Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2223 ATGAGATTTTTCTTCTCTCTCCCATATGAACGCCAGAACAGAGGAAGAGTAAGGGAGCGTCCGAAAATCATCGCAGTCTTCTTCTTCTTCTTCTCGGTCTCGGTTCCTTGTTCCTTGCCGTCGGTCTATGTGGTTCCTCGCTTCCACCCTCCTCTTCGCCTTCGTTTGTCCGCTGTAGTGGGTAGGTCGCCGGATTTTCTTCCCCTGTCATCGCCCTCTACTCCTTCCCTGCAACTTCAAGATTCAGATGCCTTATTTTTTGATTACCCCTGCATCAAGGGAGATGGTCTTAAGCTGGAAGGAGATGTTTCAAACAATAATCCACATTCATTTATCCATTTAGGTGGAACGAGATGGGGTCAGGTTAAAAAGAATATTTACAGTCCTGGACGAGTCACAAGTAACCGAATGAAGCAACTCTGGGACAAGACCTCAAGAAAACTTTTTGACTTCCACGCAAAGTTTTCTTTTTCCTTTATGAGGGTTCCTACAGATGGATTTGCATTCTTCCTAGCAGATCCAGATCTTCCATTTTCAGAGAACATTGAGGAAGGAGGTGGTCTGGGTCTTGTGGATGGGAACCAAATACTGAAGTCAACTCAACATCCTTTGTTGCAGTGGAGGAAAGGAAAGATTGGACTCTTCGTAGGGATGGGTGTTGGTATAGCTGCGGTTATGGCGGCTGTACTACTTCTCAATATTGAAGGGCAAGAAAGCCCAAATGGTCCAAAGAATTTTTGCCATGATGAATTGGTGACGGCAACAAACAACTTTGCAAAGGCACAGAAACTTGGGCATGGTGCTTCTGGTGATGTTTATAAGGGTTTCTTGAAAGACTTGGACTCTGATGTTGCTATAAAGAGGATATCAAGAAGTTCTAGACATGGGATAAAGGAATATACAGCAGAAGTGAAGATCATTAGCCAACTGAGACACAGGAATCTAGTACCGCTAATTGGTTGGTGCCACGAGAAGAAAGATCTTCTCCTTATATACAAGTTCATGCCAAATGGTAGCTTAGATTCACATCTACACCATAGAAACAGCTTCTTGACTTGGAAGATGACGTATGACATTTCTCTAGCCTTGGCTTGGGCTTTACTCTACCTGCATGAAGAATGGGATCAGTGTGTCCTTCACAGAGACTTTAAAGCCAGCAACATTATGTTAGACTCAAACTTCAATGCCAAACTTGGTGATTTCGGGTTAGCGAGGCTAGTGGATCACAAAAAGGGGTCACAAACCACGGTTATAGCCGGAACGAGGGGCTACATCGCTCCGGAGTATTTCATTACAAGCAAGGCTACTAAGCAAACTGATATATATAGCTTTGGGGTGGTTCTGTTGGAGATTGCAAGTGGAAGAAAACTCATTGACCTAAGCAACGAGGCTGAAACAACCATAGTTGATTGGGTTTGGCAACTGAACGGACTGGGAAAGATGCTTGAAGTAGCTGATCTAAAGCTAAGTGGAACATTTGATGAGTATCAAATGGAACGTTTAGTGGTTGTTGGCATGTGGTGTGCTCATCCAGATCAGTCTTGCAGGCCCTCCTCTATAACGCAAGTGATCCAAGTTCTCAAATTGGAAGCTCCTTTACCATCTCTCCCTAGAGAAATGCCTGTGCCAACTTACCATCCTCCAACAATAATAAATACTTGTCTTGAGATTTCAAACTATAATGATCTAGGTGTAAATTAG 1701 0.4356 MRFFFSLPYERQNRGRVRERPKIIAVFFFFFSVSVPCSLPSVYVVPRFHPPLRLRLSAVVGRSPDFLPLSSPSTPSLQLQDSDALFFDYPCIKGDGLKLEGDVSNNNPHSFIHLGGTRWGQVKKNIYSPGRVTSNRMKQLWDKTSRKLFDFHAKFSFSFMRVPTDGFAFFLADPDLPFSENIEEGGGLGLVDGNQILKSTQHPLLQWRKGKIGLFVGMGVGIAAVMAAVLLLNIEGQESPNGPKNFCHDELVTATNNFAKAQKLGHGASGDVYKGFLKDLDSDVAIKRISRSSRHGIKEYTAEVKIISQLRHRNLVPLIGWCHEKKDLLLIYKFMPNGSLDSHLHHRNSFLTWKMTYDISLALAWALLYLHEEWDQCVLHRDFKASNIMLDSNFNAKLGDFGLARLVDHKKGSQTTVIAGTRGYIAPEYFITSKATKQTDIYSFGVVLLEIASGRKLIDLSNEAETTIVDWVWQLNGLGKMLEVADLKLSGTFDEYQMERLVVVGMWCAHPDQSCRPSSITQVIQVLKLEAPLPSLPREMPVPTYHPPTIINTCLEISNYNDLGVN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2223 566 FunFam Lectin-domain containing receptor kinase A4.3 335 547 - -
Prci11g2223 566 Pfam Protein kinase domain 259 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2223 566 Pfam Legume lectin domain 88 200 IPR001220 GO:0030246
Prci11g2223 566 SUPERFAMILY Protein kinase-like (PK-like) 241 546 IPR011009 -
Prci11g2223 566 SUPERFAMILY Concanavalin A-like lectins/glucanases 86 195 IPR013320 -
Prci11g2223 566 Gene3D Phosphorylase Kinase; domain 1 243 334 - -
Prci11g2223 566 PANTHER - 225 531 - -
Prci11g2223 566 Gene3D - 83 204 - -
Prci11g2223 566 FunFam L-type lectin-domain containing receptor kinase IX.1 243 334 - -
Prci11g2223 566 ProSitePatterns Protein kinases ATP-binding region signature. 264 287 IPR017441 GO:0005524
Prci11g2223 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Prci11g2223 566 Gene3D Transferase(Phosphotransferase) domain 1 335 548 - -
Prci11g2223 566 ProSiteProfiles Protein kinase domain profile. 258 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2223 Prci-Chr11 22529558 22536540 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2223 235 546 Receptor kinase-like Gene Family AT5G10530 58.544 1.48e-124 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci11g2223 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2223 - - pcin:129286334 1100.12