Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2200 ATGTTGCGGCTTGCTATTCATCGAGTGAGGAAGTTGAACAATTTGAGACCCCAGATCTTCGCTTTGGGAAGTTACCAATTCTCTACGGCTGCTGAGACCAGGAAGCTTAATCCGCCGAGGGTTCCAAATCTTATTGGGGGCAGTTTTGTTGACTCAAAATCATCTACATTCATCGATGTGATAAACCCTGCAACACAAGAAGTTGTGTCACAACTTCCTTTGACAACAGATGAAGAGTTTAAAGCTGCGGTATCTGAAGCTAAAAAAGCTTTTCCATCATGGCGTAATACTCCCATCACAACTCGCCAACGTGTTATGCTGAAACTCCAGGAGCTTATACGCAGAGATATGGATAAACTCGCTCTGAATATTACCACTGAACAAGGAAAGACATTGAAGGATGCACAAGGAGATGTATTCCGTGGCTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTTTACAAATGGGGGAGTATGTTTCTAATGTATCACATGGAATTGATACTTACAGCATAAGAGAACCACTTGGTGTTTGTGCTGGGATATGCCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCAGTGGCAGTTACTTGTGGGAATACCTTTATTCTAAAGCCGTCAGAAAAAGATCCAGGGGCTGCTGTAATGCTTGCAGAATTAGCATTGGAGGCCGGTCTTCCTGAGGGTGTCTTAAATGTTGTTCATGGAACTCATGATATTGTAAATGCTATTTGTGATGATAATGACATTAAAGCTGTATCTTTCGTTGGTTCAAATGTTGCTGGAATGCATATATATTCAAGAGCATCTGCTAAAGGAAAACGTGTTCAATCTAATATGGGAGCCAAAAATCATGCAATTGTCATGTCTGATGCAAACGTTGATGCTACTGTGAACGCTTTAGTTGCTGCTGGTTTTGGTGCTGCAGGACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGATCAAAACCATGGGAATCTATATTAGCAGAGCGTGCCAGTGCACTTAAAACAAGTGTTGGAACTGATCCAAATGCAGACCTTGGTCCAGTCATCAGCAAACAGGCAAAGGAGCGCATACACAAATTAATTCAATCTGGTGTTGAAAGTGGGGCCAGACTGTTGCTTGATGGAAGAAATATAGTGGTTCCAGGCTATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTCAGTGCAAACATGGAATGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTCATGGAGGTGTGCTGACAGTTTGGAAGAGGCCATAAACATTGTTAACAGAAACAAGTATGGAAATGGTGCTTCTATATTTACTACATCTGGTGTTGCAGCAAGGAAGTTTCAGACTGAGATTGAAGCTGGACAGGTGGGCATCAATGTTCCCATTCCAGTTCCATTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCAGGAGATCTCAATTTCTATGGGAAGGCTGGGGTTAACTTCTATACTCAGATTAAAACAGTGACTCAGCAATGGAAGGATTCTGCTGGTGGTAGCAGAATTAACTTGGCAATGCCAACCTCTCAAAAATCTTCTTGA 1617 0.4249 MLRLAIHRVRKLNNLRPQIFALGSYQFSTAAETRKLNPPRVPNLIGGSFVDSKSSTFIDVINPATQEVVSQLPLTTDEEFKAAVSEAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNITTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAAVMLAELALEAGLPEGVLNVVHGTHDIVNAICDDNDIKAVSFVGSNVAGMHIYSRASAKGKRVQSNMGAKNHAIVMSDANVDATVNALVAAGFGAAGQRCMALSTVVFVGGSKPWESILAERASALKTSVGTDPNADLGPVISKQAKERIHKLIQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDVSANMECYKEEIFGPVLLSWRCADSLEEAINIVNRNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSAGGSRINLAMPTSQKSS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2200 538 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 9 534 IPR010061 GO:0004491
Prci11g2200 538 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 43 518 IPR010061 GO:0004491
Prci11g2200 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 311 322 IPR016160 GO:0016491
Prci11g2200 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 495 IPR016162 GO:0016491
Prci11g2200 538 SUPERFAMILY ALDH-like 34 519 IPR016161 GO:0016491
Prci11g2200 538 Pfam Aldehyde dehydrogenase family 49 514 IPR015590 GO:0016491
Prci11g2200 538 CDD ALDH_F6_MMSDH 41 518 IPR010061 GO:0004491
Prci11g2200 538 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 286 487 - -
Prci11g2200 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 286 487 IPR016163 GO:0016620
Prci11g2200 538 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 45 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2200 Prci-Chr11 21851984 21861076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2200 1 502 Aldehyde Dehydrogenase Gene Family AT2G14170 78.968 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2200 K00140 - gmx:100791508 953.355