LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g2169	ATGGAAGTTGTTCCCAGTGTGTTAAACATCATAGGCTCGTGTTGCTCATTGCATGAAGTCGTTAGAACAAAGCATAAACACTTGAGAACACTCAAAAGGAGTATTCGGCAGATGAATAATTTGATGCAAAGGCTGGATGCTCATGAAAGGGATGTTGAACATGAAATAAACCAATTGCGGGCGGAATCAACAAATGTGTGTAGTACATGGCGTGAGCAAGTTGGTCAGGTAAGAAGTGAAGTGCGCAATCTCATGGATGAAAATGGCCGGCTTAGACAAACTAAATGGTTCAGTTTTATTTGTTCAAGAATCAAGTTAGGGGAACTTGTTGAGGAGAAGATCCGAGATATTCGTGAACTTATAGAGACTGTTCCAGATTTAAAGGATGTTGCTATTCCTGTAGGCAAAAGAGGTGATATTTTGTCTGCAACGCCAATGATGGGATGCGAAACACACAAGCAAATATTTATGAAGATCCGGGGATTCTTGTCTGATGAGAATGTTAGAAGGATTGGTATTTGTGGTTTGGGAGGAGCCGGTAAAACAACTATTATGTCAGAAATTAACAATCACCTGTTGAATAATAGCAATGAGTTTAACTGCATTATTTGGGCGGAAGCATCAAAGGATCTAGAGAAGTTGCAACAAGATATAGCTGTGAAGTTGGATTTGACTTTTCAAGAAGCTGATGATGAAATAACAAGAGCCTCAAAATTGTTAGAAGCTTTTAATAGGAGGAAGAAATTTACACTGATTTTAGATGATGTTTGGGAACCATTCACTATTGAAAGTGTTGGAATCCCTGTGCCAACAGTAGAGAATGGTTGTAAATTGGTGATTATAACTCGAGACGTTAGAGTGTGCAGAGGTATGGAAACAGACAAAGATGTGGAAGTGGAAGTTCTTTCAGAAGAAGAAGCATGGGATCTCTTCAAGGACAAAGTTGGGGAACAAGTGCTATCAAATGCAAATATACAATCAATTGCCAGGGAGGTGGCAAAAGAATGTGGTGGTTTGCCTCTAGCTATTGTTGCAGTTGGACGTGCATTGAGAAACACAACTAACATAAGAGAGTGGGAGAATGCATTGGCAGAGTTAAGAACTTCAAGTACTGGCATACACACTATTGATGAAGTGGTGTGTTCTCGTTTGAAGTTGAGCTATTCAAAACTAAAGGATGATGCAAGGCGATCGTGCTTTCTATATTGTTCCTTATACCCAAGAGGTCACCTAATTGATGAGAATGAATTGATTAATTATTGGGTATGGGAAGATTTATTGGAAGGTCCAAACACGTCTGTGATGAAACGAAAGGGGCAAATGATTATAGATGAACTAATATCAGGATGCTTGCTGGAATCGAAGACTGAAAATGGGGTGAGATTTGTTAAATTGCATCATGTGGTAAGAGACATGGCAATCACAATCATGAGTACAAAGCCTAGATGCGTTGTGAATGCTGGCAAGGAACAAGTAAAACCAGCAATACCTCAAGAATGGAGAGAGGATGTGCAATGGGTATCGTTGATGAGAAATGATGTGAAATCTATAGACTTCAGTCCAACGTGTCCTAGACTCACTTCTTTGCTACTTCAATACAACTCATTTGAAGAAAACATATCGCACCACTTCTTTGACAACATGCATGGGCTAAAAGTTCTTAATCTCTCCTATACTGGGATTCATGTTTTGCCGGCGTCTCTTTCGAATTTGGAGAATCTACATGCCTTGTTGTTGAGCCACTGTTGGAATCTTGTTGAAGTTCCATCCTTAGAAAGGCTCACTAAATTGAAGTATTTAGATTTTTCATTTTCTAGAAAGTTAATAGAACTTCCACCGGGGATGGAACAATTGACTGATTTGAGACACTTGGATTTCTCCTTCACATCTGTCCAAAACTTACAAGCTGGACTCATATCCAAATTTACTCTTCTGGAGGGCTTGTTGATGTTGGGTACGCATATGATTGGAGTATCATCTGAGAGCGAAGTACGCCCTTTGTTTGCAGTGTCAGTGGAAGAAATCATATCCTGTCGTAATCTGTCTCTTCTACACATGCAATTCCTTGACTTTGAAGATTATCGAAAATTTGCTGAATTTTTGAATTATTCTCAATTAAAGGAGTCGAAGCTTGTTGTCGGGTTTTCAGTTGTTCCAAAATTATCTGAGAAAAATTGTTTGGCAATAAGTAGGAGAGGCAAAGGAAGAGATGTTTCAGAAGCCCAGACTACTGCATTGATTCCACGAAATGTAGAGGAGTTAATAATTTCTAAGTTTGATGGTATGGAACGCGTTCTTGAATCCGAGGAGAATAATTTGCCCCAGCGACAGCCAATGAATCTACTACATCATATTCCAAGGTTGAGGAGCATGTTGAGATCAGGTACTCTGATGAACCTCAAGAGAATTGAGGTGTCAGTCTGTTGTTCGTTGAAATGTCTGTTCCCGAGGCAGCTCGTGGACGAGCTTAAAAGTCTGGAAGAAATTGTCATCGAATGGTGCTTCGCGATGGAAGAAATTATTGAAGGAGAGAGGAATGCAAGCGCTGAAAACAGCAGCCATGCTGCCAAAGTGATCCTTCCGAAATTGCAAAGGTTGAAATTGAAGGAGTTGCCAAGACTGAAAAGCATATACAAAGGGGACATTGAATGCAATTCTCTACGCACTATTGAAGTTGTGGGCTGCATTGCTCTGATGAAGTTGCCTCTGGGTTTGTTTGGAGTAGAGGCTGGTCAGCAAATCTCACCATCAACCACTCTCCAAGAAATAATATGTGAAAACGAATGGTGGCAATCACTGCAGTGGGACCAACCTGAAGCTGAGAATCTCCTTCGACCACGCTTAGTCGGTTACTATGACAGTGGTCTGGCGTGGAGGCATGCATCCATGGACAGGTTTGCTCCGAGCAGCAGTAATACAGTGTGA	