Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2212 ATGGGGATATCTCAGCACTGGAGATCAAAAAATCATGTGCTTCTTTCTCTGTTCATAACCAAGATTTTATTGCTTCTGATAATCCCAGCAGCTGGTGCGACCTCAATAACCTTCAACTATGAGAAATTTCTTGACACGGCTAATCAGAGCTTGAACCTTGAAGGAGATGTCTTTCAGGAAAATGGGATGCTCAACCTCACCAGATACAAGAAAGATAGTGCAGGGAGAGTAACGTATAGCAAGTTGTTGCAGCTTTGGGACAATGAAACAAGAACACTTGCAAACTTCACTACTCGTTTCAGCTTCATCATCAATGCACTAAACAAAACTCGTGATGGGATTGGAGATGGCATCACATTCTTCTTGGCACACCCAGATTTTCCACTTCCAGTGCCAGATGGCACTGGTATTGGTCTTGTGGGTCGTAGAGAGATGAAAGATCCAAATTACCCCAACGAACATCCATTTGTAGCAGTAGAGTTTGACACCTTTCCCAACGTGGATGAGGGTGATCCACCTTATGATCACGTTGGAATCAATGTAAAACAAATGTGGACTCCTTACACAACACAATGGTACACCAAGAATGATGGTAGAAAGTATGATGCTGAGATTTCCTACAATTCTAGCTCATACCAATTAACTGTCAATTTTGCTGGATTTAAGGATAATGCCTCAATTCAACAAGACTATTCCCATAAGATTGACTTGAGAGAGTACCTGCCAGAACAAGTTCAGTTTGGTTTCTCTTCATCCACAGGATTACAATTTGAGTTGCATACACTAAGTTCATGGTCCTTTAATGCAAATGCTGCAATATTGGGAGTAGTGAACAAGGGTAAAAGCAACAAGCAGGGATTGATCATTGGATTGAGCATTGGATCAGTTGTAGTGATTGCAGGGTTATGCATAGCTTGGTTTCTGATATGGAAGTTTAATTGCAGGGCAAAGAAAAATCATGATGGCTTGGATCTTTCCCTGGACGAAGATTTTGAAAGCGTTGGACCGAAGAAATTTTCTTATAATGAGCTCGTAAGAGCAACAGACCACTTTGCAGAGGAACACAAACTTGGAGAAGGAGGCTTTGGTGGGGTCTACAAAGGATTTTTGAGAGGCTTAAATACTTATGTAGCAATTAAGAAGGTGTCCCAAGAATCTAAACAAGGAGTAAAGGAGTATGCCTCTGAAGTAAAGATCATTAGTCAACTAAGGCACAGGAATTTGGTGCAACTGATGGGTTGGTGCCATGAGAAGAATGATTTTCTACTCATTTATGAGTTCATGCCAAATGGAAGCTTAGATTACCATTTATTTCAAAGCAGAAACCTCTTGACAGGGCCAACTAGATATAATATTGCTCAAGGCCTAGCCGCTGCTATACTCTACCTGCATGAAGAGTGGCAGCAATGTGTAGTCCACAGAGACATAAAATCGAGCAATATCATGTTGGATTCAAATTTCAATACTAAACTTGGAGATTTTGGGCTAGCGAGGATCGTGGAACATGGGAAAGGGTTAACAACAACTATTGCAGCAGGAACAAAAGGATACATGGCTCCTGAATGTTTGGCCATGGGTAAGGCAACAAAAGAGTCTGACATGTACAGTTTTGGTGTTGTTGCTTTGGAATTAGCTTGTGGGAGAAAACCGATTGACCCAAATGCTAGTGATGAACAGTTCATGATGGTGGAATGGGTATGGGAACTCTATGGAAGAGGTGAGCTTCTTGAAGCAATTGACAAAAGGCTTGATAATGGAGATTTTGATGAGCAAGAACTTGAAAGGTTAATGATTCTTGGGCTATGGTGTGCTCATCCAGATTACACTATGAGGCCTACAATTAGACAAGCTCTTCATGTACTTAACTTTGAAGCTCCATTGCCCACTCTCCCACCAGTAATGCCAAAACCAGTCTATGTTGCTCCAACTTTTTCAGATATTGGTTCTTCAAATTTTTCATCTGGTTATGCTAGTTCTGCTGCAACCAATCAAGCTAGGCCTTCACCTAGTAATAGATCATACACTGGATCCTCACAATCATCCACATCAGGCACCCATCAAGGAAGAAGAAAAGCCAAGGAAGTTTCTCTTTAG 2094 0.4107 