCTGCCTGGCTGTGGCTGGTTCGTCCCTGTCGGATGAGTTTCAAATGCTCATGAAGTTCAAGTCCTCTGTTCAAACTTCAAATGCCGATGATGTTTTCAGTTCCTGGACGGACGTCAAATCTCCTTGCAAGTTCTCTGGGATTGTCTGCAATTCCAATGGCTTCGTCTCAGAAATCAATCTCGCCGGAAAAAATCTTGTGGGTACTATCGGATTTGATTCACTGTGCGAACTTCAGTCGTTAGAGAGAATATCTCTGGAGTTGAACTCCTTTCATGGAAGGATCAGTGAAGACCTGAGCAAGTGCAGTAATTTGAAGTATTTGGATTTGGGCGGGAATTCGTTTTCTGGGGTAATGCCTGATTTCTCTAATTTGAACAAGCTCCAGTACTTGAACTTGAATGCTAGTGGAATTTCTGGGTTATTTCCATGGAAATCATTGGAAAATCTAACTAGTCTTGAATTCTTAAGCCTTGGCGATAACACATTTGAAAGAAGTCCTTTTCCTATGGAGGTGTTAAAGCTTGATAAATTGTATTGGCTTTACCTCACAAATTGCAGTATCACTGGGAAAATCCCGTTGGGTATTGGGAATCTGACGCAGCTTGAGAATTTTGAGCTTTCTGATAATCTTTTGACAGGTGAAATCCCAGGTGATATTGGAAAGCTTCAGAAGCTGAGACAACTTGAGATGTATGACAACTACTTGATTGGGAAAATCCCAATAGGATTTGGTAACCTCACCAGTCTTGTCTCCTTGGATTTTTCTAATAATCAGCTTGAAGGTGATATTTCTGAGCTACGGTTCTTGAGAAACTTAGCTTCTCTTCAGCTTTTTCAGAATCAATTCTCTGGAGGAATTCCAAATGAGTTTGGAGATTTCAAAAGCCTCACTGAATTGTCTCTTTATGCAAATAATTTCTCTGGTCCTCTCCCTCAAAAGCTTGGATCATGGGCTGGATTACAATATATTGATGTTTCTGATAACTCTCTCTCTGGTCCTATACCCCCTGACATGTGCAGGAACAACATGACCGAGCTAGCTATGTTAAACAATAGCTTCACTGGAAGTATACCAGAATCATACGCGAATTGTACGGCTATGGTTCGTTTTCTTGTTAACAGAAACTTGCTTTCTGGTCGTGTTCCTTCAGGTTTATGGGGCCTGCCAAATATGGAAATAATTGATCTTTCAACTAACCGTTTTGAAGGTCCAGTGACATCTGATATTGCTGAAGCAAAATCTCTTGCACAACTGTTTTTATCTGACAATAAGTTCTCAGGTGAGCTACCCTTGGGAATCTCAGAAGCTTCTTCATTGGTATCAATTAAGCTGAGTTCAAATGAATTCTCTGGTAAAATTCCAGATACTATAGGAAACTTGAAGAAATTGGGTAGCCTTAAGTTGGATGGAAACAATTTTTCTGGCTCTATACCAGAGTCTTTAAGTTCATGTATTTCCCTTAGTGAAATAAACATTGCTGGTAACTCACTTTCTGGGGGAATCCCTACAAGTCTTGGCTCTCTGCCTACTCTCAATTCATTGAACTTGTCATCTAATGGACTTTCTGGTGAAATTCCATTGAGCTTGTCATATCTTAAACTGAGCCTTCTTGATTTATCAAACAACAACTTTTTTGGTCCGGTACCAGATTCACTCTCTATTCCAGCATTTACAGATGGGTTAAAGGGGAATCCTGGCTTATGCAGTGAGACTTTGGAAAATTTTAGGCCATGTTCATTGGATAGCACTGGTTCTAGTCGAATTAGGACCATTATACTCTGTTTGATTGCTGGTGTTATGGCTTTACTCGTTTCATTGGCATGTTTATTCTTCCTGAAACTAAAGCAGAACAAGTTTGAGAAGAAGCCTTTGAAGACTAATTCCTGGGATTTGAAGCAGTACCATGTGATAAACTTCAATGAAAATGAAATCATTGAAGGGATCAAGGCAGAGAATCTGATTGGCAAAGGAGGGTCCGGGAACGTTTACAAGGTTGTTCTCAAATGTGGCAAAGAATTGGCAGTCAAACACATATGGACTTCAAATCTGGGTGAACCAGGAAGTGGCCGTAGCAGTTCAGCAATGCTGAAAAGGACTCGCCGGTCCACGGAATATGATGCAGAGGTGGCCACACTGAGCTCCATAAGGCATGTAAACGTTGTGAAGCTCTATTGTAGCATCACAAGTGAAGATAGTAGCCTTCTTGTTTATGAGTTCTTGCCAAATGGGAGCTTGTGGGATAGGCTGCACAATTGCAAGAAAACTCATATGGGTTGGGAGGTTAGGTATGAAATTGCATTGGGAGCTGCTAGAGGATTGGAGTATTTGCATCATGGGTGTGATAGGCCAGTTATACATAGAGATGTGAAATCAAGTAACATCTTAATTGATCGGGAATGGAAGTCAAGGATTGCTGACTTTGGGCTTGCCAAGATTGTTCAAGGAGCGGGAGGCAATTGGACAAATGTTATTGCTGGAACACTTGGATACATGGCTCCTGAGTATGCCTACACTTGTAAGGTGACTGAGAAGAGTGATGTGTACAGCTTCGGAGTAGTTCTAATGGAGTTAGTGACGGGGAAGAAGCCAAATGAGCCAGAGTTCGGGGAGAACAAGGACATAGTCCATTGGGTATGTGGCAACAAGAGGACCAATGAAGACATGGTTGAACTTGTGGATCCCGCAATTCCAACGTATTTCAAAGATGATGCAATCAAGGTTCTGAGAATTGCAACACTCTGCACTGTGAAGGTTCCATACTCAAGACCTTCCATGAGAACGGTGGTTCAGATGCTGGAAGAGGCAGCACCTTGTACTCTGACGGATGTTGTTGTGACTAAAGATGGTTAA 2916 0.4167 