LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g2217	ATGTTGCTAGTGACAGTTTTGTTTCTCCTGTTACCACGTGCTTCCTTATTATCCTTTAACTCTTCCAGTTTCAACCCCAATAACAACGACATACAATGCAATGGATCAGCTTACCCTACACAATCATCCATCGAGTTAGTAACCAACCAGAAGGATGAAGACCAGAGTAACCGTGCGGGACGAGCCACATATCATCAACACTTGCACTTGTGGGACAAAGCCACAAGGAAACTGACAGATTTCAACACCAATTTTACCTTTGTGATTAACTCACTGGGCAGCACTAATTTTGGAGATGGGATGGCATTCTTCTTGGCTCCTATCGATTCACAGCTTCCTGATCCGCCAAAAGTGGTAGGAGGTTCAATGGGTCTGCTAATTGGTGGTGAAGAAACGATACTTAATTCAACAGATCATCCATTTGTTGCTGTGGAGTTTGATATCTATCCAAATACAGGCTGGGATCCTCCGGGTGTACATGTAGGTGTCGATATCAATTCTATTATGTCTGCTAGTACTGTGCCATGGTCGGCTAATATCACAGGAGGGGGCAAAAATGAAGCTTTCATCAGCTACAATTCAAGTATACATAATTTAAGCATCTCAGTCTCTAGTTTTATAAATAACACCATGAAGACGCAACGGCTTCATCTGATAGTTGACCTACGAGAGTACCTGCCTGAATGGGTAACTTTTGGTTTCTCAGCTGCCACAGGATCTTCTTTCGCAATACACAGGGTCAGTACATGGAGTTTCTATTCACAGGAGCTGCCAAATATTACTCCCAATCCAAGTCCGAGTCCAATCGTGAGCACAAATAGAAATGCGGATGCCACAACACTTGCAATTGGGTCAGGGGTTGGAGGGTTTGTTTTAGTTTTTGGGGTGGTGTTTTTTGTCACGTGGAAGAACAAAAAGAAAAAGGAAAATGATGACTCTAATGAGAACATGAGTGACGATGATTTTGAAAATGGAACAGGACCCAAAAAGTACTCATATGCTGACCTAGCAAGTGCAGCAAATTATTTCAAAGATGAGCACAAGCTTGGACAGGGAGGATTTGGCGGTGTCTATAGAGGTTTTCTCAAAGATTCAAACTCCGATGTGGCCATAAAGAGAATATCAGAAGGTTCTAAACAAGGGAAGAAGGATTTTGCTTCAGAAGTCAAAATTATTAGTCGACTAAGGCATCGAAACTTGGTGCAACTAATCGGTTGGTGTCATGAAAAGAAAGAACTGTTGCTGGTTTATGAGTATATGCCAAATGGAAGTTTAGATTCACATCTCTTCAAGGACCAGACGTTGTTGACATGGTCAGCCAGATTCAAAATAGCTCAAGGTTTGGCCTCTGCGTTATTGTACCTGCATGAAGAATGGGAACAATGTGTGGTTCATCGAGATATAAAATCAAGCAACATCATGCTGGACTCCAACTTCAATGCAAAACTTGGAGATTTCGGGTTAGCAAGACTTGTAGACCACGTGAAAGGATCACAAACTACAGCTTTGGCAGGAACTATTGGATATATGGCTCCTGAAAGTGTCACTACTGGAAGGGCTAGTAAAGAATCTGATGTGTATAGTTTTGGAGTTGTTGCTTTGGAGATAGCTTGTGGAAGAAAACCCATCAATCATGACGCTCCAGAAAATGAAATAAACATAGTAAATTGGTTATGGCATCTCTATGGAACTGGGAAAATTCTGGAAGCAGTTGATTCAAGGCTTGAAGGTCATTTTGACCATGATCAAATCAAATGCCTCATGATCGTTGGGCTCTGGTGTGCTCATCCTGATCATACTCGTAGGCCTTCAATAAGGCAAGCCATTCATGTGCTTAACTTCGAAGCTTCACTTCCTAGCCTTCCTTCAAGTTATCCTATGCCAACGTATAATGAATTTCCAACATCATTGTCAATCCTATCAAGCGCCACCAATGCTTCAGAGGCAAGTCAAAACTAG	1959	0.4181	