Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2165 ATGAATAATACGGATCGAAGCCTTTTACTTCTTTTTTCTGCTGCGTTCACTTCCATTCTCCTTCTCAATTGCTTCACAGGAGTTGCAGCTGATAGCAGTAATGGTATCAATTTTGATGTTGGAGCAATTCTTGATGTTGATTCTCCATCTGGAAAACAACAGAAAGCAGCCATGGAAATTGCAGCCCAAAGCTTCAATAACTATTCAAAGAGTCTCAACATATCCCTTCATTTTCGTCACTCTCTAAGAAATCCATTGCAGGCAGCTTCGGCTGCTGAGGAGCTCATAAACAAGACGAAAGTGAAGGTTATAATTGGAATGGAGACATGGCCGGAAGCATCTTTTGTAGCAGTTCTTGGAGATAAAGCTCATGTTCCAGTAATTTCATTCTCATCTCCTTCAATATCTTCACCATCTTCATCAATGCCATTTCGTTGGCCTTTCTTGATTCAAATGGCCAAGAACCAGACAGCAAATATGAACTGCATAGCTGATATTGTTCATGCATATAACTGGCAAAAGGTTATAGCAATATATGAAGATGATCCTTATAGTACTGATTCAAGCATGTTAACCCTCCTTTCTGAAGCTCTCTTGAAGACTAATTCCCAAATTGAGCGAAGGCTCATCCTTCCACCATTTTCTTCTTTATCTGATCCAAAAGGGCTTGTTCTTGATGAACTGATAAAGCTATTATTATCAGCACAATCTAGGGTTTTCATTGTTCTCAAAGCATCATTGCCTATGGTGACTCATTTGTTTAGCGAAGCTAAGAAACTAGGGTTCCTAGGGAAAGAATCAGTTTGGATTATCAATGAGGACATTGCTGGAATGCTGGACTTAGTCGACGAGTCTGTCTTATCCTCCATGGAAGGTACTATTGGAATCAAAAGCTACTATTCTACAAGTTCAAGTGCTTATATTCAATTCATAGAAAAATTTCAAAACAAGTCTCAGCCAGGATTGTATGCCCTGCAAGCTTATGATAGCATGAGTATCATCACAAAAGCCCTAGAGAAGATGAGTGACACTAATAACACTTATAACTCAAGGGTTTTGTTGAAGACAATGCTATCTAGCAAATTCTCTGGTTTAACTGGCAACATAGGGTTCAAGGAAGGCCATTTATCACAGACTCCATTGCTAAGAGTGATAAACGTGGTTAACAAGAAATACACAGGCCTGGACTTTTGGGTACCAAACTTGAAGTTCTTTAAGTCTTTGGAAGACATAGAGAAAGGAAGTGAAACTGCTACAAATAATCTGAGTGGTCCAGTGGTTTGGCCAGGAGTTCTAAAGAATCTAAACAATGATGATGATGATGATAATGTTCCAAGAGGATGGAATATACCTTCAGAAGTGAATCCTTTAAAAGTAGCAGTTCCTACAAATCCTGCTTTTGAAAATTATGTGAAGGAAGAGTCTCCTGGGAAATATAGTGGCCTTTGTATTGATCTTTTTGAAAAGATTCAAGAACAGATCAAAGATAGGTATTCTGGTCTGCCATATAAATATTACCCCCTCGATGTATCTTATGATGTGCTTATACAAGGTGTTGCCAACGAGTCCTATGATGCTATTGTTGGAGACGTAACAATACTTGAAGATCGATCTAAGAATGTATCTTTCACACAGCCATACACAGACTCTGGTCTATCACTCATATTTCCAGCTGAGACGGAAGGCACGACGTTTCTGTTTGTGAAGCCATTTAGCTGGCAAATGTGGTTGGCCACTGCTGCTATCTTCTTCTACACAACGCTGGCCATCTGGTTCTTGGAGCATCCCTTAAACCCTTACTATAAAGGAACATGGAAAACTCAACTCAGCAACACAACTTGGTTCGCCTTTTCTTCTCTATTTTTCGCTCACGGGGGTAAATTGTACAGCAACTCAGCAAGAGTGGTGGTTGCTGTATGGCTATTTCTGATTTTTGTTCTGACTTCAAGCTACACTGCAAATCTGTCTTCTATGCTCACTGTAAAACGCATGAATAATGGGAGAGACATTCAGTGGCTGAAGCAAAATAAGTTAACAATTGGCTGTGATAATAGCAGTCAATTTGTGAAGAACTACTTGCTCAATGTGTATGGATTCCCCATAGACCAGATTAGAGATCTTGATGGTGAACATGACTTTGTGGCCAAGTTTAAGAGCAAAGCAATTTCTGCTCTCTTACTTGAGAGCCCATATGAGAAGGTTTTCCTAAGCAAGTACTGCAATGAATATACTGCAATTTCTGCTGGCTATAAATTTGGAGGCCTCGGCTTTGTATTCCAAAGAAATTCTCCCTTGGTGAAAGACTTCTCAGAAGGAATTTTAAGGCTAGCAGAAAATGGAACTCTCAAGAGTTTGGAAGACAAATGGCTGACTCCTTCCAATAATTGCTCAAGCGACTCAACATCGTCATCTTCTGAAACTGAAAGCCTAATCCTCGCTGACTTTTGGATTCTCTATGTGATAAGTGGTCTCACTTCCACCATCTTCTTGATCGTGGCTCTGCTGAGGACTTACTATCATCAAGAGAAAGAAGATCAAGGCATTAATACTATAGAAACTTCTGATGATGATGGTGTTTGGAACAAGACACTTGGGAGATTCGCCACAGGCATTTACGACAGTATTGGCAGTCTCAATTTCAACAATAATATAGGAAGAGCTGCAACCTTTGGCGGAACTCAAAATGTTCGCCATTGGAATTCTTCGCGGTGGGAGAGTGTAAGAACTTCTGATGATTATGTTAATCCTCGACGGACCCAATCAGTAGGATTAGAGATGTTATAA 