Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2219 ATGATGAAGATGTTGCAAGTAACAGTCTTCTTCTTCCTCTTGATATCCCATGCATTTTCCTTATCCTTTAATTTCTCTGGTTTCCTGTCCAATGATGACATGATATCATATGAAAAATCAGCTCGCCTTGACACTACGTCCGGATACATCGAATTGGTAAGCTCCAGCGGTAATGTTGGCCGAGCCACATATCAGAAACCGATGCACCTGTGGGACAAAGCCACCGGGAAACTCACAGATTTCTCCTCCAGATTCGCATTTGTGATTGATTCACAGAACAACACTAATTTTGGAGATGGCATGGCTTTCTTCTTAGCTCCTAATGGTTCAAAGCTTCCTAATATCCCAAAAGAAGCAGTAGGAGGTTCAATGGGTTTGATTATTGGTGGCAATGAAACGATATTTAATTCAACAGATCATCCGTTTGTTGCTGTGGAGTTTGATATCTACCCTAATGTAGACTGGGATCCTATGAATGTACATGTGGGTGTTGATATCAATTCTATTGAATCTGTGAGTACTGTGATATGGGGGGACGTGTATGATAGTATCATGAGAGGGAGAACTAATGAGGCTTTTATTAGTTACAATTCAAGTACACATAATTTAAGCATCTCGTTCACTGGTCTTCTTTTTGACAACAGGATAGTGCAACATCATCAAATAGTGGACCTGAGAAAGTACCTACCTGAATGGGTTACTTTCGGTTTCTCAGCTGCCACAGGATTATCAGTTGCAATACACAAGATCAATACATGGAGTTTCTACTCAGAGGAGTTCTCAGATATTGCTCCCACGCCAAGTCCGAACCAGAGCCCAACCCTAAGCCATAGCCAGAGCCAAACAAGCAGAAATGCTATAGCAGTTACAACCGGATTAGGGGTTGGAGGTTTTCTTTTAATTTGTGTGGTGGTATTGTTTGTCTTGTGGAAGAACAAAAAGAAAATGGAAGATGATGAGTGTAACAGGGATATGAGTGATGATTTTAAAAGAGGAACAGGGCCCAAGAAGTACTCATATGCTGAATTAGCAAGTGCTGCAAATTATTTCAAAGATGAGCACAAGCTTGGACAGGGAGGATTTGGAGGTGTCTTCAAAGGTTATCTCAAAGATTTAAACTCCTATGTTGCCATAAAGAGAATATCAGAGACTTCTAAACAAGGAATGAAGGAGTTTGCTGCAGAAGTAAGAATTATCAGTCATCTAAGGCATAGAAACTTGGTGCAACTAATCGGTTGGTGTCATGAAAGGAAAGAACTATTGCTAGTTTATGAGTATATGCCAAATGGAAGTTTATCTTCTCATCTCTTTGAAGACCAAATGTTGCTGAGATGGTCAGATAGATTTAAAATAGCTCAAGGCTTGGCCCATGCATTATTCTACCTTCACGAGGAATGCGAACAATGTGTAGTTCATAGAGACATCAAACCAAGTAACATCATGCTAGACTCAAACTTCAATGCAAGGCTTGGTGATTTTGGGTTAGCAAGACTGATAGACCATGCAAAAGGTGCACAAACTACAGCTTTAGCAGGAACTATGGGCTATATGGCTCCAGAATGTGTCACAACTGGGCGGGCTTGTAAAGAATCTGATGTCTACAGTTTTGGGGTTGTTTCCTTGGAGATAGCTAGTGGAAGAAAATCCATCAATCGCAAGGCTCCAGAAGATGAAATAAGCATAGTGAATTGGGCATGGCAACTCTATGGAAGTGGAAGAATTCTTGAAGCGGTTGATTCAAGGCTTGAAGGTGATTTTAACCAGGATCAAATCAAATGCCTCATGATTGTTGGACTGTGGTGTGCTCATCCTGATCATAATAGTAGGCCCTCAATAAGGCAAGTAATTCATGTACTCAACTTTGAAGCTCCATTTCCTAGTCTTCCTTCAAGTTATCCCATGCCAACATATATTGAATACCCGGTGTGGTCATCATTTTCAAATCTATCCAGCACCACTACTTCAGAAGTAGTCAAAACCATAACATAA 1989 0.4052 MMKMLQVTVFFFLLISHAFSLSFNFSGFLSNDDMISYEKSARLDTTSGYIELVSSSGNVGRATYQKPMHLWDKATGKLTDFSSRFAFVIDSQNNTNFGDGMAFFLAPNGSKLPNIPKEAVGGSMGLIIGGNETIFNSTDHPFVAVEFDIYPNVDWDPMNVHVGVDINSIESVSTVIWGDVYDSIMRGRTNEAFISYNSSTHNLSISFTGLLFDNRIVQHHQIVDLRKYLPEWVTFGFSAATGLSVAIHKINTWSFYSEEFSDIAPTPSPNQSPTLSHSQSQTSRNAIAVTTGLGVGGFLLICVVVLFVLWKNKKKMEDDECNRDMSDDFKRGTGPKKYSYAELASAANYFKDEHKLGQGGFGGVFKGYLKDLNSYVAIKRISETSKQGMKEFAAEVRIISHLRHRNLVQLIGWCHERKELLLVYEYMPNGSLSSHLFEDQMLLRWSDRFKIAQGLAHALFYLHEECEQCVVHRDIKPSNIMLDSNFNARLGDFGLARLIDHAKGAQTTALAGTMGYMAPECVTTGRACKESDVYSFGVVSLEIASGRKSINRKAPEDEISIVNWAWQLYGSGRILEAVDSRLEGDFNQDQIKCLMIVGLWCAHPDHNSRPSIRQVIHVLNFEAPFPSLPSSYPMPTYIEYPVWSSFSNLSSTTTSEVVKTIT 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2219 662 Pfam Protein kinase domain 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2219 662 Pfam Legume lectin domain 20 265 IPR001220 GO:0030246
Prci11g2219 662 PANTHER - 43 623 - -
Prci11g2219 662 SMART serkin_6 350 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2219 662 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Prci11g2219 662 CDD lectin_legume_LecRK_Arcelin_ConA 21 257 IPR001220 GO:0030246
Prci11g2219 662 SUPERFAMILY Protein kinase-like (PK-like) 334 646 IPR011009 -
Prci11g2219 662 ProSiteProfiles Protein kinase domain profile. 350 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2219 662 CDD STKc_IRAK 356 620 - -
Prci11g2219 662 FunFam Lectin-domain containing receptor kinase A4.3 427 639 - -
Prci11g2219 662 FunFam L-type lectin-domain containing receptor kinase IX.1 335 426 - -
Prci11g2219 662 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Prci11g2219 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Prci11g2219 662 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Prci11g2219 662 Gene3D Transferase(Phosphotransferase) domain 1 427 639 - -
Prci11g2219 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 262 IPR013320 -
Prci11g2219 662 Gene3D - 19 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2219 Prci-Chr11 22468836 22470899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2219 11 637 Receptor kinase-like Gene Family AT5G10530 48.447 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci11g2219 Pkinase 7.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2219 - - pcin:129286332 885.56