Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2261 ATGTCCACTCTCAATGTTGCACGATGCTACTATGATGTGAAGGATCGACCTGAATATCCTCATCTCTTTCAAGATGTATCAACTCAATACCACAACACTACAATGCAAAATTTTAACCTCAATCTTTGTGTGAATTTCATACAACGTTGTTCAGAAGGCACTTGTCATATAATCAGTCATCCACTAGTTTCTTCCCATGTAATTTCATGCAGCCAGTTTTTCCAGAATGGTTCGAGATTTTTACGTCGTAATATTTATCATCACTTTCTCGATCTTCAAGTACTTGATGGATTGTTTCCCAACGTCATTCATCTTGCTCGACAATGGTTCAACAATGATCAACCTTGTCCTTCTATTTTTGAAGATGGTTTCATTGCTTATCCTCTGGCTATTGATATTATTGTTGAATTTCGTGAGAATGTCGAAGTCATTCATGGTCTGGATCTGGATCATATGGCTGGAGTTAGAATGATTCCGACATGTGAAGAAGCAATTCAATCGCTCAACAAAACAAAGTTTGAAGAAGACAGTGTTAAGAAGAATCAGTGTTCTATTTGTCTGGAATATTTTTGTGATGGTGTTGAGGTTTCGATGATGCCATGTCACCATGTTTTTCATCATACTTGTATCGTTCGGTGGCTGAAAACTAGTCATCTATGTCCTTTATGTCGATATTCTATGCCTGTGGGCAATAATTCTTAG 702 0.3732 MSTLNVARCYYDVKDRPEYPHLFQDVSTQYHNTTMQNFNLNLCVNFIQRCSEGTCHIISHPLVSSHVISCSQFFQNGSRFLRRNIYHHFLDLQVLDGLFPNVIHLARQWFNNDQPCPSIFEDGFIAYPLAIDIIVEFRENVEVIHGLDLDHMAGVRMIPTCEEAIQSLNKTKFEEDSVKKNQCSICLEYFCDGVEVSMMPCHHVFHHTCIVRWLKTSHLCPLCRYSMPVGNNS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2261 233 Pfam Ring finger domain 181 224 IPR001841 -
Prci11g2261 233 CDD RING-H2_PA-TM-RING 182 224 - -
Prci11g2261 233 SUPERFAMILY RING/U-box 164 228 - -
Prci11g2261 233 SMART ring_2 183 223 IPR001841 -
Prci11g2261 233 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 89 228 - -
Prci11g2261 233 ProSiteProfiles Zinc finger RING-type profile. 183 224 IPR001841 -
Prci11g2261 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 230 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2261 Prci-Chr11 23359079 23359780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2261 149 228 C3H Transcription Factor Family AT1G18760 33.750 1.86e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2261 - - pcin:129286350 501.901