2784 0.3983 MNNTDRSLLLLFSAAFTSILLLNCFTGVAADSSNGINFDVGAILDVDSPSGKQQKAAMEIAAQSFNNYSKSLNISLHFRHSLRNPLQAASAAEELINKTKVKVIIGMETWPEASFVAVLGDKAHVPVISFSSPSISSPSSSMPFRWPFLIQMAKNQTANMNCIADIVHAYNWQKVIAIYEDDPYSTDSSMLTLLSEALLKTNSQIERRLILPPFSSLSDPKGLVLDELIKLLLSAQSRVFIVLKASLPMVTHLFSEAKKLGFLGKESVWIINEDIAGMLDLVDESVLSSMEGTIGIKSYYSTSSSAYIQFIEKFQNKSQPGLYALQAYDSMSIITKALEKMSDTNNTYNSRVLLKTMLSSKFSGLTGNIGFKEGHLSQTPLLRVINVVNKKYTGLDFWVPNLKFFKSLEDIEKGSETATNNLSGPVVWPGVLKNLNNDDDDDNVPRGWNIPSEVNPLKVAVPTNPAFENYVKEESPGKYSGLCIDLFEKIQEQIKDRYSGLPYKYYPLDVSYDVLIQGVANESYDAIVGDVTILEDRSKNVSFTQPYTDSGLSLIFPAETEGTTFLFVKPFSWQMWLATAAIFFYTTLAIWFLEHPLNPYYKGTWKTQLSNTTWFAFSSLFFAHGGKLYSNSARVVVAVWLFLIFVLTSSYTANLSSMLTVKRMNNGRDIQWLKQNKLTIGCDNSSQFVKNYLLNVYGFPIDQIRDLDGEHDFVAKFKSKAISALLLESPYEKVFLSKYCNEYTAISAGYKFGGLGFVFQRNSPLVKDFSEGILRLAENGTLKSLEDKWLTPSNNCSSDSTSSSSETESLILADFWILYVISGLTSTIFLIVALLRTYYHQEKEDQGINTIETSDDDGVWNKTLGRFATGIYDSIGSLNFNNNIGRAATFGGTQNVRHWNSSRWESVRTSDDYVNPRRTQSVGLEML 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2165 927 SMART GluR_14 458 792 IPR001320 GO:0015276|GO:0016020
Prci11g2165 927 Pfam Bacterial extracellular solute-binding proteins, family 3 457 791 IPR001638 -
Prci11g2165 927 SUPERFAMILY Periplasmic binding protein-like I 37 399 IPR028082 -
Prci11g2165 927 Gene3D - 155 397 - -
Prci11g2165 927 Gene3D - 714 752 - -
Prci11g2165 927 Gene3D - 452 564 - -
Prci11g2165 927 PIRSF IGluLR_plant 9 866 IPR017103 -
Prci11g2165 927 FunFam Glutamate receptor 159 322 - -
Prci11g2165 927 Gene3D - 46 379 - -
Prci11g2165 927 Gene3D - 753 789 - -
Prci11g2165 927 Gene3D - 565 694 - -
Prci11g2165 927 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 853 IPR015683 -
Prci11g2165 927 SUPERFAMILY Periplasmic binding protein-like II 445 791 - -
Prci11g2165 927 Pfam Ligand-gated ion channel 792 823 IPR001320 GO:0015276|GO:0016020
Prci11g2165 927 FunFam Glutamate receptor 564 694 - -
Prci11g2165 927 CDD PBP1_GABAb_receptor_plant 39 408 IPR044440 -
Prci11g2165 927 Pfam Receptor family ligand binding region 54 387 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2165 Prci-Chr11 20908939 20916707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2165 2 842 Ion Channels AT2G29120 30.926 2.50e-119 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2165 - - pcin:129285797 1544.25