Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2214 ATGGAAAACCTAATGGTGCCTTTTGCTACTTCAGCTTTAGCCGGGGAGGTGTTCCCTTTCAAAGAAGAAGAAAAGAAAATAGAGGAATCTGCATTAGAGAATGGACGTTCAATGATCAGTACTCCTACCATCTCCCAGTTCCATGGGGTGGATGACGCAGAGATGGCCAAAGTCATTGCTCACTATCTCCACAGTTTAACTCACATAAAGGATCACATCTTAGGTTATCCAACTAATCTAGACTTCAACTACGATGCACTGGTGCAGTTGCTACGTTTCCACTTGAACAATGCTGGTGATCCATTTATTGGAAACGGTTATTCGCTGAACTCAAATCCATTTGAGCTATGCGTGCTGGATTGGTTTGCCAAACTATGGCAAATAGAGGAGAATGAGTACTGGGGATATGTTACCAATGGTGGTACTGAAGGAAATTTTCATGGGATTTTAGTAGGGAGAGAACTATATCCTGATGGAATTCTTTACACATCACGGGACTCGCATTATTCAGTGTTTAAAGTAGCCAGGCTTCTTAGAATCAAGTGTGTGGTGGTAGGGACTCTAATCTCAGGTGAGATTGACTATAAGGAACTAAAGGCGTCTCTTTTATCAAACAAGGACAAGCCAGCAATCATCAACCTAAACATAGGGACAACTTTAAAGGGAGCCATTGATGACCTTGATCTTGTACTACAATCACTTGAAGATTGTGGTTTCACTCAAGATCGATTCTACATTCATTGTGATGCCGCATTATTTGGATTGATGGTACCTTTTGACAATGGGGCACCAGATATTTCTTTTAAAAAACCTATCGGAAGCGTAACTATTTCTGGCCATAAGTTCCTGGGCTGTCCAATGCCTTGTGGCATTCTGATAACTCGTTTAAAATACATTGATTTTCTCTCAAGAGAAGTAGAATACATCGCTTCAAGAGATGCCACCATCTCAGGAAGTCGAGGAGGCCATGCTCCGATCTTCATTTGGTATGCTCTCAACAAGAAAGGCTTCAATGGCCTTCGAGAAGAAGTTCAAGAGTGCATCAAGAAGGCGGTCTACCTTCAAGATTGCTTGAGAGACCAGGGCATCGGAGCCATGTTAAACAAGTCTAGCAACACTGTGGTGTTTGAGAGGCCTCGAGATGATGCGTTTGCTCGTAAGTGGAGCTTGGCTAACAATGGGAATATATCACACGTGGTAGTGATGCAACATGTGTCGGAGGAAATGTTAGATTCCTTTGTGAGTGAGTTTGTGAAGAATCGGTCTGCATGGTATCAAGATTATAAGAGGCAAATGCAGCCTCCTTGCATTGCTGAAGATATTGGTATTGAGAATTGCGCTTGTGCTTTTCACAAGATGTCGATTTCATGA 1371 0.4238 MENLMVPFATSALAGEVFPFKEEEKKIEESALENGRSMISTPTISQFHGVDDAEMAKVIAHYLHSLTHIKDHILGYPTNLDFNYDALVQLLRFHLNNAGDPFIGNGYSLNSNPFELCVLDWFAKLWQIEENEYWGYVTNGGTEGNFHGILVGRELYPDGILYTSRDSHYSVFKVARLLRIKCVVVGTLISGEIDYKELKASLLSNKDKPAIINLNIGTTLKGAIDDLDLVLQSLEDCGFTQDRFYIHCDAALFGLMVPFDNGAPDISFKKPIGSVTISGHKFLGCPMPCGILITRLKYIDFLSREVEYIASRDATISGSRGGHAPIFIWYALNKKGFNGLREEVQECIKKAVYLQDCLRDQGIGAMLNKSSNTVVFERPRDDAFARKWSLANNGNISHVVVMQHVSEEMLDSFVSEFVKNRSAWYQDYKRQMQPPCIAEDIGIENCACAFHKMSIS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2214 456 Pfam Pyridoxal-dependent decarboxylase conserved domain 159 371 IPR002129 GO:0016830|GO:0019752|GO:0030170
Prci11g2214 456 SUPERFAMILY PLP-dependent transferases 69 419 IPR015424 -
Prci11g2214 456 Gene3D Aspartate Aminotransferase, domain 1 332 421 IPR015422 GO:0003824
Prci11g2214 456 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 274 295 IPR021115 GO:0016831
Prci11g2214 456 Gene3D - 92 331 IPR015421 GO:0003824
Prci11g2214 456 PANTHER - 44 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2214 Prci-Chr11 22017257 22019135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2214 216 363 Calmodulin-binding Proteins AT1G65960 26.347 3.11e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2214 K25193 - gmx:100781665 575.089