Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2166 ATGGGGCCTGAAGGGGTTTTTGCCCATTGCATTGGCCCTTTGGTATTCCAAAGAGACTCTCCCTTGGTAAAAGACTTCTCAGAAGGAATTTCACGGCTGGCAGAAAATGGAACTCTCAAGTGTTTGGAAGACCACTGGTTGACACCTCATAAGTGCTCAAGCGACTCAACATCGTCATCTTCTGAAACTGAAAGCCTAACCCTCGCCGACTTTTGGATTCTCTATGTGATAAGTGGTCTCACTTCCACCATCTTCTTGATCGTGGCTCTGTTGAGGACTTACTATGATCAAGAGAAAGAAGGTCAATACATTAATAGCATAGAAGCTTCTGAGAATAATGGTGTCTCGAACAAGACACTTGGAAGATTCGCCGCAGGCATTTACAACAATATTGGCAGTTTGAATTTCAACAATAATGTAGGAAGAGCTGCAACTTTTGGTGGAACACAAACTGTTTGCCATAAGAATTCTTCGAGGTGGGAGAGTGTAAGAACTGATGATGATTATGTTAATCCTCGACGGACCCAATGA 531 0.4313 MGPEGVFAHCIGPLVFQRDSPLVKDFSEGISRLAENGTLKCLEDHWLTPHKCSSDSTSSSSETESLTLADFWILYVISGLTSTIFLIVALLRTYYDQEKEGQYINSIEASENNGVSNKTLGRFAAGIYNNIGSLNFNNNVGRAATFGGTQTVCHKNSSRWESVRTDDDYVNPRRTQ 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2166 176 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 116 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2166 Prci-Chr11 21059593 21060432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2166 7 145 Ion Channels AT2G17260 29.221 1.02e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2166 - K05387 pcin:129286307 349.747