Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2152 ATGACCCTTTCTGAGTCATCATCTTCTTTACTGAGGTCGTCCTTGGGAAGCACTGTAGCTCTGGCACTACATGTAGCTTCCTTAATATCATTCATTAACAGCACCACAGGTTGCCACCATCACTACTTCACATCCATCTTCAGCTTCGGTGACTCGCTTGCTGATACCGGAAACTTGTACTTCAGCTCCCAACCACCACCGTTCCATTATAGCTTCTTCCCTCCCTTCGGCCAATCCTACTTCGGTCGTCCCACCGGGAGGTGCTCTGATGGCCGTCTTATCGTCGATTTCATTGCTGAGTCTCTGGGGATTCAATTATTGAAACCATATTTGGGAATCAAGAATGGACAAATACAAAATTGGACGGTAGAAGAGGGAGTGAATTTCGCAGTTTCAGGAGCAACAGCTCTGAATGCAGATTTCTTTGAAGAAAAGGGTATTCGTAGTTTGTTCACCAACAATTCTCTAAGCATTCAATTGAGTTGGTTCAAGGAGTTATTGCTTTCCCTTTGCAATTCTTATTCAAGCTGTAAAAAAGTTCTTGAGAAGTCATTATTTCTGGTAGGAGAAATCGGAGGCAATGACTTTAATAGACCTCTTCTTGTGCGAAGGAGCCTAGAAGAGATTACAACATTCGTGCCTCATGTGATTAATGTAATCTCATCAACAATACGTGAGTTGATTGATCTAGGGGCTCATACCCTAATGGTTCCAGGAAATTTTCCGATAGGATGCACTCCATTGTACTTAACAATGTATGAGAGCAAAGATAAGAATGATTATGATGAAGCTGGTTGCCTGAAATGGTTAAACAAGTTTACTGAGTACTACAATGAAAGGCTCCAAGCTGAACTGAATCAGATTCAAGTGCTTCATCCTCAAGCCAAAATTATCTATGCTGATTATTACAATGCTGCTTTGCCATTATATCATTTTCCTACAAATTTTGGTTTTTCAGGTCTGAAAGCTTGTTGTGGAAGTGAAGGTCCATACAAGTTCAATGCTTCTTCACGAAAATGTGGGGAACCAGGGGTGAATGCTTGTGACGATCCTTCAAAGTACATTAGCTGGGACGGTATTCATATGACAGAGGCAGCACATAGATGGATTGTCAAAGGTTTAACAAATGAACACTGCGATGCTGCTGAATTTAGTACCTTACGTGGTCTGATAAATAATAATGTTCAATTTGAATGTTTAATTTAG 1206 0.408 MTLSESSSSLLRSSLGSTVALALHVASLISFINSTTGCHHHYFTSIFSFGDSLADTGNLYFSSQPPPFHYSFFPPFGQSYFGRPTGRCSDGRLIVDFIAESLGIQLLKPYLGIKNGQIQNWTVEEGVNFAVSGATALNADFFEEKGIRSLFTNNSLSIQLSWFKELLLSLCNSYSSCKKVLEKSLFLVGEIGGNDFNRPLLVRRSLEEITTFVPHVINVISSTIRELIDLGAHTLMVPGNFPIGCTPLYLTMYESKDKNDYDEAGCLKWLNKFTEYYNERLQAELNQIQVLHPQAKIIYADYYNAALPLYHFPTNFGFSGLKACCGSEGPYKFNASSRKCGEPGVNACDDPSKYISWDGIHMTEAAHRWIVKGLTNEHCDAAEFSTLRGLINNNVQFECLI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2152 401 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 24 375 - -
Prci11g2152 401 SUPERFAMILY SGNH hydrolase 46 374 - -
Prci11g2152 401 Pfam GDSL-like Lipase/Acylhydrolase 46 371 IPR001087 GO:0016788
Prci11g2152 401 CDD SGNH_plant_lipase_like 44 374 IPR035669 -
Prci11g2152 401 Gene3D SGNH hydrolase 35 378 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2152 Prci-Chr11 20732530 20739722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2152 23 372 Pollen Coat Proteome AT1G75930 29.508 1.03e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2152 - - qsa:O6P43_012744 454.907