LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g2184	ATGGAAGTTGTTGGATGTGTGTCAAGCATCACAGGCTTGTGTATTAGTTGTCTACATGAAGTAATTGGAAAAAAGTACAAACACTTGAGAACAGCCAAAAGGAGTTCTCAAAAGCTGAATAATTTGATGGAAAAGTTGGAAGCTCATAAAAAAGATGTTGAACATGAAGTAAATAAATTATGGTATCTAAAAGGGGCTGAATCAACAAATGTATGTAATTTATGGCTTGAGCAAGCTGAACAGCTGAAAAGAGAAGTAAGCAACCTCATAGGTGAAAATGGCCTTCTTAGACCGGATAAAGGATGTTGTTTCATTTGTTCAAGAATCAAGTTAGGGGAACTTATAGAGAAGAAGATCGTAGATACTAATGAACTTTTAGAGAATGTTCCACATTCAGATGATTCAGTTGTCAATTTTGTAACCAAGAGAGGTGTTTTGCTTTCTGCAACACCAATGATGGAATACGAAACACACGAGCAAATATTTATGAAGATCTGGGGATTCTTGTTTGATGAGCATGCCAGAAGGATTGGTATTTTTGGGGCGGGAGGAGCCGGTAAAACAACTATTATGTCAGAAGTTAATAATCGCCTGTTGATTAATAGCACTGAATTTAACTGCATTATTTGGGTGGAAGCATCAAAGGATCTACAGAAGTTGCAGCAGGATATAGCTGTGAAGTTGGATTTGACTTTTCAAGAAGCTGATGATGAAAGAACAAGAGCCTCGAAATTGTTAGAAGCTTTTAATAGGAGGAAGAGATTTACACTGATTTTAGATGAAGTTTGGGAACCATTCAATATTGAAAGCATTGGAATCCCTGTGCCAACAGTAGAGAATGGTTGTAAATTAGTGATTATAACTCGAGATGTTAGAGTGTGTAGAGTTATGGAAACAGACAAAGATGTGGAGGTGAAAGTTCTTTCAAAAGAAGAAGCATGGGATCTCTTCAAGGACAAAGCTGGGGAACAAGTGCTATCAAATCCAAATATACAATCAATTGCAATGGATGTGGCAAAAGAATGTGGTGGTTTGCCTCTAGCTATTGTTGCAGTTGGACGTGCATTGAGAAATACAACTAACATAAGAGAGTGGGAGAATGCATTGGCAGAGTTAAGAACTTCAAATACTGGCATATATACCATCGATGAAATGGTGTGTTCTCGTTTGAAGTTGAGCTATTCAACACTAAAGGATGATACAAGGCGATCGTGCTTTCTATATTGTTCCTTATACCCAAAAGGTCACCTAATTGATGAGAATGAATTGATTAATTATTGGGTTTGGGAAGATTTATTGGAAGGTCAAAGCATGTTTGTGATGAAACGAAAGGGGCAAATGATTATAGATGAACTAATATCAGGATGCTTGCTGGAATTGAAGATTGAAAATGGGGTGAGATTTGTTAAACTGCATGATATGGTAAGAGACATGGCCATCACAATCATGAGCACAAAGCCTAGATGCATTGTGAATGCTGGCATGGGACAAGTAAAACCAGCAATGCCTCAGGAATGGAGAGAGGATATTCAATGGGTATCGTTGATGAGAAATGATGTGAAATCTATAGACTTCAGTCCAATGTGTCCTAGAATCACTTCTTTGCTACTTCAGTATAACTCATTGGAAAACCTATCAGGCCCCTTCTTCAACAACATGCATTGGCTAAAAGTTCTTAATCTCTCCTATACTGGGATTCATGTTTTGCCAGTGTCTCTTTCGAATTTGTATAATCTACATGCCTTATTGTTGAGTCACTGTTGGAATCTTGTTGAAGTTCCATCCTTAGAGAGGCTCACTAAATTGAAGCATTTAGATTTTTCATTTTCTAGAGGTTTAACAAAACTTCCACTAGGGATGGAACAATTGACTGATTTGAGACACCTGGATTTCTCCTTCACGTCTGTCCAAAACTTACCAACTGGACTCATATCCAAATTTACCCTTCTGGAGGGCTTGTTGATGTTGGGTTCGCATATGATTGGAGTATCATCTAAGCGTGCAGAGCGCACCTTGTATCCAGTGACAGTGGAAGAAATCATATCCTGTCATAATCTGTCTCTTCTACACATGCAATTCTTTGACCTTGAAGACTATCAAAAGTTTGCTAAATTTCTGAAGTCATCTCAATTAAAGGAGTTGAAACTTGTTGTCGGGCTCCACAATCCAGAATTTTCTGAGAAAACTGGTTTAGCAATAGGAGGGGGAAATAGACGGGTTTCAGAAGCCGAGATTACTGCATTGATTCCACTTGATGTAGAGGAGTTAATAATTTGTGATATTTTTGGTATGGAATGCTTGTCTTTGTACTTATTGGATGCAATGTACTTGAAAAGGTGCCGATTAGATGGGTGTCCAGACATCAAATGCATTGTTGAATCAAAGGAGAACAATTTGTCCCTGCTAGAGAGATTGAATCTGCGTCATTTGCCAAAGTTGAGGATGATCTGTGGGAAAGTGGTGAGACCACGTACCCTAATGAACCTCAAGAGCATTCATGTGGCATCCTGTTGGTCGTTGAAATGTCTGTTCCCGAGGCAGCTTATGGACGAGCTTAAAAGTCTGGAAGAAATTGCCATCGATCGTTGCTTCGAGATGGAAGAAATCATTGAAGGAGAGAGGAATGCAAACGCTGAAAACAGCAGCCATGCTGCCAAAGTGATCCTTCCAAAATTGCAAAGGCTGAAATTGGACAAATTGCCAACACTGAAAAGCATATACAAAGGGGACATTGAATGCAATTCTCTGCGCACTATTGAAGTTGAGGACTGCGATGCTCTGAATAAGTTGCCTCCGGGTTTGTTTGGAGCAGAGGCTGGTCAGCAAATCTCACCATCAGCCACCCTCCAACAAATAACATGTACATACACATGGTGGCAATCATTGCAGTGGGACCAACCTGAAGCTAAGATTCTCCTTCAACCATACTTAGTCAATTACTTTAACAGGGAGACATGCAGGGACAAGATTTTGAGTCCGAGCACCAGCTATACTGCCGTCAGCAGCAGTTATACTGCCTTCAGCGGCAGTTAG	