Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2160 ATGGGTTCATGCAATTGTTTTAAGACAATGATTTGCTTAGGAAAGTCAAAAGGTAGTTCAAAGAAAGCAAAGGGAGATCTACCTTCAGGGAAACTCAGTGCAGTGGAGTCAAACAATCACAGAGGAAAAGGTTTTAGTGGTGTAGAGAATGGTATTAAAAGTGAAAGTCTGGTGTTACCTGGGGTCTCAGTTGAAACAATTGCTGCAACAAAAATCCAAACAGCATATCGGGCTTATAAGGCAAGAAAATCTCTGCGTCGTTTGAAAGGGTTTGCAAAATTAAAGATCATGACTCTACGTCACTCTGTTAAAAAGCAAGCTGAGACAACTTTAACTTATCTTCATGAATGGAGCAAGGTACAGAGTGAAATTAGAGCTCGCCGAATCTGTATGGTGACAGAAGACAGGATCAGACGGAAGAAGCTAGAGTCACAACAAAAACTTGAGGCAGAGCTCCATGATCTAGAGGTTGAATGGTGTGGTGGCCCTGAAACCATGGAGGAAATCCTTGCAAGGATACATTACAGAGAAGAAGCAGCAGTAAAACGGGAAAGAGCCCTTGCATATGCCTTTTCTCATCAATGGAGATCCAATTCTACACAGAACCAAGGGCTGGGAAATTATGAACTTAACAAAGCTAACTGGGGTTGGAGCTGGAAGGACCGCTGGATCGCCGCTCGCCCATGGGAAAGCCGTGTTGGCAATACACCTCCTAGAAAGTCTCAAACTAAGCAAGCTAGCAAGGTTCAAAAGTACAGGAACTCTTCAACATCTAAAAGTGCTGTTTCAGTTAAGCCAACAATGGCTAATCCAAAAGCTAGGAGATTGTCTTACTCAGACATAGAGAAAACTGTGACACATGAAGTAAAGCTATAA 876 0.4224 MGSCNCFKTMICLGKSKGSSKKAKGDLPSGKLSAVESNNHRGKGFSGVENGIKSESLVLPGVSVETIAATKIQTAYRAYKARKSLRRLKGFAKLKIMTLRHSVKKQAETTLTYLHEWSKVQSEIRARRICMVTEDRIRRKKLESQQKLEAELHDLEVEWCGGPETMEEILARIHYREEAAVKRERALAYAFSHQWRSNSTQNQGLGNYELNKANWGWSWKDRWIAARPWESRVGNTPPRKSQTKQASKVQKYRNSSTSKSAVSVKPTMANPKARRLSYSDIEKTVTHEVKL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2160 291 MobiDBLite consensus disorder prediction 276 291 - -
Prci11g2160 291 PANTHER IQ-DOMAIN 5-RELATED 54 262 - -
Prci11g2160 291 ProSiteProfiles IQ motif profile. 65 93 IPR000048 GO:0005515
Prci11g2160 291 MobiDBLite consensus disorder prediction 17 39 - -
Prci11g2160 291 Coils Coil 138 158 - -
Prci11g2160 291 MobiDBLite consensus disorder prediction 230 291 - -
Prci11g2160 291 Pfam IQ calmodulin-binding motif 68 86 IPR000048 GO:0005515
Prci11g2160 291 MobiDBLite consensus disorder prediction 235 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2160 Prci-Chr11 20858142 20864555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2160 1 278 IQD Protein Family AT2G33990 52.669 1.48e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2160 - - gmx:100813685 391.349