Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2168 ATGAATAATGCAGATCGAAGCCTTTTGCTTCTTCTTTTTGCTGCTGCGTTCACTTCCATTCTCCTTCTCAATTGCTTCACAGAAGCTGCAGCTGATAGCAGTAATGGAATCAATTTTGATGTTGGTGCAATTCTTGATGTTGATTCTCCATCTGGAAAACAACAGAAAGCAGCCATGGAAATTGCAGCCCAAAACTTCAATAACCATTCAAAGAGTCTCAACATATCCCTCCATTTTCGTCACTCTCTAAGAAATCCATTGCAGGCGGCTTCAGCTGCTGAGGAGCTTATAAACAAGACGAAAGTGAAAGTTATAATTGGAATGGAGGCCTGGCAGGAAGCATCTTTTGTAGCCGATCTTGGAGACAAAGCTCACGTTCCAGTAATTTCATTCTCACCTCCTTCAATATCTTCACCATCTTCATCAATTCCATTTCGTTGGCCTTTCTTGATTCAAATGGCCAAGAACCAGACTGCAAATATGAACTGCATATCTGATATTGTTCATGCATATAACTGGCAAAAGGTTATAGTCATATATGAAGATGATTCTTATAGTACTGACTCAAGCATGCTAACCCTCCTTTCTGAATTCCTCTTGAAGACTAATTCCCAAATTGAGCGCAGGCTTTTCCTTCCACCATTTTCTTCTTTACCTGATCCAAAAGGGTATGTTCTTGATGAACTGATTAAGCTATTATTATCAGCACAATCTAGGGTTTTCATTGTTCTCAAAGCATCATTGCCCATGGTGACTCATTTGTTTAGAGAAGCTAAGAAACTAGGGTTCTTAGGGAAAGAATCGGCTTGGATTATCAATGAGGACATTGCTGGAATGCTGGACTTAGTCAATGAGACTGTCTTATCGTCCATGGAAGGTACTATTGGAATCAAAAGCTACTATTCTACAAGTTCACGTGCTTATACTCATTTCACAGAAAAATTTCAAAACCAGTCTCATCCCGGATTGTATGCCCTGCAAGCTTATGATAGCATGACGATCATCACAAAAGCCCTAGAGAAGATGAGTGGTACTAATAACACTTATAACTCAAGGGCTTTGTTGAACTCAATGCTATCTAGCAACTTCTCTGGTTTAACTGGTAACATAGGGTTCGACGAAGGCCATTTGTCACAGACTCCATTGTTAAGAGTGATAAATGTGGTTAACAAGAAATACACAGAACTGGACTTTTGGGTACCAAACTTGAAGTTCTTTAAATCTTTGGAAGACATAGAGAAAGGAAGTGAAGCTGCTACAAATAATCTTAGTGGTCCACTGGTTTGGCCTGGAGGTCAGAAGAATCTAAACAATAATGATGATGCTACTTTTCCAACAGGATGGACCATGCCTTCGGATGTAAGTCCTCTGAAAGTAGCAATTCCTACAAATCCTGCTTTTGAAAATTATGTGAAGGAAGAGTCTCCTGGGAAATATAGTGGCCTTTGTATTGATCTTTTTGAAACGATTCAAGAACAGATCAAACATCGGTACTCTGGTCTGCCATATAAATATTACCCCTTCGATGTATCTTATGATGTGCTTATACAGAGTGTTGCCAACGAGTCCTATGATGCTGTTGTTGGAGACGTAACGATACTTGAAGGTCGATCCAAGAATGTATCTTTCACACAGCCATACACAGACTCAGGCCTTTCACTCATATTTCCAGCAGAGAGGGAAGGGACGACATTTCTGTTCGTGAAGCCATTTAGCTGGCAAATGTGGTTGGCCACTGCTGCTATCTTCTTCTACACAACGCTTGCCATCTGGCTCTTGGAGCGTCCCTTAAACCCTTACTATAAAGAAGGATCAACGAAAACTCAATTCAGCAGCACAATTTGGTTCGCCTTTTCTTCTCTATTTTTCGCTCACGGGGATAAACCGCACGGGAACTCAGCAAGAGCGGTGGTTGCTGTATGGTTATTTCTGGTTTTTGTTCTGACTTCAAGCTACACTGCAAATCTGTCTTCTATGCTCACTGTAAAACGCATGAATAATGAGAGAGACATTCAGTGGCTGAAGCAAAATAAGTTAACGGTTGGCTGTGATAATAGCAGTCAATTTGTGAAGAACTACCTGCTCAATGTGTATGGATTCCCCAGAGACCAGATTAGAGATCTTGATGGTGAACCTGACTTTGTGGCCAAGTTTAAAAGCAAAGAAATTTCTGCTCTCTTTCTTGAGAGCCCATATGAGAAGGTTTTCCTAAGCAAGTATTGCAACGAATATACTGCAATTTCTGTTAGCTATAAATTTGGAGGCCTTGGCTTTGTATTCCAAAGAAACTCTCCCTTGGTGAAAGACTTCTCAGAAGGAATTTTAAGGCTAGCAGAAAATGGAACTCTCAAGAGTATGGAAGACAAATGGTTGACTCCTTCCAATAATTGCTCAAGCGACTCAACGTCGTCAACTTCTGAAGTTGAAAGCCTGACCCTTGCTGACTTTTGGATTCTCTATGTGATAAGTGGTCTCACTTCCACCATCTTCTTGATCGTGGCTCTGTTGGGGACTTGCCATCATCAAGAAAGAGGAGCGGGTCAAGACATTAATGTAGAAGTTTCTGATGATAATGGTGTTTTGAACAGGACACTTGGGAGACTCGCCACAGGCATTTACAACAATATTGGCAGTTTCAATTTCAAAAATTTAGGAAGAGCTGCAACATTTGGTGGAACACAAACTGTTCGCCATCGGAATTCTTCGAGGTGGGAGAGTGTAAGGACTTCCGGTGATTATGTTAATCCTCGACGGACCCAATCGGTTGGCTTAGAAATGTTATAA 