Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2167 ATGTTGTCACTCCTTTCTGAGGCCCTCCAAGACTTTGGTTCACTAATCGAGCACCGTTTAGCTCTTCCACCAATATCTGTTTTATCAGATCCAGGAGGGCTAATCAATGAAGAGCTGATAAAGTTGGCAAATATAACTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTGGAAATGGTGACACATTTGTTCAGAGAAGGTTCGAGGATGGGACTTGTGGATAGAGAAACAGCTTGGATACTCCCAGAGAGCGTAACTAATTTTCTTGAATCTGTGGATAAGTCTGTCATTTCCTCTTATATGGGAGGATCTTTAGGAATCAAGACTCACTGCTCACACAATAGCAGTGAATATCATGACTTTCGAGCTCGGTTCCGACAAAGTTTTCGTGCAAAGAATCCTGAGGAAGATAATAGCAACCCAGGATTTTATGCTTTGCAAGCACGTGATAGCATCAAACTTGTCATTCAAGCAGTAGAAAGAACAGCAAGTGACAAAAGAAGTAGCCCAGAGGCCATGCTAAGAGAAATATTGTCTAGCAATTTCCTTGGTTTAAGTGGGCAAATTCATTTTGAAGCAGGTGCGCTCTTGCAGAATCCTATCCTAAGGATAGTTAATGTAGTTGGGAAGAGTTATAAAGAAATAGATTTTTGGACTCAAGAAAATGGGTTCACCACAAGCCTGCCTACAAGAAAAAGTGAAGAAAATGCTACTGCTGACACACACAGTTTGGATGGGGTTGAACGATGGCCAGGGAATTCCGAGAGGGTTCCAAAAGGTTGGAATATGCCTACAAAGAGAAAGCCATTGAAAATTGCAGTGCCGGGAAGAGCTTCATTTTCCAAGTTTGTCAAAGTAGACTATGGAAAGAATCCTAAGGGATTCTGCATTGATATATTCACAAAGGCTCTTGGACTTTTGGATTATGATCTTCCCTACGAGTTCCACCCTCGCAATGTAACTTATCCTGATCTGATTCAACTGGTGTACAACAAGACTTATGACGCAATGGTTGGAGACATGACTTTACTGGCAGAGAGACTGCAATATGTGGATTTTACTGTGCCATATACAGAATCAGGATTGTCAATGATAGTTCCAGTGAAGTCTGAAGACTCAACATGGATGTTTTTGAAGCCCTTCACCTGGAAAGTGTGGGTGGTTACTGGTACCATCTTGATTTACACAATGTTAGTAGTTTGGTACCTTGAACGAGCACCTAATCCAGAGTTTCATGGCAATTGGAAGGACCAGTTTAGTACTGCTTTTTGGTTTACCTTCTCCTCTCTATTCTTTGCCCATAGGGAGCAAATGCATAGCAACTTATCTCGTATGGTGATGGGAGCATGGCTGCTTCTAGTTATGGTTCTAAACTCAAGCTACACAGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTGAGGCCAAATGTCACAAGCATCGAGTGGCTGAAGATGAACAACATGAAAATTGGCTGTGATGGTGACTCATTTATCAGGACATACCTACAGAAAGTTGAAAAGTTCAAGCCAGAAAACATCATCACTGTAAATAGTGAGAACTATTATGACAGCAATTTCAAAAACAACTCGATCGCAGCCGCTTTTCTTGAACTCCCTTATGCAAAAGTGTTCATGAGTAAATACTGTAAGGGATACTCTAGTACCAAGCCCGCCACCAGATTTGGAGGACTAGGCTTTGTGTTCCAGAAAGGCTCTCCAGTGGCCAAAGATATTTCTAAAGCAATATTGCAACTGTCAGAGCAAGGAGAACTGACCAACTTGGAAGCAAATTGGTTATATAGCTCAAAAGATTGCTCTAACAACACAGATTCTAATGATACACAGAGTTTAAAGCTTGGAAGTTTCTGGGTTCTCTTTGTCATTTCTGGGGTCACATCTACCATTTGCTTGCTATTTTCTATCATCCAGTCATTAGGCTTTTTTCGTAGCCCTCAAAATGTGGCTGAAGAAGGTCATAATGAACCCACAAGTGATACTAGAACTAGAGTTTGGTTAAGAGCTATTGAATTGGCTAAGCAGATTTACAGCAGAAAGCTTATTAAGGAACCTGGGCCCACAAGTGAGGCACAACAAGATGTAACTAATTGTTCTTCTAGATGGGACTGTGTCAGTGCCATTGAACAAGGTTCTACATCACCAGTGTCAACATTAACTGTGCTCTGTCTCTCTACCACACGAAACACAAATGGGAACTCTTGA 