MGISQHWRSKNHVLLSLFITKILLLLIIPAAGATSITFNYEKFLDTANQSLNLEGDVFQENGMLNLTRYKKDSAGRVTYSKLLQLWDNETRTLANFTTRFSFIINALNKTRDGIGDGITFFLAHPDFPLPVPXDGTGIGLVGRREMKDPNYPNEHPFVAVEFDTFPNVDEGDPPYDHVGINVKQMWTPYTTQWYTKNDGRKYDAEISYNSSSYQLTVNFAGFKDNASIQQDYSHKIDLREYLPEQVQFGFSSSTGLQFELHTLSSWSFNANAAILGVVNKGKSNKQGLIIGLSIGSVVVIAGLCIAWFLIWKFNCRAKKNHDGLDLSLDEDFESVGPKKFSYNELVRATDHFAEEHKLGEGGFGGVYKGFLRGLNTYVAIKKVSQESKQGVKEYASEVKIISQLRHRNLVQLMGWCHEKNDFLLIYEFMPNGSLDYHLFQSRNLLTGPTRYNIAQGLAAAILYLHEEWQQCVVHRDIKSSNIMLDSNFNTKLGDFGLARIVEHGKGLTTTIAAGTKGYMAPECLAMGKATKESDMYSFGVVALELACGRKPIDPNASDEQFMMVEWVWELYGRGELLEAIDKRLDNGDFDEQELERLMILGLWCAHPDYTMRPTIRQALHVLNFEAPLPTLPPVMPKPVYVAPTFSDIGSSNFSSGYASSAATNQARPSPSNRSYTGSSQSSTSGTHQGRRKAKEVSL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2212 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 272 IPR013320 -
Prci11g2212 698 ProSitePatterns Legume lectins beta-chain signature. 158 164 IPR019825 -
Prci11g2212 698 CDD lectin_legume_LecRK_Arcelin_ConA 38 271 IPR001220 GO:0030246
Prci11g2212 698 FunFam L-type lectin-domain containing receptor kinase IX.1 337 428 - -
Prci11g2212 698 ProSiteProfiles Protein kinase domain profile. 352 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2212 698 CDD STKc_IRAK 358 623 - -
Prci11g2212 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Prci11g2212 698 Pfam Protein kinase domain 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2212 698 SMART serkin_6 352 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2212 698 SUPERFAMILY Protein kinase-like (PK-like) 336 646 IPR011009 -
Prci11g2212 698 Gene3D Transferase(Phosphotransferase) domain 1 429 641 - -
Prci11g2212 698 FunFam Lectin-domain containing receptor kinase A4.3 429 642 - -
Prci11g2212 698 Pfam Legume lectin domain 36 271 IPR001220 GO:0030246
Prci11g2212 698 MobiDBLite consensus disorder prediction 655 687 - -
Prci11g2212 698 ProSitePatterns Protein kinases ATP-binding region signature. 358 382 IPR017441 GO:0005524
Prci11g2212 698 MobiDBLite consensus disorder prediction 655 698 - -
Prci11g2212 698 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Prci11g2212 698 PANTHER - 58 632 - -
Prci11g2212 698 Gene3D - 34 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2212 Prci-Chr11 21981816 21995356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2212 11 640 Receptor kinase-like Gene Family AT5G10530 44.860 1.52e-172 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci11g2212 Pkinase 2.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2212 - - cam:101491058 690.649