Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2172 ATGGAAGTTGTTGCAAGTGTGACAAGCATCATAGGCTTGTGTTGCTCATTGCATGAAGTAGTTAGAACAAAGTACAAGCACTTGAGAACACCCACGAGGAGTATTCGGCAGCTGAATAATTTGATGCATAGGCTGATTGCTCGCGCAAGAGGTGTTGAACATGAAATAAACCAACTGCAGCATCTAATGGGGGCAGAATCAACAAATTTCTGTAATACATGGCTTAAGCAAGTTGATCAGGTAGAAAGAGAAGTGTGCAACCTCGTGGATGAAAATGGCCCGCATAGGCAAATTAAAGGATGCTGTTTTATTTGTTCAAGAATCAAGTTAGGGGAACTTGTTGAAGAGAAGATCCAAGATATTCGTGAACTTCTAGAGACTGTTCCAGATTCAAAGGATATTGCTATTCCTGTAAGCAGAAGAGGTGATATTTTGCCTACAACGCCAATGATGGAAAACCAAACACACAAACTTACTTTTATGAGGATTTGGGAGTTCTTGTTTGATAGGAATGCCAGAAGGATTGGTGTCTGGGGAATGGGAGGAGTAGGCAAGACAACTATTATGTTAGCAATTAACAATAGCCTGTTGAATAATAGTAGCGAATTTAACTGTTATTTGGGTGGAGATATAGCTGTGAAGTTGAATTTGACTTTTAAAGAAACTGATGATGAAAGAATAAGAGCCTTAAAATTGTTTCATACTTTTAAAAGAAGGAATAAATTTACACTGATTTTAGATGATGTCTGGGAACCAGTCAATCTTGAAAATGTTGGAATCCCTGTGCCAACAGTAAAGAATTGTTGTAAATTAGTGATAATAACTCGAAACATTAGAGTGTGCAGAGAGATGGAAACAGACAAAAATGTGGAAGTGAAAGTTCTTTTAGAAGAAGAAGCATGGAATCTCTTCAAGGACAAAGCTGGGGAACAAGTGCTATCAAATCCAAATATAAAATCAATTGCAATGGATGTGGCAAAAGAATGTGGTGGTTTGCCTCTAGCTATTGTTGCAGTTGGACGTGCATTGAGAGACACCACTAACATGAGAGAGTGGGAGAATGCATTGGAAGAGTTAAGAACTTCAAGTATTGATACATACAACATTTATGAAGTAGTATGTTCTCGTTTGAAGTTGAGCTATTCAAAACTAAAGGATGATACAAGGCGACATTGCTTTCTGTATTGTGGTTTATACCCAAAAGGTCACCTAATTGAGGAGAATGAATTGATTAATTATTGGGTGTGGGAAGATTTATTGCAAGGTCCAAGCACGTCTGTTATGAAACGAAAGGGGCAAATGATTATAGATGAACTAATATCAGCGTGCTTGCTGGAATTGAAGATTGAAAATGGGGTGAGATTTGTTAAATTGCATGATATGGTAAGAGATATGGCCATCCCAATCTTGAGTACAAAGCCTAGATGCATTGTGAATGCTGGCATCGGACGAGTAAAGCCACCAATACCTCCGGAATGGAGAGAGGATGTTGAATGGGTATCGTTGACGAGAAATGATGTGAAATCTATAGACTTCAGTCCAATGTGTCCTAGACTCACTTCTTTGCTGCTTCAATACAACTCATTTGAAGAAGACATATCACACCACTTCTTTGACAACATGCATGGGCTAAAAGTTCTTAATCTCTCCTATACTGGGATTAGTGTTTTGCCGGTGTCTCTTTCAAATTTGGAGAATCTACATGCCTTGTTGTTGAGCCACTGTTGGAATCTTGATAAAGTTCCATCCTTAGAAAGGCTCACTAAATTGAACTACTTAGATTTTTCATTGTCTAGAGGTTTAACAGAACTTCCACAGGGGATGGAACAATTGACTTATTTGAGACACCTAGATTTCTCCTACACGTCTATCCAAAACTTACCAGCTGGACTCGTATCCAAATTTACTCTTCTGGAGGGCTTGTTGATGTTGGGTTCTCCTATGATTGGGGTATCATCTGTGAGAGCAAATCGCACCTTGTATCCAGTGATAGTGGAAGAAATCATATCCTGTCGTAATCTGTCTCTTCTACACATGCAATTCCTTGACTTTGAAGACTATCGGGAATTTGCTAAATTAATGAAGTATTATCAATTAAAGGAGTTGAAGCTTCTTGTCGGCTTTTCAGAATCAGCGCTTCTAGAATTGTCTGAGAAAACTAGTTTGGCAATATGTGGGGGATACGAACGAAGCAATGTTTCAGAAGACGAGATTACTGCATTGATTCCACGAAATGTAGAGGAGTTAATAATATCTCAATTTGTCGGTATGAAATGCTTGTCTTTGCACTTATGGAATGCAATGTACTTGAAAAGGTGCCAAGTAAAATGGTGTCCTGATTTGGAATGCATTTTTGAATCAGAGGAGAATAATTTGTCTCGGCTAGAGACAATGCATCTGAGTCATTTGCCAAAGTTGAGGATGATCTGTGGGAAAGTGGTGAGACCATGTACTCTAATGAACCTCAAGAGTATTCATGTGTTTAAATGTAATTCGTTGAAATGTCTGTTCCCAAGGCAGCTCATGGACGAGCTTAAAAGTCTGGAAGAAGTTATCATCATCAATTTCTGGTATATGGAAGAAATTATTGAAGGGGAGAGGAATACAAACGCTGAAGACAGCAGCCAAGCAGCCAAAGTGTTCCTTCCAAAATTGCAAAGGTTGGAATTGTATCATTTGTCAAGTCTGAAAAGCATATACAAAGGGAACATTCAATGTAATTCTCTACGCGCTATTGCAGTTGTGGGCCGCAATGCTCTGAAGAAGTTGCCTTTGGGTCTGTTTGGAGTAGAGGCTGGTCAGCAAATCTCACTATCAACCACTCTCCAACAAATATTATGTCACAATGAATGGTGGCAATCGCTGCAATGGGACCAACCTGAAGCCAAGAATCTCCTTCAATCATACTTTGTCGATTGCGATAAGCGTAATGTGGCATGGAGACATGCAGGGACGAGTTTGCTCCGAGCAGCAGTAATATACCGTGAAGGCAGTATTCTAATGGAACGAGCCACAATATCTTGA 