2226 0.4124 MLSLLSEALQDFGSLIEHRLALPPISVLSDPGGLINEELIKLANITQSRVFIVLHSSLEMVTHLFREGSRMGLVDRETAWILPESVTNFLESVDKSVISSYMGGSLGIKTHCSHNSSEYHDFRARFRQSFRAKNPEEDNSNPGFYALQARDSIKLVIQAVERTASDKRSSPEAMLREILSSNFLGLSGQIHFEAGALLQNPILRIVNVVGKSYKEIDFWTQENGFTTSLPTRKSEENATADTHSLDGVERWPGNSERVPKGWNMPTKRKPLKIAVPGRASFSKFVKVDYGKNPKGFCIDIFTKALGLLDYDLPYEFHPRNVTYPDLIQLVYNKTYDAMVGDMTLLAERLQYVDFTVPYTESGLSMIVPVKSEDSTWMFLKPFTWKVWVVTGTILIYTMLVVWYLERAPNPEFHGNWKDQFSTAFWFTFSSLFFAHREQMHSNLSRMVMGAWLLLVMVLNSSYTASLSSMLTVQQLRPNVTSIEWLKMNNMKIGCDGDSFIRTYLQKVEKFKPENIITVNSENYYDSNFKNNSIAAAFLELPYAKVFMSKYCKGYSSTKPATRFGGLGFVFQKGSPVAKDISKAILQLSEQGELTNLEANWLYSSKDCSNNTDSNDTQSLKLGSFWVLFVISGVTSTICLLFSIIQSLGFFRSPQNVAEEGHNEPTSDTRTRVWLRAIELAKQIYSRKLIKEPGPTSEAQQDVTNCSSRWDCVSAIEQGSTSPVSTLTVLCLSTTRNTNGNS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2167 741 Gene3D - 375 515 - -
Prci11g2167 741 CDD GluR_Plant 269 601 - -
Prci11g2167 741 Gene3D - 548 609 - -
Prci11g2167 741 Pfam Receptor family ligand binding region 42 209 IPR001828 -
Prci11g2167 741 MobiDBLite consensus disorder prediction 229 250 - -
Prci11g2167 741 SUPERFAMILY Periplasmic binding protein-like II 253 603 - -
Prci11g2167 741 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 644 IPR015683 -
Prci11g2167 741 FunFam Glutamate receptor 375 513 - -
Prci11g2167 741 Pfam Ligand-gated ion channel 602 633 IPR001320 GO:0015276|GO:0016020
Prci11g2167 741 Gene3D - 1 140 - -
Prci11g2167 741 Gene3D - 163 270 - -
Prci11g2167 741 SUPERFAMILY Periplasmic binding protein-like I 3 262 IPR028082 -
Prci11g2167 741 Gene3D - 271 374 - -
Prci11g2167 741 FunFam Glutamate receptor 266 375 - -
Prci11g2167 741 SMART GluR_14 270 603 IPR001320 GO:0015276|GO:0016020
Prci11g2167 741 Pfam Bacterial extracellular solute-binding proteins, family 3 284 601 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2167 Prci-Chr11 21063401 21066655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2167 1 647 Ion Channels AT2G29120 34.214 6.53e-116 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2167 - - pcin:129285988 1479.15