Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2162 ATGTTTGAAGAAGCAGGACTCCTCACATCAAGAATGGGTTCATGCAATTGTTTTAAGACAATGATTTGCTTAGGAAAGTCAAAAGGTAGTTCAAAGAAAGCAAAGGGAGATCTACCTTCAGGGAAACTCAGTGCAGTGGAGTCAAACAATCACAGAGGAAAAGGTTTTAGTGGTGTAGAGAATGGTATTAAAAGTGAAAGTCTGGTGTTACCTGGGGTCTCAGTTGAAACAATTGCTGCAACAAAAATCCAAACAGCATATCGGGCTTATAAGGCAAGAAAATCTCTGCGTCGTTTGAAAGGGTTTGCAAAATTAAAGATCATGACTCTACGTCACTCTGTTAAAAAGCAAGCTGAGACAACTTTAACTTATCTTCATGAATGGAGCAAGGTACAGAGTGAAATTAGAGCTCGCCGAATCTGTATGGTGACAGAAGACAGGATCAGACGGAAGAAGCTAGAGTCACAACAAAAACTTGAGGCAGAGCTCCATGATCTAGAGGTTGAATGGTGTGGTGGCCCTGAAACCATGGAGGAAATCCTTGCAAGGATACATTACAGAGAAGAAGCAGCAGTAAAACGGGAAAGAGCCCTTGCATATGCCTTTTCTCATCAATGGAGATCCAATTCTACACAGAACCAAGGGCTGGGAAATTATGAACTTAACAAAGCTAACTGGGGTTGGAGCTGGAAGGACCGCTGGATCGCCGCTCGCCCATGGGAAAGCCGTGTTGGCAATACACCTCCTAGAAAGTCTCAAACTAAGCAAGCTAGCAAGGTTCAAAAGTACAGGAACTCTTCAACATCTAAAAGTGCTGTTTCAGTTAAGCCAACAATGGCTAATCCAAAAGCTAGGAGATTGTCTTACTCAGACATAGAGAAAACTGTGACACATGAAGTAAAGCTATAA 909 0.4224 MFEEAGLLTSRMGSCNCFKTMICLGKSKGSSKKAKGDLPSGKLSAVESNNHRGKGFSGVENGIKSESLVLPGVSVETIAATKIQTAYRAYKARKSLRRLKGFAKLKIMTLRHSVKKQAETTLTYLHEWSKVQSEIRARRICMVTEDRIRRKKLESQQKLEAELHDLEVEWCGGPETMEEILARIHYREEAAVKRERALAYAFSHQWRSNSTQNQGLGNYELNKANWGWSWKDRWIAARPWESRVGNTPPRKSQTKQASKVQKYRNSSTSKSAVSVKPTMANPKARRLSYSDIEKTVTHEVKL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2162 302 PANTHER IQ-DOMAIN 5-RELATED 65 273 - -
Prci11g2162 302 Coils Coil 149 169 - -
Prci11g2162 302 MobiDBLite consensus disorder prediction 246 276 - -
Prci11g2162 302 MobiDBLite consensus disorder prediction 241 290 - -
Prci11g2162 302 ProSiteProfiles IQ motif profile. 76 104 IPR000048 GO:0005515
Prci11g2162 302 MobiDBLite consensus disorder prediction 28 49 - -
Prci11g2162 302 Pfam IQ calmodulin-binding motif 79 97 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2162 Prci-Chr11 20858142 20862828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2162 12 289 IQD Protein Family AT2G33990 52.669 1.81e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2162 - - gmx:100813685 391.349