MLLVTVLFLLLPRASLLSFNSSSFNPNNNDIQCNGSAYPTQSSIELVTNQKDEDQSNRAGRATYHQHLHLWDKATRKLTDFNTNFTFVINSLGSTNFGDGMAFFLAPIDSQLPDPPKVVGGSMGLLIGGEETILNSTDHPFVAVEFDIYPNTGWDPPGVHVGVDINSIMSASTVPWSANITGGGKNEAFISYNSSIHNLSISVSSFINNTMKTQRLHLIVDLREYLPEWVTFGFSAATGSSFAIHRVSTWSFYSQELPNITPNPSPSPIVSTNRNADATTLAIGSGVGGFVLVFGVVFFVTWKNKKKKENDDSNENMSDDDFENGTGPKKYSYADLASAANYFKDEHKLGQGGFGGVYRGFLKDSNSDVAIKRISEGSKQGKKDFASEVKIISRLRHRNLVQLIGWCHEKKELLLVYEYMPNGSLDSHLFKDQTLLTWSARFKIAQGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHVKGSQTTALAGTIGYMAPESVTTGRASKESDVYSFGVVALEIACGRKPINHDAPENEINIVNWLWHLYGTGKILEAVDSRLEGHFDHDQIKCLMIVGLWCAHPDHTRRPSIRQAIHVLNFEASLPSLPSSYPMPTYNEFPTSLSILSSATNASEASQN	652

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g2217	652	FunFam	L-type lectin-domain containing receptor kinase IX.1	15	261	-	-
	Prci11g2217	652	ProSiteProfiles	Protein kinase domain profile.	343	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2217	652	CDD	lectin_legume_LecRK_Arcelin_ConA	30	254	IPR001220	GO:0030246
	Prci11g2217	652	Gene3D	Phosphorylase Kinase; domain 1	328	419	-	-
	Prci11g2217	652	CDD	STKc_IRAK	349	613	-	-
	Prci11g2217	652	SUPERFAMILY	Concanavalin A-like lectins/glucanases	15	258	IPR013320	-
	Prci11g2217	652	SUPERFAMILY	Protein kinase-like (PK-like)	327	631	IPR011009	-
	Prci11g2217	652	Gene3D	-	15	257	-	-
	Prci11g2217	652	ProSitePatterns	Legume lectins alpha-chain signature.	226	235	IPR000985	-
	Prci11g2217	652	FunFam	L-type lectin-domain containing receptor kinase IX.1	328	419	-	-
	Prci11g2217	652	Pfam	Legume lectin domain	17	260	IPR001220	GO:0030246
	Prci11g2217	652	PANTHER	-	34	616	-	-
	Prci11g2217	652	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	463	475	IPR008271	GO:0004672\|GO:0006468
	Prci11g2217	652	ProSitePatterns	Protein kinases ATP-binding region signature.	349	372	IPR017441	GO:0005524
	Prci11g2217	652	SMART	serkin_6	343	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2217	652	Gene3D	Transferase(Phosphotransferase) domain 1	420	633	-	-
	Prci11g2217	652	Pfam	Protein kinase domain	343	610	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2217	652	FunFam	Lectin-domain containing receptor kinase A4.3	420	632	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g2217	Prci-Chr11	22367069	22369240	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g2217	2	631	Receptor kinase-like Gene Family	AT5G10530	49.456	0.0	585

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Prci11g2217		Pkinase	2e-54	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g2217	-		-	pcin:129286332	884.789