Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2080 ATGATACATGAAATCTTCATAATCACCTTCCTTGGCCTTTTTCTTCTTCTATCATATTTTCTTAGAGCTTTCGATCTTCCGATCTCCATCGACCACAGTCCATATAGTGATTCCTGTGGACTTGTCTTCCACGTGTCTACTGATTCATATAATCTCGGACCCTGCAGCGATCCTAGTTACGAACTAGTCTGTGAGAAAAACAGAACATTGTTACATTTAATCTATGGAAGGCACTTAGTTCAGACCATTTATGCCATTAACTCCACCACCGTCAAATCCATCGCCGGTGGAGTTGACGATGACAACTGCTATGCAATCACTCGTCATTCTCTCCCATACAGCAACTTCAGCCACGTTTTCTCTGACAAATATTATTCTTCTGTTGTGGGTGGATTAGTGTTGTTCAGCTGCGAAAATCCAGTTCTCTCTCTAAGTGATAATGATGCTGTTGTGCAGTTTTGTTCAAGCAGTGAAGAGCCAAAAACGCCTTATTCTTATTTGCTGAAGGCACAGGATCTAAGCGTATCTGCTGTGGCAGAGTCGTGTAAAATAGATTTGATGGTGAAGGTGTCGCCATGGGGACCAATGACATGTAATGAGAATTGTTCATATCCACAAGTTCAGAGCGAAGAGATTAAAGGGATTGAGATCAAATGGCGACCAAATCGTTGTGGCGTGTGGGAAGGAGAGAAAGGTAATAACTGCCGGTTTGAAAATACCACAAATATGGTTCTCTGTCATCCTCGGATTGAAGAATTTGGTGTTTCTGAATTTCTTTTGGAATTGGTTTCGAAGTGTCTATTTGCAGTGACGCTCTGGTCTGCAGCTAAATTTGTACTAGGTGCCCCGTGTGCTTTTATATTCTTGATTCGTCGATGGAGGAGAAGGCATCAATCTTATGATGACAATGTTGAGGACTTCCTCCAAAATAATAGCAATTTGATGCCCATAAAGTACTCTTACTCAGAGGTCAAGAAAATGACTAATGGCTTCAAACACAAGTTAGGTGAAGGAGGCTATGGTTATGTCTATAAAGGTAAGCTTCGAAGCAATCGTGATGTAGCTGTCAAGTTACTGGGAAAGTCCAAAACCAATGCACAAGATTTCATCAGTGAAGTCGCCACTATTGGCAGGATTCATCATGTCAATGTGGTGCAGCTAATCGGGTTCTGTGCTGAAAGAAACAAGAGAGCTCTTGTTTATGAGTTCATGTCTAATGGATCTCTTGACAAGTACATTTTCTCAGAGAAACAGCGGAACGCGTTGATCAATTTTGAAAAAATATTTAATATTTCTCTAGGGATTGCCCGAGGAATTGAATATTTACATCGAGGATGTGATATGCAAATTCTACACTTCGATATCAAACCCCACAATATCCTACTTGATGAGAACTTTAATCCAAAAGTTTCAGATTTTGGATTGGCAAAGTTGTATCCATTAGAAAATAGTATTGTATCTTTGACAAATGCAAGGGGAACATTTGGATACATGGCGCCTGAATTTTTGTACAAGAACATTGGAGGGATATCACACAAATCTGATGTTTATAGTTTTGGGATGTTGTTGATGGAAATGGCTGGGAGAAGAAAGAACACGAATGTCATTGAACATTCTTGGCAAACATATTTTGCCAAATGGGTCTATGACCAATTTGAGGAAATAATAGATGAGGGTAATACCTCTAACGAGGAAAGGGAAATTGCAAAGAAGATGATTACAATAGCTTCACATTGCATACAAATGTATCCTGGTGATCGACCCTCGATGAAGGAAGTGATAGAGATGCTTGTGGGAGAAATTGAGCTCCAAGAAGCTTTGCCACCCTAA 1830 0.4005 MIHEIFIITFLGLFLLLSYFLRAFDLPISIDHSPYSDSCGLVFHVSTDSYNLGPCSDPSYELVCEKNRTLLHLIYGRHLVQTIYAINSTTVKSIAGGVDDDNCYAITRHSLPYSNFSHVFSDKYYSSVVGGLVLFSCENPVLSLSDNDAVVQFCSSSEEPKTPYSYLLKAQDLSVSAVAESCKIDLMVKVSPWGPMTCNENCSYPQVQSEEIKGIEIKWRPNRCGVWEGEKGNNCRFENTTNMVLCHPRIEEFGVSEFLLELVSKCLFAVTLWSAAKFVLGAPCAFIFLIRRWRRRHQSYDDNVEDFLQNNSNLMPIKYSYSEVKKMTNGFKHKLGEGGYGYVYKGKLRSNRDVAVKLLGKSKTNAQDFISEVATIGRIHHVNVVQLIGFCAERNKRALVYEFMSNGSLDKYIFSEKQRNALINFEKIFNISLGIARGIEYLHRGCDMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPLENSIVSLTNARGTFGYMAPEFLYKNIGGISHKSDVYSFGMLLMEMAGRRKNTNVIEHSWQTYFAKWVYDQFEEIIDEGNTSNEEREIAKKMITIASHCIQMYPGDRPSMKEVIEMLVGEIELQEALPP 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2080 609 SMART serkin_6 329 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2080 609 Gene3D Phosphorylase Kinase; domain 1 303 403 - -
Prci11g2080 609 FunFam serine/threonine-protein kinase PBS1-like 297 403 - -
Prci11g2080 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Prci11g2080 609 CDD STKc_IRAK 335 597 - -
Prci11g2080 609 FunFam PR5-like receptor kinase 404 607 - -
Prci11g2080 609 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Prci11g2080 609 Gene3D Transferase(Phosphotransferase) domain 1 404 606 - -
Prci11g2080 609 ProSiteProfiles Protein kinase domain profile. 329 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2080 609 Pfam Protein kinase domain 332 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2080 609 SUPERFAMILY Protein kinase-like (PK-like) 307 597 IPR011009 -
Prci11g2080 609 PANTHER RUST RESISTANCE KINASE LR10-RELATED 298 604 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2080 Prci-Chr11 18564239 18567082 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2080 295 608 Receptor kinase-like Gene Family AT5G38280 52.012 2.48e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci11g2080 Pkinase 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2080 - - tpra:123914142 555.829