3033	0.3966	MEVVGCVSSITGLCISCLHEVIGKKYKHLRTAKRSSQKLNNLMEKLEAHKKDVEHEVNKLWYLKGAESTNVCNLWLEQAEQLKREVSNLIGENGLLRPDKGCCFICSRIKLGELIEKKIVDTNELLENVPHSDDSVVNFVTKRGVLLSATPMMEYETHEQIFMKIWGFLFDEHARRIGIFGAGGAGKTTIMSEVNNRLLINSTEFNCIIWVEASKDLQKLQQDIAVKLDLTFQEADDERTRASKLLEAFNRRKRFTLILDEVWEPFNIESIGIPVPTVENGCKLVIITRDVRVCRVMETDKDVEVKVLSKEEAWDLFKDKAGEQVLSNPNIQSIAMDVAKECGGLPLAIVAVGRALRNTTNIREWENALAELRTSNTGIYTIDEMVCSRLKLSYSTLKDDTRRSCFLYCSLYPKGHLIDENELINYWVWEDLLEGQSMFVMKRKGQMIIDELISGCLLELKIENGVRFVKLHDMVRDMAITIMSTKPRCIVNAGMGQVKPAMPQEWREDIQWVSLMRNDVKSIDFSPMCPRITSLLLQYNSLENLSGPFFNNMHWLKVLNLSYTGIHVLPVSLSNLYNLHALLLSHCWNLVEVPSLERLTKLKHLDFSFSRGLTKLPLGMEQLTDLRHLDFSFTSVQNLPTGLISKFTLLEGLLMLGSHMIGVSSKRAERTLYPVTVEEIISCHNLSLLHMQFFDLEDYQKFAKFLKSSQLKELKLVVGLHNPEFSEKTGLAIGGGNRRVSEAEITALIPLDVEELIICDIFGMECLSLYLLDAMYLKRCRLDGCPDIKCIVESKENNLSLLERLNLRHLPKLRMICGKVVRPRTLMNLKSIHVASCWSLKCLFPRQLMDELKSLEEIAIDRCFEMEEIIEGERNANAENSSHAAKVILPKLQRLKLDKLPTLKSIYKGDIECNSLRTIEVEDCDALNKLPPGLFGAEAGQQISPSATLQQITCTYTWWQSLQWDQPEAKILLQPYLVNYFNRETCRDKILSPSTSYTAVSSSYTAFSGS	1010

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g2184	1010	Coils	Coil	29	59	-	-
	Prci11g2184	1010	SUPERFAMILY	L domain-like	466	952	-	-
	Prci11g2184	1010	Coils	Coil	72	92	-	-
	Prci11g2184	1010	FunFam	Probable disease resistance protein At1g63360	394	481	-	-
	Prci11g2184	1010	Gene3D	-	308	393	IPR042197	-
	Prci11g2184	1010	PRINTS	Disease resistance protein signature	342	356	-	-
	Prci11g2184	1010	PRINTS	Disease resistance protein signature	597	613	-	-
	Prci11g2184	1010	PRINTS	Disease resistance protein signature	176	191	-	-
	Prci11g2184	1010	PRINTS	Disease resistance protein signature	249	263	-	-
	Prci11g2184	1010	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	30	931	-	-
	Prci11g2184	1010	Pfam	NB-ARC domain	160	394	IPR002182	GO:0043531
	Prci11g2184	1010	Gene3D	Ribonuclease Inhibitor	502	731	IPR032675	-
	Prci11g2184	1010	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	146	409	IPR027417	-
	Prci11g2184	1010	FunFam	Probable disease resistance protein At5g66910	307	393	-	-
	Prci11g2184	1010	Gene3D	Ribonuclease Inhibitor	775	950	IPR032675	-
	Prci11g2184	1010	Gene3D	-	148	307	IPR027417	-
	Prci11g2184	1010	FunFam	Probable disease resistance protein At1g61300	148	302	-	-
	Prci11g2184	1010	Gene3D	-	394	481	IPR036388	-
	Prci11g2184	1010	Pfam	Leucine rich repeat	530	587	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g2184	Prci-Chr11	21280453	21284886	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g2184	175	488	WRKY Transcription Factor Family	AT5G45050	27.812	1.29e-15	80.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g2184	K13459		-	pcin:129285546	1975.29