2925	0.4068	MEVVPSVLNIIGSCCSLHEVVRTKHKHLRTLKRSIRQMNNLMQRLDAHERDVEHEINQLRAESTNVCSTWREQVGQVRSEVRNLMDENGRLRQTKWFSFICSRIKLGELVEEKIRDIRELIETVPDLKDVAIPVGKRGDILSATPMMGCETHKQIFMKIRGFLSDENVRRIGICGLGGAGKTTIMSEINNHLLNNSNEFNCIIWAEASKDLEKLQQDIAVKLDLTFQEADDEITRASKLLEAFNRRKKFTLILDDVWEPFTIESVGIPVPTVENGCKLVIITRDVRVCRGMETDKDVEVEVLSEEEAWDLFKDKVGEQVLSNANIQSIAREVAKECGGLPLAIVAVGRALRNTTNIREWENALAELRTSSTGIHTIDEVVCSRLKLSYSKLKDDARRSCFLYCSLYPRGHLIDENELINYWVWEDLLEGPNTSVMKRKGQMIIDELISGCLLESKTENGVRFVKLHHVVRDMAITIMSTKPRCVVNAGKEQVKPAIPQEWREDVQWVSLMRNDVKSIDFSPTCPRLTSLLLQYNSFEENISHHFFDNMHGLKVLNLSYTGIHVLPASLSNLENLHALLLSHCWNLVEVPSLERLTKLKYLDFSFSRKLIELPPGMEQLTDLRHLDFSFTSVQNLQAGLISKFTLLEGLLMLGTHMIGVSSESEVRPLFAVSVEEIISCRNLSLLHMQFLDFEDYRKFAEFLNYSQLKESKLVVGFSVVPKLSEKNCLAISRRGKGRDVSEAQTTALIPRNVEELIISKFDGMERVLESEENNLPQRQPMNLLHHIPRLRSMLRSGTLMNLKRIEVSVCCSLKCLFPRQLVDELKSLEEIVIEWCFAMEEIIEGERNASAENSSHAAKVILPKLQRLKLKELPRLKSIYKGDIECNSLRTIEVVGCIALMKLPLGLFGVEAGQQISPSTTLQEIICENEWWQSLQWDQPEAENLLRPRLVGYYDSGLAWRHASMDRFAPSSSNTV	974

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g2169	974	Gene3D	-	136	299	IPR027417	-
	Prci11g2169	974	FunFam	Probable disease resistance protein At1g61300	139	296	-	-
	Prci11g2169	974	Gene3D	Ribonuclease Inhibitor	744	924	IPR032675	-
	Prci11g2169	974	FunFam	Probable disease resistance protein At1g63360	388	475	-	-
	Prci11g2169	974	Coils	Coil	28	62	-	-
	Prci11g2169	974	Gene3D	-	301	387	IPR042197	-
	Prci11g2169	974	Coils	Coil	226	246	-	-
	Prci11g2169	974	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	29	901	-	-
	Prci11g2169	974	SUPERFAMILY	L domain-like	492	906	-	-
	Prci11g2169	974	Gene3D	Ribonuclease Inhibitor	486	731	IPR032675	-
	Prci11g2169	974	FunFam	Probable disease resistance protein At5g66910	301	387	-	-
	Prci11g2169	974	PRINTS	Disease resistance protein signature	336	350	-	-
	Prci11g2169	974	PRINTS	Disease resistance protein signature	243	257	-	-
	Prci11g2169	974	PRINTS	Disease resistance protein signature	592	608	-	-
	Prci11g2169	974	PRINTS	Disease resistance protein signature	170	185	-	-
	Prci11g2169	974	Pfam	Leucine rich repeat	524	582	IPR001611	GO:0005515
	Prci11g2169	974	Pfam	NB-ARC domain	157	389	IPR002182	GO:0043531
	Prci11g2169	974	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	151	403	IPR027417	-
	Prci11g2169	974	Gene3D	-	388	475	IPR036388	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g2169	Prci-Chr11	21159619	21164417	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g2169	167	627	WRKY Transcription Factor Family	AT5G45050	24.131	2.35e-15	79.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g2169	K13459		-	pcin:129285546	1385.93