MFAGEISGQCPSPMIVFSLFFLCLAVAGSSLSDEFQMLMKFKSSVQTSNADDVFSSWTDVKSPCKFSGIVCNSNGFVSEINLAGKNLVGTIGFDSLCELQSLERISLELNSFHGRISEDLSKCSNLKYLDLGGNSFSGVMPDFSNLNKLQYLNLNASGISGLFPWKSLENLTSLEFLSLGDNTFERSPFPMEVLKLDKLYWLYLTNCSITGKIPLGIGNLTQLENFELSDNLLTGEIPGDIGKLQKLRQLEMYDNYLIGKIPIGFGNLTSLVSLDFSNNQLEGDISELRFLRNLASLQLFQNQFSGGIPNEFGDFKSLTELSLYANNFSGPLPQKLGSWAGLQYIDVSDNSLSGPIPPDMCRNNMTELAMLNNSFTGSIPESYANCTAMVRFLVNRNLLSGRVPSGLWGLPNMEIIDLSTNRFEGPVTSDIAEAKSLAQLFLSDNKFSGELPLGISEASSLVSIKLSSNEFSGKIPDTIGNLKKLGSLKLDGNNFSGSIPESLSSCISLSEINIAGNSLSGGIPTSLGSLPTLNSLNLSSNGLSGEIPLSLSYLKLSLLDLSNNNFFGPVPDSLSIPAFTDGLKGNPGLCSETLENFRPCSLDSTGSSRIRTIILCLIAGVMALLVSLACLFFLKLKQNKFEKKPLKTNSWDLKQYHVINFNENEIIEGIKAENLIGKGGSGNVYKVVLKCGKELAVKHIWTSNLGEPGSGRSSSAMLKRTRRSTEYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDRLHNCKKTHMGWEVRYEIALGAARGLEYLHHGCDRPVIHRDVKSSNILIDREWKSRIADFGLAKIVQGAGGNWTNVIAGTLGYMAPEYAYTCKVTEKSDVYSFGVVLMELVTGKKPNEPEFGENKDIVHWVCGNKRTNEDMVELVDPAIPTYFKDDAIKVLRIATLCTVKVPYSRPSMRTVVQMLEEAAPCTLTDVVVTKDG 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2276 971 FunFam Probable inactive receptor kinase RLK902 31 190 - -
Prci11g2276 971 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 954 - -
Prci11g2276 971 Gene3D Transferase(Phosphotransferase) domain 1 762 964 - -
Prci11g2276 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Prci11g2276 971 ProSiteProfiles Protein kinase domain profile. 670 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2276 971 SUPERFAMILY L domain-like 286 517 - -
Prci11g2276 971 Pfam Protein kinase domain 673 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2276 971 ProSiteProfiles Leucine-rich repeat profile. 270 292 IPR001611 GO:0005515
Prci11g2276 971 FunFam Leucine-rich repeat receptor-like protein kinase TDR 288 602 - -
Prci11g2276 971 Gene3D Ribonuclease Inhibitor 361 608 IPR032675 -
Prci11g2276 971 SUPERFAMILY L domain-like 71 372 - -
Prci11g2276 971 Gene3D Ribonuclease Inhibitor 142 360 IPR032675 -
Prci11g2276 971 Gene3D Phosphorylase Kinase; domain 1 654 761 - -
Prci11g2276 971 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
Prci11g2276 971 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Prci11g2276 971 SUPERFAMILY Protein kinase-like (PK-like) 662 955 IPR011009 -
Prci11g2276 971 SMART serkin_6 670 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2276 971 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 762 969 - -
Prci11g2276 971 Gene3D Ribonuclease Inhibitor 33 141 IPR032675 -
Prci11g2276 971 FunFam Receptor-like protein kinase HAIKU2 653 761 - -
Prci11g2276 971 FunFam Leucine-rich receptor-like protein kinase family protein 191 287 - -
Prci11g2276 971 SUPERFAMILY L domain-like 498 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2276 Prci-Chr11 23578393 23582178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2276 12 970 Receptor kinase-like Gene Family AT1G09970 57.379 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci11g2276 Pkinase 4.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2276 - - gmx:100811489 1357.43