LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g2215	ATGCAACGTCTCACTATGTTGGTGGTTTCAGTTTTCTTACTCTTGATACCCCTTGCCTTTTCCGTAAGCTTTATCAACACCAGTTTCGTGGATGACATAATAAATTATGAAAAACTTTCTGGCCCTGTAGGAACATACATCGACTTGGTAAGATCCAACGACACTGTCGGTCGAGCTACATGTAGCCAACCGATGCACTTGTGGGACAAAGCCACCGGCAAACTCGCAAATTTCAACACCAATTTCACCTTTGTGATTGATTCACAGGGCAGCTATGATTATGGAGATGGGATGGCCTTCTTTTTAGCCCCTACTGGTTCAGTGCTTCCTAATATTGTAAAAGTTGGAGGAGGTGCTATGGGTCTGATTATTGGTGGTCCAGAAACGATTTTTAACTCAACAGATTATCCATTTGTTGCTGTGGAATTTGATATCTATTCCAATTGGGACCCTAATGTCAATGAAGGCTGGGATCCTCGGTATCAACATGTGGGTGTCGATATCAATTCCATTAATTCTACTGTCACCGTGCCATGGTCGGCTAATATCCCAGGAGGGGGCACAAATGAAGCTTTCATCAGCTACAATTCAAGTACACGTAATTTAAGCATCTCAGTCTCTAGTGTTATAGACAACACCAAGAAGATGCAACAGCTTCATCAGATAGTTGACCTACGAGAGTACCTGCCTGAATGGGTGACTTTTGGTTTCTCAGCTGCCACAGGATCTTCTTTTGCAGCACACAGGATCAGCAGATGGAGTGTCTACTCAGAGGAGCTCCCAAATATTGCTCCCAATCCAAGTCGAAATGCCACAGCACTTGCAATTGGGTTAGGGGTTGGAGGGTTTGTTTTAGTTTGTGGGGTGGTATTGTTTGTCTTGTGGAAGAACAAAAAGAAAATGGAAGACGATGATGAGTCTAATGAGAACATGAGTGATGATGACTTTGAAAGAGGAACAGGACCCAAAAAATACTCATATGCTGAGCTAGCAAGTGCCGCAAATTATTTCAAAGATGAGCACAAGCTTGGACAGGGAGGATTTGGTGGTGTCTATAGAGGATTTCTCAAAGATTCAAACTCCCATGTTGCCATAAAGAGAATATCAGAGGGTTCTAAGCAAGGGAAGAAGGAGTTTGCTTCAGAAGTAAGTATTATCAGTCAACTTAGGCATCGAAACTTGGTGCAACTAATCGGTTGGTGTCATGAAAGGAAAGAACTGTTGCTGGTTTATGAGTATATGCCAAATGGAAGTTTAGATTCACATCTCTTCAAGGACCAGAGGTTGTTGACATGGTCAGTCAGATTCAAAATAGCTCAAGGCTTGGCCTCTGCATTATTGTACCTGCATGAAGAATGGGAACAGTGTGTGGTTCATCGAGATATAAAATCAAGCAACATCATGCTGGACTCCAACTTCAATGCAAAACTTGGAGATTTCGGATTAGCAAGACTTGTAGACCATGCAAAAGGTGCACAAACTACAGCTCTGGCAGGAACTATGGGCTATATGGCTCCTGAATCTGTCACAACTGGGAGGGCTAGTAAAGAAACTGATGTATACAGTTTTGGAGTTGTTGCTTTGGAGATAGCTTGTGGAAGAACACCGATCAACCGTGAGGCTCCAGAAAATGAAATAAACATAGTCAAATGGGTATGGGATCTCTATGGAAGGGGGAGAATTCTCGAAGCAGTTGATTCAAGACTAGAAGGAGATTTTGACCAGGATCAAATCCAATGCCTAATGATTGTTGCGCTGTGTTGTGCTCATCCTGATCATACTCGTAGGCTTTCAATAAGGCAAGCCATTCATGTGCTTAACTTTGAAACTCCTTTTCCTAGTCTTCCTTCAAGTTATCCCATACTAACGTATAATGAATTTCCAGCATCATTTTCTATTCTGTCCAGCACCAATGCTTCAGAGGTAAGTCAAAACCAGAATATGAGCTTTAGTTCCAATACAAACTCTTATGGTTTCACTTCAACTTCTGGTGATGATGTTTCACCAAGTGTGTCACTTATGTACTCACGCAAAAACTAA	2040	0.4206	