3024 0.3935 MEVVASVTSIIGLCCSLHEVVRTKYKHLRTPTRSIRQLNNLMHRLIARARGVEHEINQLQHLMGAESTNFCNTWLKQVDQVEREVCNLVDENGPHRQIKGCCFICSRIKLGELVEEKIQDIRELLETVPDSKDIAIPVSRRGDILPTTPMMENQTHKLTFMRIWEFLFDRNARRIGVWGMGGVGKTTIMLAINNSLLNNSSEFNCYLGGDIAVKLNLTFKETDDERIRALKLFHTFKRRNKFTLILDDVWEPVNLENVGIPVPTVKNCCKLVIITRNIRVCREMETDKNVEVKVLLEEEAWNLFKDKAGEQVLSNPNIKSIAMDVAKECGGLPLAIVAVGRALRDTTNMREWENALEELRTSSIDTYNIYEVVCSRLKLSYSKLKDDTRRHCFLYCGLYPKGHLIEENELINYWVWEDLLQGPSTSVMKRKGQMIIDELISACLLELKIENGVRFVKLHDMVRDMAIPILSTKPRCIVNAGIGRVKPPIPPEWREDVEWVSLTRNDVKSIDFSPMCPRLTSLLLQYNSFEEDISHHFFDNMHGLKVLNLSYTGISVLPVSLSNLENLHALLLSHCWNLDKVPSLERLTKLNYLDFSLSRGLTELPQGMEQLTYLRHLDFSYTSIQNLPAGLVSKFTLLEGLLMLGSPMIGVSSVRANRTLYPVIVEEIISCRNLSLLHMQFLDFEDYREFAKLMKYYQLKELKLLVGFSESALLELSEKTSLAICGGYERSNVSEDEITALIPRNVEELIISQFVGMKCLSLHLWNAMYLKRCQVKWCPDLECIFESEENNLSRLETMHLSHLPKLRMICGKVVRPCTLMNLKSIHVFKCNSLKCLFPRQLMDELKSLEEVIIINFWYMEEIIEGERNTNAEDSSQAAKVFLPKLQRLELYHLSSLKSIYKGNIQCNSLRAIAVVGRNALKKLPLGLFGVEAGQQISLSTTLQQILCHNEWWQSLQWDQPEAKNLLQSYFVDCDKRNVAWRHAGTSLLRAAVIYREGSILMERATIS 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2172 1007 Pfam NB-ARC domain 161 382 IPR002182 GO:0043531
Prci11g2172 1007 Gene3D Ribonuclease Inhibitor 492 726 IPR032675 -
Prci11g2172 1007 Gene3D - 381 467 IPR036388 -
Prci11g2172 1007 SUPERFAMILY L domain-like 454 955 - -
Prci11g2172 1007 FunFam Probable disease resistance protein At1g63360 381 468 - -
Prci11g2172 1007 Pfam Leucine rich repeat 517 575 IPR001611 GO:0005515
Prci11g2172 1007 Coils Coil 35 55 - -
Prci11g2172 1007 PRINTS Disease resistance protein signature 236 250 - -
Prci11g2172 1007 PRINTS Disease resistance protein signature 174 189 - -
Prci11g2172 1007 PRINTS Disease resistance protein signature 329 343 - -
Prci11g2172 1007 PRINTS Disease resistance protein signature 562 578 - -
Prci11g2172 1007 Gene3D - 294 380 IPR042197 -
Prci11g2172 1007 Gene3D Ribonuclease Inhibitor 732 950 IPR032675 -
Prci11g2172 1007 Gene3D - 140 292 IPR027417 -
Prci11g2172 1007 FunFam Probable disease resistance protein At5g66910 294 380 - -
Prci11g2172 1007 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 923 - -
Prci11g2172 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 396 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2172 Prci-Chr11 21208422 21216691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2172 171 582 WRKY Transcription Factor Family AT5G45050 23.898 2.26e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2172 K13459 - pcin:129285546 1371.68