2784 0.4095 MNNADRSLLLLLFAAAFTSILLLNCFTEAAADSSNGINFDVGAILDVDSPSGKQQKAAMEIAAQNFNNHSKSLNISLHFRHSLRNPLQAASAAEELINKTKVKVIIGMEAWQEASFVADLGDKAHVPVISFSPPSISSPSSSIPFRWPFLIQMAKNQTANMNCISDIVHAYNWQKVIVIYEDDSYSTDSSMLTLLSEFLLKTNSQIERRLFLPPFSSLPDPKGYVLDELIKLLLSAQSRVFIVLKASLPMVTHLFREAKKLGFLGKESAWIINEDIAGMLDLVNETVLSSMEGTIGIKSYYSTSSRAYTHFTEKFQNQSHPGLYALQAYDSMTIITKALEKMSGTNNTYNSRALLNSMLSSNFSGLTGNIGFDEGHLSQTPLLRVINVVNKKYTELDFWVPNLKFFKSLEDIEKGSEAATNNLSGPLVWPGGQKNLNNNDDATFPTGWTMPSDVSPLKVAIPTNPAFENYVKEESPGKYSGLCIDLFETIQEQIKHRYSGLPYKYYPFDVSYDVLIQSVANESYDAVVGDVTILEGRSKNVSFTQPYTDSGLSLIFPAEREGTTFLFVKPFSWQMWLATAAIFFYTTLAIWLLERPLNPYYKEGSTKTQFSSTIWFAFSSLFFAHGDKPHGNSARAVVAVWLFLVFVLTSSYTANLSSMLTVKRMNNERDIQWLKQNKLTVGCDNSSQFVKNYLLNVYGFPRDQIRDLDGEPDFVAKFKSKEISALFLESPYEKVFLSKYCNEYTAISVSYKFGGLGFVFQRNSPLVKDFSEGILRLAENGTLKSMEDKWLTPSNNCSSDSTSSTSEVESLTLADFWILYVISGLTSTIFLIVALLGTCHHQERGAGQDINVEVSDDNGVLNRTLGRLATGIYNNIGSFNFNXNLGRAATFGGTQTVRHRNSSRWESVRTSGDYVNPRRTQSVGLEML 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2168 928 SMART GluR_14 458 793 IPR001320 GO:0015276|GO:0016020
Prci11g2168 928 SUPERFAMILY Periplasmic binding protein-like I 38 434 IPR028082 -
Prci11g2168 928 FunFam Glutamate receptor 160 323 - -
Prci11g2168 928 Pfam Bacterial extracellular solute-binding proteins, family 3 457 792 IPR001638 -
Prci11g2168 928 Gene3D - 755 790 - -
Prci11g2168 928 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 842 IPR015683 -
Prci11g2168 928 Pfam Ligand-gated ion channel 793 824 IPR001320 GO:0015276|GO:0016020
Prci11g2168 928 Gene3D - 717 754 - -
Prci11g2168 928 SUPERFAMILY Periplasmic binding protein-like II 445 792 - -
Prci11g2168 928 FunFam Glutamate receptor 564 703 - -
Prci11g2168 928 PIRSF IGluLR_plant 9 870 IPR017103 -
Prci11g2168 928 Gene3D - 453 563 - -
Prci11g2168 928 Pfam Receptor family ligand binding region 55 388 IPR001828 -
Prci11g2168 928 CDD PBP1_GABAb_receptor_plant 40 409 IPR044440 -
Prci11g2168 928 Gene3D - 156 399 - -
Prci11g2168 928 Gene3D - 47 380 - -
Prci11g2168 928 Gene3D - 564 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2168 Prci-Chr11 21097261 21106972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2168 10 833 Ion Channels AT2G29120 30.230 1.61e-113 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2168 - - pcin:129285797 1770.75