Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2238 ATGGGTGCACAACTTTCTGGTTTGGGCATTAACGAACTGCAAAATTTGGAAAATCAACTGGAGATGAGTTTAAAGGGTGTCCGAATAAAAAAGAATCAAATATTAACTGATGAGATTAAAGAGCTGCAGCAAAAGGGAAATCAAATCCGTCAAGAAAATGTACAACTCCATAAAAGGATAGACCTCGTTACCAAAGAAAATGTAGAACTACAAAAGATTCATGAAGCGAGGATTATGAATGAAGAAAATGGGAATTCCGATCAATCATACAATATCAGTAACACATATGGTTTACAAGCACCAAACCTTCTGCAGTTGAACCAGCCACGACCTCAGTATACTGAACTCGGATTACAGCTTCTCTAG 366 0.3743 MGAQLSGLGINELQNLENQLEMSLKGVRIKKNQILTDEIKELQQKGNQIRQENVQLHKRIDLVTKENVELQKIHEARIMNEENGNSDQSYNISNTYGLQAPNLLQLNQPRPQYTELGLQLL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2238 121 ProSiteProfiles K-box domain profile. 1 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
Prci11g2238 121 Coils Coil 32 59 - -
Prci11g2238 121 Coils Coil 10 30 - -
Prci11g2238 121 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2238 Prci-Chr11 22854705 22859090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2238 1 120 MADS-box Gene Family AT2G14210 45.600 3.53e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2238 K09264 - gmx:100805092 142.124