MQRLTMLVVSVFLLLIPLAFSVSFINTSFVDDIINYEKLSGPVGTYIDLVRSNDTVGRATCSQPMHLWDKATGKLANFNTNFTFVIDSQGSYDYGDGMAFFLAPTGSVLPNIVKVGGGAMGLIIGGPETIFNSTDYPFVAVEFDIYSNWDPNVNEGWDPRYQHVGVDINSINSTVTVPWSANIPGGGTNEAFISYNSSTRNLSISVSSVIDNTKKMQQLHQIVDLREYLPEWVTFGFSAATGSSFAAHRISRWSVYSEELPNIAPNPSRNATALAIGLGVGGFVLVCGVVLFVLWKNKKKMEDDDESNENMSDDDFERGTGPKKYSYAELASAANYFKDEHKLGQGGFGGVYRGFLKDSNSHVAIKRISEGSKQGKKEFASEVSIISQLRHRNLVQLIGWCHERKELLLVYEYMPNGSLDSHLFKDQRLLTWSVRFKIAQGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHAKGAQTTALAGTMGYMAPESVTTGRASKETDVYSFGVVALEIACGRTPINREAPENEINIVKWVWDLYGRGRILEAVDSRLEGDFDQDQIQCLMIVALCCAHPDHTRRLSIRQAIHVLNFETPFPSLPSSYPILTYNEFPASFSILSSTNASEVSQNQNMSFSSNTNSYGFTSTSGDDVSPSVSLMYSRKN	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g2215	679	SMART	serkin_6	337	613	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2215	679	SUPERFAMILY	Protein kinase-like (PK-like)	321	625	IPR011009	-
	Prci11g2215	679	PANTHER	-	49	610	-	-
	Prci11g2215	679	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	457	469	IPR008271	GO:0004672\|GO:0006468
	Prci11g2215	679	FunFam	L-type lectin-domain containing receptor kinase IX.1	322	413	-	-
	Prci11g2215	679	Pfam	Legume lectin domain	22	263	IPR001220	GO:0030246
	Prci11g2215	679	CDD	STKc_IRAK	343	607	-	-
	Prci11g2215	679	FunFam	Lectin-domain containing receptor kinase A4.3	414	626	-	-
	Prci11g2215	679	SUPERFAMILY	Concanavalin A-like lectins/glucanases	46	257	IPR013320	-
	Prci11g2215	679	Gene3D	-	18	264	-	-
	Prci11g2215	679	CDD	lectin_legume_LecRK_Arcelin_ConA	22	254	IPR001220	GO:0030246
	Prci11g2215	679	Pfam	Protein kinase domain	337	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2215	679	ProSitePatterns	Legume lectins alpha-chain signature.	229	238	IPR000985	-
	Prci11g2215	679	ProSitePatterns	Protein kinases ATP-binding region signature.	343	366	IPR017441	GO:0005524
	Prci11g2215	679	ProSiteProfiles	Protein kinase domain profile.	337	613	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2215	679	MobiDBLite	consensus disorder prediction	660	679	-	-
	Prci11g2215	679	Gene3D	Phosphorylase Kinase; domain 1	322	413	-	-
	Prci11g2215	679	Gene3D	Transferase(Phosphotransferase) domain 1	414	627	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g2215	Prci-Chr11	22317568	22319881	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g2215	12	625	Receptor kinase-like Gene Family	AT5G10530	48.811	0.0	557

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Prci11g2215		Pkinase	7.6e-54	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g2215	-		-	pcin:129286332	992.645